RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 ALG11Q2TAA5 492 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 HS1BP3Q53T59 392 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 RALGPS1Q5JS13 557 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 ERAP2Q6P179 960 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 IGF2-ASQ6U949 168 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 PHACTR4Q8IZ21 702 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 RBFAQ8N0V3 343 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 SNIP1Q8TAD8 396 aaKnown RBP9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 GRAMD1AQ96CP6 724 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 NUDCD1Q96RS6 583 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 MGME1Q9BQP7 344 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 APOOQ9BUR5 198 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 NUP85Q9BW27 656 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 CINPQ9BW66 212 aaPredicted RBP9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 SP110Q9HB58 689 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 IFNKQ9P0W0 207 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 DGKBQ9Y6T7 804 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 LRRK1Q38SD2 2015 aa9.78□□□□□ -0.84
TMEM39A-210ENST00000490099 WDFY3Q8IZQ1 3526 aa9.77□□□□□ -0.84
TMEM39A-210ENST00000490099 FASNP49327 2511 aaKnown RBP9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 MYO1FO00160 1098 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 DFFAO00273 331 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 TNFRSF10CO14798 259 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 MAP3K7O43318 606 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 TLX3O43711 291 aaPredicted RBP9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 RECQL5O94762 991 aaPredicted RBP9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 TSHRP16473 764 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 XPAP23025 273 aaPredicted RBP9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 ARL4AP40617 200 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 EIF2S3P41091 472 aaKnown RBP9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 LSSP48449 732 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 SCNN1BP51168 640 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 BLKP51451 505 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 HK3P52790 923 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 PPARDQ03181 441 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 BCL2L1Q07817 233 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 IHHQ14623 411 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 NFATC4Q14934 902 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 PAFAH1B3Q15102 231 aaKnown RBP9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 SMTNL2Q2TAL5 461 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 PRRT3Q5FWE3 981 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 KCTD16Q68DU8 428 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 ALG1LQ6GMV1 187 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 OGFOD3Q6PK18 319 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 TMCO3Q6UWJ1 677 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 DPPA4Q7L190 304 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 SLC35F3Q8IY50 421 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 FSTL5Q8N475 847 aaPredicted RBP9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 TPCN2Q8NHX9 752 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 LMX1AQ8TE12 382 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 CPLX3Q8WVH0 158 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 FUBP1Q96AE4 644 aaKnown RBP9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 FAF2Q96CS3 445 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 BTBD6Q96KE9 485 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 COQ10AQ96MF6 247 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 TSGA13Q96PP4 275 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 MCCC1Q96RQ3 725 aaPredicted RBP9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 RBM15Q96T37 977 aaKnown RBP eCLIP9.77□□□□□ -0.852e-7■■■■□ 21.6
TMEM39A-210ENST00000490099 DNAJC7Q99615 494 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 IL12RB2Q99665 862 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 SLC13A1Q9BZW2 595 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 NOD2Q9HC29 1040 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 EVA1BQ9NVM1 165 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 APOBEC3BQ9UH17 382 aaKnown RBP9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 ANAPC7Q9UJX3 599 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 COQ6Q9Y2Z9 468 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 IGSF10Q6WRI0 2623 aa9.77□□□□□ -0.85
TMEM39A-210ENST00000490099 A0A1W2PNU3 283 aaPredicted RBP9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 SSU72P8A0A1W2PR75 194 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 GOLGA6L19H0YKK7 550 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 FZD6O60353 706 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 PROSCO94903 275 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 RASGRP1O95267 797 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 PRKCGP05129 697 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 CD48P09326 243 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 TGM2P21980 687 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 CASP14P31944 242 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 ADKP55263 362 aaKnown RBP9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 CDH6P55285 790 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 KIAA1024LP59773 190 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 GALNT2Q10471 571 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 C1orf61Q13536 156 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 NR0B2Q15466 257 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 SLC18A3Q16572 532 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 ISXQ2M1V0 245 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 COL28A1Q2UY09 1125 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 DEFB133Q30KQ1 61 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 TDRD12Q587J7 1177 aaKnown RBP9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 CCDC122Q5T0U0 273 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 FAXCQ5TGI0 409 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 ESRP1Q6NXG1 681 aaKnown RBP9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 GUSBP11Q6P575 273 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 C19orf48Q6RUI8 117 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 NYAP1Q6ZVC0 841 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 PDZD3Q86UT5 571 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 PLA2G15Q8NCC3 412 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 OR8K1Q8NGG5 319 aa9.76□□□□□ -0.85
TMEM39A-210ENST00000490099 PCDH19Q8TAB3 1148 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms