RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 CLHC1Q8NHS4 586 aa17.68■□□□□ 0.42
NPHP4-209ENST00000489180 PHF10Q8WUB8 498 aaKnown RBP17.68■□□□□ 0.42
NPHP4-209ENST00000489180 OR52E6Q96RD3 313 aa17.68■□□□□ 0.42
NPHP4-209ENST00000489180 TRMT13Q9NUP7 481 aaKnown RBP17.68■□□□□ 0.42
NPHP4-209ENST00000489180 SALL4Q9UJQ4 1053 aa17.68■□□□□ 0.42
NPHP4-209ENST00000489180 NOL4O94818 638 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 PRKG2Q13237 762 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 PPM1LQ5SGD2 360 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 RBM15BQ8NDT2 890 aaKnown RBP17.67■□□□□ 0.42
NPHP4-209ENST00000489180 NDRG1Q92597 394 aaKnown RBP17.67■□□□□ 0.42
NPHP4-209ENST00000489180 PRPF19Q9UMS4 504 aaKnown RBP17.67■□□□□ 0.42
NPHP4-209ENST00000489180 TBC1D30Q9Y2I9 924 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 NPEPPSL1A6NEC2 478 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 PPM1JQ5JR12 505 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 RIOX2Q8IUF8 465 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 CLYBLQ8N0X4 340 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 PQLC1Q8N2U9 271 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 OR4L1Q8NH43 312 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 GORASP1Q9BQQ3 440 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 PTGFRNQ9P2B2 879 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 TRAF6Q9Y4K3 522 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 WARSP23381 471 aaKnown RBP17.67■□□□□ 0.42
NPHP4-209ENST00000489180 DDR1Q08345 913 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 PPIL2Q13356 520 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 PTPN20Q4JDL3 420 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 C6orf52Q5T4I8 152 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 IQSEC1Q6DN90 963 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 CXCL17Q6UXB2 119 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 AADATQ8N5Z0 425 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 KIFC1Q9BW19 673 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 A0A0J9YYE9 177 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 SGTAO43765 313 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 OTCP00480 354 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 SLC26A3P40879 764 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 TRIM32Q13049 653 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 CERKQ8TCT0 537 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 GIPC3Q8TF64 312 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 TNFRSF25Q93038 417 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 C2orf49Q9BVC5 232 aaPredicted RBP17.67■□□□□ 0.42
NPHP4-209ENST00000489180 ANGPT4Q9Y264 503 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 G3V2T6 193 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 MARSP56192 900 aaKnown RBP17.67■□□□□ 0.42
NPHP4-209ENST00000489180 NDUFAF6Q330K2 333 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 FAM151BQ6UXP7 276 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 CAMKK1Q8N5S9 505 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 FITM2Q8N6M3 262 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 SLC44A1Q8WWI5 657 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 MAP10Q9P2G4 905 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 TMCO1Q9UM00 188 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 VWA7Q9Y334 891 aa17.67■□□□□ 0.42
NPHP4-209ENST00000489180 OR10H3O60404 316 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 SLC22A3O75751 556 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 IDO1P14902 403 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 MED22Q15528 200 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 HECTD3Q5T447 861 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 OTOP3Q7RTS5 596 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 ZNF483Q8TF39 744 aaPredicted RBP17.66■□□□□ 0.42
NPHP4-209ENST00000489180 CIB1Q99828 191 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 ZNF222Q9UK12 451 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 VPS4AQ9UN37 437 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 MC4RP32245 332 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 KLF10Q13118 480 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 GALNT5Q7Z7M9 940 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 GPR180Q86V85 440 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 SPACA7Q96KW9 195 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 ERGIC3Q9Y282 383 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 NRCAMQ92823 1304 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 DEF8Q6ZN54 512 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 HELQQ8TDG4 1101 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 CPXM1Q96SM3 734 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 DMTF1Q9Y222 760 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 RFXANKO14593 260 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 TMCC2O75069 709 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 STX11O75558 287 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 MTAPQ13126 283 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 GNA13Q14344 377 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 NOMO1Q15155 1222 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 PROSER1Q86XN7 944 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 QKIQ96PU8 341 aaKnown RBP eCLIP17.66■□□□□ 0.426e-11■■■■□ 19.4
NPHP4-209ENST00000489180 CMTM6Q9NX76 183 aa17.66■□□□□ 0.42
NPHP4-209ENST00000489180 ADGRB2O60241 1585 aa17.65■□□□□ 0.42
NPHP4-209ENST00000489180 MAGP20916 626 aa17.65■□□□□ 0.42
NPHP4-209ENST00000489180 CRHR1P34998 444 aa17.65■□□□□ 0.42
NPHP4-209ENST00000489180 WNT3AP56704 352 aa17.65■□□□□ 0.42
NPHP4-209ENST00000489180 MRPL9Q9BYD2 267 aaKnown RBP17.65■□□□□ 0.42
NPHP4-209ENST00000489180 CDH22Q9UJ99 828 aa17.65■□□□□ 0.42
NPHP4-209ENST00000489180 FADS2O95864 444 aaKnown RBP17.65■□□□□ 0.42
NPHP4-209ENST00000489180 NR2F1P10589 423 aa17.65■□□□□ 0.42
NPHP4-209ENST00000489180 PRG2P13727 222 aa17.65■□□□□ 0.42
NPHP4-209ENST00000489180 IL12AP29459 219 aa17.65■□□□□ 0.42
NPHP4-209ENST00000489180 ADSLP30566 484 aaPredicted RBP17.65■□□□□ 0.42
NPHP4-209ENST00000489180 SNRPD1P62314 119 aaKnown RBP17.65■□□□□ 0.42
NPHP4-209ENST00000489180 NDUFA5Q16718 116 aa17.65■□□□□ 0.42
NPHP4-209ENST00000489180 RAET1GQ6H3X3 334 aa17.65■□□□□ 0.42
NPHP4-209ENST00000489180 XYLT1Q86Y38 959 aa17.65■□□□□ 0.42
NPHP4-209ENST00000489180 KBTBD8Q8NFY9 601 aa17.65■□□□□ 0.42
NPHP4-209ENST00000489180 OR52L1Q8NGH7 329 aa17.65■□□□□ 0.42
NPHP4-209ENST00000489180 MAGEC3Q8TD91 643 aa17.65■□□□□ 0.42
NPHP4-209ENST00000489180 OR6K2Q8NGY2 324 aa17.65■□□□□ 0.42
NPHP4-209ENST00000489180 MOSPD2Q8NHP6 518 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms