RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 LZTR1Q8N653 840 aa19.84■□□□□ 0.77
SREBF1-216ENST00000490796 WDR36Q8NI36 951 aaKnown RBP19.84■□□□□ 0.77
SREBF1-216ENST00000490796 FNIP1Q8TF40 1166 aa19.84■□□□□ 0.77
SREBF1-216ENST00000490796 CCDC97Q96F63 343 aaPredicted RBP19.84■□□□□ 0.77
SREBF1-216ENST00000490796 SYT11Q9BT88 431 aa19.84■□□□□ 0.77
SREBF1-216ENST00000490796 MYO1AQ9UBC5 1043 aa19.84■□□□□ 0.77
SREBF1-216ENST00000490796 SEPT3Q9UH03 358 aa19.84■□□□□ 0.77
SREBF1-216ENST00000490796 H3BRJ5 948 aa19.83■□□□□ 0.77
SREBF1-216ENST00000490796 CELA2BP08218 269 aaPredicted RBP19.83■□□□□ 0.77
SREBF1-216ENST00000490796 MYBL1P10243 752 aa19.83■□□□□ 0.77
SREBF1-216ENST00000490796 ARL4AP40617 200 aa19.83■□□□□ 0.77
SREBF1-216ENST00000490796 RGRP47804 291 aa19.83■□□□□ 0.77
SREBF1-216ENST00000490796 AP1S1P61966 158 aa19.83■□□□□ 0.77
SREBF1-216ENST00000490796 NSUN2Q08J23 767 aaKnown RBP eCLIP19.83■□□□□ 0.77
SREBF1-216ENST00000490796 ZNF235Q14590 738 aa19.83■□□□□ 0.77
SREBF1-216ENST00000490796 AGERQ15109 404 aa19.83■□□□□ 0.77
SREBF1-216ENST00000490796 ZNF571Q7Z3V5 609 aaPredicted RBP19.83■□□□□ 0.77
SREBF1-216ENST00000490796 LSM14AQ8ND56 463 aaKnown RBP19.83■□□□□ 0.77
SREBF1-216ENST00000490796 OR6C4Q8NGE1 309 aa19.83■□□□□ 0.77
SREBF1-216ENST00000490796 PEBP4Q96S96 227 aa19.83■□□□□ 0.77
SREBF1-216ENST00000490796 BPIFA3Q9BQP9 254 aa19.83■□□□□ 0.77
SREBF1-216ENST00000490796 DPH1Q9BZG8 443 aa19.83■□□□□ 0.77
SREBF1-216ENST00000490796 ASCL3Q9NQ33 180 aa19.83■□□□□ 0.77
SREBF1-216ENST00000490796 AIPL1Q9NZN9 384 aa19.83■□□□□ 0.77
SREBF1-216ENST00000490796 MOSPD1Q9UJG1 213 aa19.83■□□□□ 0.77
SREBF1-216ENST00000490796 CCDC187A0A096LP49 1063 aa19.82■□□□□ 0.76
SREBF1-216ENST00000490796 A0A1W2PQC6 194 aa19.82■□□□□ 0.76
SREBF1-216ENST00000490796 RECQL5O94762 991 aaPredicted RBP19.82■□□□□ 0.76
SREBF1-216ENST00000490796 NFKBIAP25963 317 aa19.82■□□□□ 0.76
SREBF1-216ENST00000490796 HCAR3P49019 387 aa19.82■□□□□ 0.76
SREBF1-216ENST00000490796 LBRQ14739 615 aaKnown RBP19.82■□□□□ 0.76
SREBF1-216ENST00000490796 ACOX1Q15067 660 aa19.82■□□□□ 0.76
SREBF1-216ENST00000490796 TAF1BQ53T94 588 aaPredicted RBP19.82■□□□□ 0.76
SREBF1-216ENST00000490796 TMCO4Q5TGY1 634 aa19.82■□□□□ 0.76
SREBF1-216ENST00000490796 IGF2-ASQ6U949 168 aa19.82■□□□□ 0.76
SREBF1-216ENST00000490796 ZSWIM9Q86XI8 627 aa19.82■□□□□ 0.76
SREBF1-216ENST00000490796 ARHGAP12Q8IWW6 846 aa19.82■□□□□ 0.76
SREBF1-216ENST00000490796 BBS5Q8N3I7 341 aa19.82■□□□□ 0.76
SREBF1-216ENST00000490796 ARFGAP1Q8N6T3 406 aa19.82■□□□□ 0.76
SREBF1-216ENST00000490796 KYQ8NBH2 561 aa19.82■□□□□ 0.76
SREBF1-216ENST00000490796 NSMCE1Q8WV22 266 aa19.82■□□□□ 0.76
SREBF1-216ENST00000490796 CCDC74AQ96AQ1 378 aa19.82■□□□□ 0.76
SREBF1-216ENST00000490796 SLC46A1Q96NT5 459 aa19.82■□□□□ 0.76
SREBF1-216ENST00000490796 GFM1Q96RP9 751 aaKnown RBP19.82■□□□□ 0.76
SREBF1-216ENST00000490796 TRIM7Q9C029 511 aa19.82■□□□□ 0.76
SREBF1-216ENST00000490796 WDR70Q9NW82 654 aa19.82■□□□□ 0.76
SREBF1-216ENST00000490796 PCDHGA8Q9Y5G5 932 aa19.82■□□□□ 0.76
SREBF1-216ENST00000490796 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.81■□□□□ 0.76
SREBF1-216ENST00000490796 TMX2-CTNND1H3BSU7 103 aa19.81■□□□□ 0.76
SREBF1-216ENST00000490796 LRCH4O75427 683 aa19.81■□□□□ 0.76
SREBF1-216ENST00000490796 SERPINC1P01008 464 aa19.81■□□□□ 0.76
SREBF1-216ENST00000490796 PRKCIP41743 596 aa19.81■□□□□ 0.76
SREBF1-216ENST00000490796 ARHGAP40Q5TG30 622 aa19.81■□□□□ 0.76
SREBF1-216ENST00000490796 AFMIDQ63HM1 303 aa19.81■□□□□ 0.76
SREBF1-216ENST00000490796 ARHGAP36Q6ZRI8 547 aa19.81■□□□□ 0.76
SREBF1-216ENST00000490796 TAF8Q7Z7C8 310 aa19.81■□□□□ 0.76
SREBF1-216ENST00000490796 NPWQ8N729 165 aa19.81■□□□□ 0.76
SREBF1-216ENST00000490796 OR56A4Q8NGH8 313 aa19.81■□□□□ 0.76
SREBF1-216ENST00000490796 PDCD6IPQ8WUM4 868 aaKnown RBP19.81■□□□□ 0.76
SREBF1-216ENST00000490796 ZNF599Q96NL3 588 aa19.81■□□□□ 0.76
SREBF1-216ENST00000490796 PSKH2Q96QS6 385 aa19.81■□□□□ 0.76
SREBF1-216ENST00000490796 STRADBQ9C0K7 418 aa19.81■□□□□ 0.76
SREBF1-216ENST00000490796 EPB41L5Q9HCM4 733 aa19.81■□□□□ 0.76
SREBF1-216ENST00000490796 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.81■□□□□ 0.76
SREBF1-216ENST00000490796 CWC15Q9P013 229 aaKnown RBP19.81■□□□□ 0.76
SREBF1-216ENST00000490796 BPTFQ12830 3046 aa19.81■□□□□ 0.76
SREBF1-216ENST00000490796 A0A1W2PQ67 120 aa19.8■□□□□ 0.76
SREBF1-216ENST00000490796 A8MX80 341 aa19.8■□□□□ 0.76
SREBF1-216ENST00000490796 PDE2AO00408 941 aaPredicted RBP19.8■□□□□ 0.76
SREBF1-216ENST00000490796 DDX3XO00571 662 aaKnown RBP eCLIP19.8■□□□□ 0.76
SREBF1-216ENST00000490796 TNFSF15O95150 251 aa19.8■□□□□ 0.76
SREBF1-216ENST00000490796 PRB1P04280 392 aa19.8■□□□□ 0.76
SREBF1-216ENST00000490796 PCK1P35558 622 aa19.8■□□□□ 0.76
SREBF1-216ENST00000490796 MLLT3P42568 568 aaPredicted RBP19.8■□□□□ 0.76
SREBF1-216ENST00000490796 ZNF165P49910 485 aa19.8■□□□□ 0.76
SREBF1-216ENST00000490796 KIAA1024LP59773 190 aa19.8■□□□□ 0.76
SREBF1-216ENST00000490796 BOLA3Q53S33 107 aa19.8■□□□□ 0.76
SREBF1-216ENST00000490796 TDRD12Q587J7 1177 aaKnown RBP19.8■□□□□ 0.76
SREBF1-216ENST00000490796 TMCO3Q6UWJ1 677 aa19.8■□□□□ 0.76
SREBF1-216ENST00000490796 LIPIQ6XZB0 460 aa19.8■□□□□ 0.76
SREBF1-216ENST00000490796 DPPA4Q7L190 304 aa19.8■□□□□ 0.76
SREBF1-216ENST00000490796 PLA2G15Q8NCC3 412 aa19.8■□□□□ 0.76
SREBF1-216ENST00000490796 HSPH1Q92598 858 aa19.8■□□□□ 0.76
SREBF1-216ENST00000490796 ECHDC3Q96DC8 303 aa19.8■□□□□ 0.76
SREBF1-216ENST00000490796 PDXPQ96GD0 296 aa19.8■□□□□ 0.76
SREBF1-216ENST00000490796 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.8■□□□□ 0.76
SREBF1-216ENST00000490796 WDR26Q9H7D7 661 aa19.8■□□□□ 0.76
SREBF1-216ENST00000490796 CPNE5Q9HCH3 593 aa19.8■□□□□ 0.76
SREBF1-216ENST00000490796 TMEM63CQ9P1W3 806 aa19.8■□□□□ 0.76
SREBF1-216ENST00000490796 DGKBQ9Y6T7 804 aa19.8■□□□□ 0.76
SREBF1-216ENST00000490796 RPLP0P05388 317 aaKnown RBP19.79■□□□□ 0.76
SREBF1-216ENST00000490796 SKILP12757 684 aa19.79■□□□□ 0.76
SREBF1-216ENST00000490796 HSPA9P38646 679 aaKnown RBP19.79■□□□□ 0.76
SREBF1-216ENST00000490796 TPM4P67936 248 aa19.79■□□□□ 0.76
SREBF1-216ENST00000490796 RALGDSQ12967 914 aa19.79■□□□□ 0.76
SREBF1-216ENST00000490796 SMTNL2Q2TAL5 461 aa19.79■□□□□ 0.76
SREBF1-216ENST00000490796 FAM46DQ8NEK8 389 aa19.79■□□□□ 0.76
SREBF1-216ENST00000490796 OR1E3Q8WZA6 343 aa19.79■□□□□ 0.76
SREBF1-216ENST00000490796 FUBP1Q96AE4 644 aaKnown RBP19.79■□□□□ 0.76
SREBF1-216ENST00000490796 RBM15Q96T37 977 aaKnown RBP eCLIP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms