RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 PAFAH1B3Q15102 231 aaKnown RBP31.52■■■□□ 2.64
LDB1-204ENST00000490751 PDK2Q15119 407 aa31.52■■■□□ 2.64
LDB1-204ENST00000490751 ANKRD20A8PQ5CZ79 823 aa31.52■■■□□ 2.64
LDB1-204ENST00000490751 PRRT3Q5FWE3 981 aa31.52■■■□□ 2.64
LDB1-204ENST00000490751 FAXCQ5TGI0 409 aa31.52■■■□□ 2.64
LDB1-204ENST00000490751 LRRC49Q8IUZ0 686 aa31.52■■■□□ 2.64
LDB1-204ENST00000490751 PDCD6IPQ8WUM4 868 aaKnown RBP31.52■■■□□ 2.64
LDB1-204ENST00000490751 CCDC42Q96M95 316 aa31.52■■■□□ 2.64
LDB1-204ENST00000490751 APOOQ9BUR5 198 aa31.52■■■□□ 2.64
LDB1-204ENST00000490751 LRRC61Q9BV99 259 aa31.52■■■□□ 2.64
LDB1-204ENST00000490751 SLC13A1Q9BZW2 595 aa31.52■■■□□ 2.64
LDB1-204ENST00000490751 NHEJ1Q9H9Q4 299 aaPredicted RBP31.52■■■□□ 2.64
LDB1-204ENST00000490751 EVA1BQ9NVM1 165 aa31.52■■■□□ 2.64
LDB1-204ENST00000490751 DKK4Q9UBT3 224 aa31.52■■■□□ 2.64
LDB1-204ENST00000490751 LRP4O75096 1905 aa31.51■■■□□ 2.64
LDB1-204ENST00000490751 A8MX80 341 aa31.51■■■□□ 2.63
LDB1-204ENST00000490751 RECQL5O94762 991 aaPredicted RBP31.51■■■□□ 2.63
LDB1-204ENST00000490751 PPARDQ03181 441 aa31.51■■■□□ 2.63
LDB1-204ENST00000490751 CYP4F3Q08477 520 aa31.51■■■□□ 2.63
LDB1-204ENST00000490751 GALNT2Q10471 571 aa31.51■■■□□ 2.63
LDB1-204ENST00000490751 MTM1Q13496 603 aa31.51■■■□□ 2.63
LDB1-204ENST00000490751 C1orf61Q13536 156 aa31.51■■■□□ 2.63
LDB1-204ENST00000490751 NFATC4Q14934 902 aa31.51■■■□□ 2.63
LDB1-204ENST00000490751 SPOCK2Q92563 424 aa31.51■■■□□ 2.63
LDB1-204ENST00000490751 TBATAQ96M53 351 aa31.51■■■□□ 2.63
LDB1-204ENST00000490751 IL12RB2Q99665 862 aa31.51■■■□□ 2.63
LDB1-204ENST00000490751 USP29Q9HBJ7 922 aa31.51■■■□□ 2.63
LDB1-204ENST00000490751 B4GALT6Q9UBX8 382 aa31.51■■■□□ 2.63
LDB1-204ENST00000490751 OR1A2Q9Y585 309 aa31.51■■■□□ 2.63
LDB1-204ENST00000490751 A0A1W2PQ67 120 aa31.5■■■□□ 2.63
LDB1-204ENST00000490751 GCATO75600 419 aa31.5■■■□□ 2.63
LDB1-204ENST00000490751 MAP3K6O95382 1288 aa31.5■■■□□ 2.63
LDB1-204ENST00000490751 CPP00450 1065 aa31.5■■■□□ 2.63
LDB1-204ENST00000490751 GARSP41250 739 aaKnown RBP31.5■■■□□ 2.63
LDB1-204ENST00000490751 DUSP3P51452 185 aaPredicted RBP31.5■■■□□ 2.63
LDB1-204ENST00000490751 TRAF2Q12933 501 aa31.5■■■□□ 2.63
LDB1-204ENST00000490751 MESDQ14696 234 aa31.5■■■□□ 2.63
LDB1-204ENST00000490751 RALGPS1Q5JS13 557 aa31.5■■■□□ 2.63
LDB1-204ENST00000490751 ZFYVE27Q5T4F4 411 aa31.5■■■□□ 2.63
LDB1-204ENST00000490751 MAP7D3Q8IWC1 876 aa31.5■■■□□ 2.63
LDB1-204ENST00000490751 NT5MQ9NPB1 228 aa31.5■■■□□ 2.63
LDB1-204ENST00000490751 CLCA2Q9UQC9 943 aa31.5■■■□□ 2.63
LDB1-204ENST00000490751 ZFHX4Q86UP3 3567 aa31.5■■■□□ 2.63
LDB1-204ENST00000490751 TPP1O14773 563 aa31.49■■■□□ 2.63
LDB1-204ENST00000490751 HTR1BP28222 390 aa31.49■■■□□ 2.63
LDB1-204ENST00000490751 ENPP7Q6UWV6 458 aa31.49■■■□□ 2.63
LDB1-204ENST00000490751 TEX26Q8N6G2 289 aa31.49■■■□□ 2.63
LDB1-204ENST00000490751 PLA2G15Q8NCC3 412 aa31.49■■■□□ 2.63
LDB1-204ENST00000490751 SLC35G2Q8TBE7 412 aa31.49■■■□□ 2.63
LDB1-204ENST00000490751 FAF2Q96CS3 445 aa31.49■■■□□ 2.63
LDB1-204ENST00000490751 SALL4Q9UJQ4 1053 aa31.49■■■□□ 2.63
LDB1-204ENST00000490751 CFAP47Q6ZTR5 3102 aa31.49■■■□□ 2.63
LDB1-204ENST00000490751 TSHRP16473 764 aa31.48■■■□□ 2.63
LDB1-204ENST00000490751 GM2AP17900 193 aa31.48■■■□□ 2.63
LDB1-204ENST00000490751 BLKP51451 505 aa31.48■■■□□ 2.63
LDB1-204ENST00000490751 ALG11Q2TAA5 492 aa31.48■■■□□ 2.63
LDB1-204ENST00000490751 HID1Q8IV36 788 aa31.48■■■□□ 2.63
LDB1-204ENST00000490751 CNGA4Q8IV77 575 aa31.48■■■□□ 2.63
LDB1-204ENST00000490751 TSACCQ96A04 125 aaPredicted RBP31.48■■■□□ 2.63
LDB1-204ENST00000490751 NXPE2Q96DL1 559 aa31.48■■■□□ 2.63
LDB1-204ENST00000490751 CLPBQ9H078 707 aa31.48■■■□□ 2.63
LDB1-204ENST00000490751 LMO7DNF2Z398 122 aa31.47■■■□□ 2.63
LDB1-204ENST00000490751 GP1BAP07359 652 aa31.47■■■□□ 2.63
LDB1-204ENST00000490751 HK3P52790 923 aa31.47■■■□□ 2.63
LDB1-204ENST00000490751 ACOX1Q15067 660 aa31.47■■■□□ 2.63
LDB1-204ENST00000490751 CDKN3Q16667 212 aa31.47■■■□□ 2.63
LDB1-204ENST00000490751 CACTIN-AS1Q8N1I8 211 aa31.47■■■□□ 2.63
LDB1-204ENST00000490751 PQLC3Q8N755 202 aa31.47■■■□□ 2.63
LDB1-204ENST00000490751 IFI44Q8TCB0 444 aa31.47■■■□□ 2.63
LDB1-204ENST00000490751 NCKIPSDQ9NZQ3 722 aa31.47■■■□□ 2.63
LDB1-204ENST00000490751 PHTF1Q9UMS5 762 aa31.47■■■□□ 2.63
LDB1-204ENST00000490751 PKD1L2Q7Z442 2459 aa31.47■■■□□ 2.63
LDB1-204ENST00000490751 AKR1B15C9JRZ8 316 aaPredicted RBP31.46■■■□□ 2.63
LDB1-204ENST00000490751 OPA1O60313 960 aa31.46■■■□□ 2.63
LDB1-204ENST00000490751 RASGRP1O95267 797 aa31.46■■■□□ 2.63
LDB1-204ENST00000490751 MT-CO3P00414 261 aa31.46■■■□□ 2.63
LDB1-204ENST00000490751 ANXA6P08133 673 aa31.46■■■□□ 2.63
LDB1-204ENST00000490751 VIPR1P32241 457 aa31.46■■■□□ 2.63
LDB1-204ENST00000490751 CNGA3Q16281 694 aa31.46■■■□□ 2.63
LDB1-204ENST00000490751 IFI16Q16666 785 aaKnown RBP31.46■■■□□ 2.63
LDB1-204ENST00000490751 TIGD7Q6NT04 549 aaPredicted RBP31.46■■■□□ 2.63
LDB1-204ENST00000490751 NYAP1Q6ZVC0 841 aa31.46■■■□□ 2.63
LDB1-204ENST00000490751 DCBLD1Q8N8Z6 715 aa31.46■■■□□ 2.63
LDB1-204ENST00000490751 ATL2Q8NHH9 583 aa31.46■■■□□ 2.63
LDB1-204ENST00000490751 RAPGEF5Q92565 580 aa31.46■■■□□ 2.63
LDB1-204ENST00000490751 MAML1Q92585 1016 aa31.46■■■□□ 2.63
LDB1-204ENST00000490751 WDR92Q96MX6 357 aa31.46■■■□□ 2.63
LDB1-204ENST00000490751 SEMA3CQ99985 751 aa31.46■■■□□ 2.63
LDB1-204ENST00000490751 KLQ9UEF7 1012 aa31.46■■■□□ 2.63
LDB1-204ENST00000490751 RAXQ9Y2V3 346 aa31.46■■■□□ 2.63
LDB1-204ENST00000490751 APC2O95996 2303 aa31.46■■■□□ 2.63
LDB1-204ENST00000490751 MATN3O15232 486 aa31.45■■■□□ 2.63
LDB1-204ENST00000490751 PGLSO95336 258 aa31.45■■■□□ 2.63
LDB1-204ENST00000490751 CELA2BP08218 269 aaPredicted RBP31.45■■■□□ 2.63
LDB1-204ENST00000490751 KDELR1P24390 212 aa31.45■■■□□ 2.63
LDB1-204ENST00000490751 NFKBIAP25963 317 aa31.45■■■□□ 2.63
LDB1-204ENST00000490751 GBE1Q04446 702 aa31.45■■■□□ 2.63
LDB1-204ENST00000490751 ITKQ08881 620 aa31.45■■■□□ 2.63
LDB1-204ENST00000490751 TBX2Q13207 712 aaPredicted RBP31.45■■■□□ 2.63
LDB1-204ENST00000490751 ARMC12Q5T9G4 340 aa31.45■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms