RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 FAIMQ9NVQ4 179 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 MAP3K20Q9NYL2 800 aaKnown RBP3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 HEY2Q9UBP5 337 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 SLC7A8Q9UHI5 535 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 EXOC7Q9UPT5 735 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 SORCS3Q9UPU3 1222 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 AGTPBP1Q9UPW5 1226 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 DNM3Q9UQ16 869 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 DMTF1Q9Y222 760 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 R3HDM2Q9Y2K5 976 aaKnown RBP3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 SH3GLB1Q9Y371 365 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 COQ4Q9Y3A0 265 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 SCINQ9Y6U3 715 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 PATJQ8NI35 1801 aa3.53□□□□□ -1.84
CRNKL1-203ENST00000490258 PLXNA3P51805 1871 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 TET1Q8NFU7 2136 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 SF3B1O75533 1304 aaKnown RBP eCLIP3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 IGLV3-22A0A075B6J6 115 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 A0A088AWK7 358 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 C15orf38-AP3S2A0A0A6YYH1 394 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 KANSL1LA0AUZ9 987 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 DENND3A2RUS2 1198 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 CFAP69A5D8W1 941 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 E9PBE3 544 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 SPECC1L-ADORA2AF8WAN1 911 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 H0YJX3 145 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 H3BNX3 289 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 ZNF701M0R085 212 aaPredicted RBP3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 GSTA4O15217 222 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 MSH4O15457 936 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 LIASO43766 372 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 SNNO75324 88 aaPredicted RBP3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 SPAG7O75391 227 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 PROSCO94903 275 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 CSPG5O95196 566 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 GCNT3O95395 438 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 CCNE2O96020 404 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 C1QAP02745 245 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 ICAM1P05362 532 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 CYP3A4P08684 503 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 ZCCHC18P0CG32 403 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 MYCLP1P12525 358 aaPredicted RBP3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 UNGP13051 313 aaPredicted RBP3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 KRT4P19013 534 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 GLRA2P23416 452 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 ABCD1P33897 745 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 IGFALSP35858 605 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 SREBF1P36956 1147 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 ADCY8P40145 1251 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 ADCYAP1R1P41586 468 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 FNTBP49356 437 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 ARFIP2P53365 341 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 ARL4CP56559 192 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 GPX6P59796 221 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 SNRPFP62306 86 aaKnown RBP3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 IRF9Q00978 393 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 SP2Q02086 613 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 PLOD1Q02809 727 aaPredicted RBP3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 PRKCZQ05513 592 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 PPP2R5CQ13362 524 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 MED21Q13503 144 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 CYLC2Q14093 348 aaPredicted RBP3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 CCNIQ14094 377 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 MESDQ14696 234 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 PDK3Q15120 406 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 PGM5Q15124 567 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 OASLQ15646 514 aaKnown RBP3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 LY6KQ17RY6 165 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 KLHL38Q2WGJ6 581 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 TMEM95Q3KNT9 176 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 TEX44Q53QW1 395 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 EFHC1Q5JVL4 640 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 RABGAP1LQ5R372 815 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 GPATCH4Q5T3I0 446 aaKnown RBP3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 C10orf62Q5T681 223 aaPredicted RBP3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 RNASEH2BQ5TBB1 312 aaKnown RBP3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 C6orf163Q5TEZ5 329 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 FKBP1CQ5VVH2 108 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 ACAD10Q6JQN1 1059 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 ZNF280DQ6N043 979 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 RINT1Q6NUQ1 792 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 RGMBQ6NW40 437 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 DUS1LQ6P1R4 473 aaKnown RBP3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 C1orf228Q6PIY5 440 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 B3GNT9Q6UX72 402 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 RAPH1Q70E73 1250 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 ZNF720Q7Z2F6 126 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 ARPINQ7Z6K5 226 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 TTC7BQ86TV6 843 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 CDR2LQ86X02 465 aaPredicted RBP3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 ERO1BQ86YB8 467 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 TICAM1Q8IUC6 712 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 CROCCP3Q8IVE0 287 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 ARHGEF19Q8IW93 802 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 GPR135Q8IZ08 494 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 BBS5Q8N3I7 341 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 ALLCQ8N6M5 410 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 PAF1Q8N7H5 531 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 C2orf69Q8N8R5 385 aa3.52□□□□□ -1.85
CRNKL1-203ENST00000490258 ZBTB8BQ8NAP8 495 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms