RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 BORAQ6PGQ7 559 aa14.05□□□□□ -0.16
VARS-227ENST00000489979 PHLDB2Q86SQ0 1253 aa14.05□□□□□ -0.16
VARS-227ENST00000489979 NOP9Q86U38 636 aaKnown RBP14.05□□□□□ -0.16
VARS-227ENST00000489979 CCDC185Q8N715 623 aa14.05□□□□□ -0.16
VARS-227ENST00000489979 OR56A4Q8NGH8 313 aa14.05□□□□□ -0.16
VARS-227ENST00000489979 CCL4L1Q8NHW4 92 aa14.05□□□□□ -0.16
VARS-227ENST00000489979 HCAR2Q8TDS4 363 aa14.05□□□□□ -0.16
VARS-227ENST00000489979 FUBP1Q96AE4 644 aaKnown RBP14.05□□□□□ -0.16
VARS-227ENST00000489979 B3GNT4Q9C0J1 378 aa14.05□□□□□ -0.16
VARS-227ENST00000489979 EPN3Q9H201 632 aa14.05□□□□□ -0.16
VARS-227ENST00000489979 DPEP2Q9H4A9 486 aa14.05□□□□□ -0.16
VARS-227ENST00000489979 SUV39H2Q9H5I1 410 aa14.05□□□□□ -0.16
VARS-227ENST00000489979 FGF22Q9HCT0 170 aa14.05□□□□□ -0.16
VARS-227ENST00000489979 AKAP7Q9P0M2 348 aaPredicted RBP14.05□□□□□ -0.16
VARS-227ENST00000489979 LHX3Q9UBR4 397 aa14.05□□□□□ -0.16
VARS-227ENST00000489979 TSPAN11A1L157 253 aa14.04□□□□□ -0.16
VARS-227ENST00000489979 CACNB4O00305 520 aaPredicted RBP14.04□□□□□ -0.16
VARS-227ENST00000489979 B4GAT1O43505 415 aa14.04□□□□□ -0.16
VARS-227ENST00000489979 NUDT21O43809 227 aaKnown RBP14.04□□□□□ -0.16
VARS-227ENST00000489979 CPNE6O95741 557 aa14.04□□□□□ -0.16
VARS-227ENST00000489979 MMEP08473 750 aa14.04□□□□□ -0.16
VARS-227ENST00000489979 SDC4P31431 198 aa14.04□□□□□ -0.16
VARS-227ENST00000489979 MMP12P39900 470 aa14.04□□□□□ -0.16
VARS-227ENST00000489979 ATP1A2P50993 1020 aa14.04□□□□□ -0.16
VARS-227ENST00000489979 ARSDP51689 593 aa14.04□□□□□ -0.16
VARS-227ENST00000489979 OR1D5P58170 312 aa14.04□□□□□ -0.16
VARS-227ENST00000489979 KIAA1024LP59773 190 aa14.04□□□□□ -0.16
VARS-227ENST00000489979 KCNAB2Q13303 367 aa14.04□□□□□ -0.16
VARS-227ENST00000489979 CYTH1Q15438 398 aa14.04□□□□□ -0.16
VARS-227ENST00000489979 AMZ1Q400G9 498 aa14.04□□□□□ -0.16
VARS-227ENST00000489979 EFHC2Q5JST6 749 aa14.04□□□□□ -0.16
VARS-227ENST00000489979 PIM3Q86V86 326 aa14.04□□□□□ -0.16
VARS-227ENST00000489979 DNAAF5Q86Y56 855 aa14.04□□□□□ -0.16
VARS-227ENST00000489979 RCBTB1Q8NDN9 531 aa14.04□□□□□ -0.16
VARS-227ENST00000489979 GPT2Q8TD30 523 aa14.04□□□□□ -0.16
VARS-227ENST00000489979 NKD1Q969G9 470 aa14.04□□□□□ -0.16
VARS-227ENST00000489979 PMEPA1Q969W9 287 aa14.04□□□□□ -0.16
VARS-227ENST00000489979 ATP8A1Q9Y2Q0 1164 aa14.04□□□□□ -0.16
VARS-227ENST00000489979 FHOD1Q9Y613 1164 aa14.04□□□□□ -0.16
VARS-227ENST00000489979 C2CD4BA6NLJ0 364 aa14.03□□□□□ -0.16
VARS-227ENST00000489979 RASA4BC9J798 803 aa14.03□□□□□ -0.16
VARS-227ENST00000489979 RASA4O43374 803 aa14.03□□□□□ -0.16
VARS-227ENST00000489979 GP1BBP13224 206 aa14.03□□□□□ -0.16
VARS-227ENST00000489979 MAZP56270 477 aaKnown RBP14.03□□□□□ -0.16
VARS-227ENST00000489979 POLE2P56282 527 aa14.03□□□□□ -0.16
VARS-227ENST00000489979 HDAC4P56524 1084 aa14.03□□□□□ -0.16
VARS-227ENST00000489979 IGFBP7Q16270 282 aa14.03□□□□□ -0.16
VARS-227ENST00000489979 MAN2A1Q16706 1144 aa14.03□□□□□ -0.16
VARS-227ENST00000489979 CFAP58Q5T655 872 aa14.03□□□□□ -0.16
VARS-227ENST00000489979 STRADAQ7RTN6 431 aa14.03□□□□□ -0.16
VARS-227ENST00000489979 ZSWIM9Q86XI8 627 aa14.03□□□□□ -0.16
VARS-227ENST00000489979 PYROXD2Q8N2H3 581 aa14.03□□□□□ -0.16
VARS-227ENST00000489979 IL22RA1Q8N6P7 574 aa14.03□□□□□ -0.16
VARS-227ENST00000489979 RTL3Q8N8U3 475 aaKnown RBP14.03□□□□□ -0.16
VARS-227ENST00000489979 JOSD2Q8TAC2 188 aa14.03□□□□□ -0.16
VARS-227ENST00000489979 TAAR9Q96RI9 348 aa14.03□□□□□ -0.16
VARS-227ENST00000489979 NUDT22Q9BRQ3 303 aa14.03□□□□□ -0.16
VARS-227ENST00000489979 CYP4F12Q9HCS2 524 aa14.03□□□□□ -0.16
VARS-227ENST00000489979 MOSPD1Q9UJG1 213 aa14.03□□□□□ -0.16
VARS-227ENST00000489979 IGHV5-10-1A0A0J9YXX1 117 aa14.02□□□□□ -0.17
VARS-227ENST00000489979 TNFRSF10CO14798 259 aa14.02□□□□□ -0.17
VARS-227ENST00000489979 HGSO14964 777 aaPredicted RBP14.02□□□□□ -0.17
VARS-227ENST00000489979 BUB1BO60566 1050 aaPredicted RBP14.02□□□□□ -0.17
VARS-227ENST00000489979 RECQL5O94762 991 aaPredicted RBP14.02□□□□□ -0.17
VARS-227ENST00000489979 FGF3P11487 239 aaPredicted RBP14.02□□□□□ -0.17
VARS-227ENST00000489979 LIFP15018 202 aa14.02□□□□□ -0.17
VARS-227ENST00000489979 KELP23276 732 aa14.02□□□□□ -0.17
VARS-227ENST00000489979 EPHB2P29323 1055 aa14.02□□□□□ -0.17
VARS-227ENST00000489979 ALDH4A1P30038 563 aa14.02□□□□□ -0.17
VARS-227ENST00000489979 PTPN9P43378 593 aa14.02□□□□□ -0.17
VARS-227ENST00000489979 YBEYP58557 167 aaPredicted RBP14.02□□□□□ -0.17
VARS-227ENST00000489979 FOXK1P85037 733 aa14.02□□□□□ -0.17
VARS-227ENST00000489979 SERINC3Q13530 473 aa14.02□□□□□ -0.17
VARS-227ENST00000489979 GRM3Q14832 879 aa14.02□□□□□ -0.17
VARS-227ENST00000489979 KLHDC7AQ5VTJ3 777 aa14.02□□□□□ -0.17
VARS-227ENST00000489979 BRAT1Q6PJG6 821 aa14.02□□□□□ -0.17
VARS-227ENST00000489979 CAMK1DQ8IU85 385 aa14.02□□□□□ -0.17
VARS-227ENST00000489979 KIAA1524Q8TCG1 905 aa14.02□□□□□ -0.17
VARS-227ENST00000489979 FAM172AQ8WUF8 416 aa14.02□□□□□ -0.17
VARS-227ENST00000489979 CENPIQ92674 756 aaPredicted RBP14.02□□□□□ -0.17
VARS-227ENST00000489979 NTAN1Q96AB6 310 aa14.02□□□□□ -0.17
VARS-227ENST00000489979 CCDC74BQ96LY2 380 aa14.02□□□□□ -0.17
VARS-227ENST00000489979 ZNF641Q96N77 438 aaPredicted RBP14.02□□□□□ -0.17
VARS-227ENST00000489979 LGR4Q9BXB1 951 aa14.02□□□□□ -0.17
VARS-227ENST00000489979 SPATS2LQ9NUQ6 558 aaKnown RBP14.02□□□□□ -0.17
VARS-227ENST00000489979 UBA2Q9UBT2 640 aaPredicted RBP14.02□□□□□ -0.17
VARS-227ENST00000489979 PCDHGA3Q9Y5H0 932 aa14.02□□□□□ -0.17
VARS-227ENST00000489979 CFAP69A5D8W1 941 aa14.01□□□□□ -0.17
VARS-227ENST00000489979 RHPN2P1A8MT19 583 aa14.01□□□□□ -0.17
VARS-227ENST00000489979 HOXC4P09017 264 aaPredicted RBP14.01□□□□□ -0.17
VARS-227ENST00000489979 CR2P20023 1033 aa14.01□□□□□ -0.17
VARS-227ENST00000489979 UGT1A3P35503 534 aa14.01□□□□□ -0.17
VARS-227ENST00000489979 CCR10P46092 362 aa14.01□□□□□ -0.17
VARS-227ENST00000489979 RALGDSQ12967 914 aa14.01□□□□□ -0.17
VARS-227ENST00000489979 PARP15Q460N3 678 aa14.01□□□□□ -0.17
VARS-227ENST00000489979 VWA3BQ502W6 1294 aa14.01□□□□□ -0.17
VARS-227ENST00000489979 ZNF438Q7Z4V0 828 aa14.01□□□□□ -0.17
VARS-227ENST00000489979 C17orf82Q86X59 251 aaPredicted RBP14.01□□□□□ -0.17
VARS-227ENST00000489979 PELI3Q8N2H9 469 aa14.01□□□□□ -0.17
VARS-227ENST00000489979 GPBAR1Q8TDU6 330 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms