RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 TRPC7Q9HCX4 862 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 TLR8Q9NR97 1041 aaKnown RBP8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.35□□□□□ -1.074e-7■■■■□ 24.4
TRAPPC12-221ENST00000489032 ZNF180Q9UJW8 692 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 AJAP1Q9UKB5 411 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 MYO6Q9UM54 1294 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 SCML2Q9UQR0 700 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.35□□□□□ -1.073e-6■□□□□ 10.3
TRAPPC12-221ENST00000489032 CNOT1A5YKK6 2376 aaKnown RBP8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 GCN1Q92616 2671 aaKnown RBP8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 PTPRDP23468 1912 aa8.35□□□□□ -1.07
TRAPPC12-221ENST00000489032 DOCK8Q8NF50 2099 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 NCANO14594 1321 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 A0A0A6YYK5 440 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 SRRM3A6NNA2 597 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 AP5Z1O43299 807 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 SEC24DO94855 1032 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 IL33O95760 270 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 PNMA6AP0CW24 399 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 RALAP11233 206 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 CYP11B1P15538 503 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 BMP7P18075 431 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 CCR2P41597 374 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 TKTL1P51854 596 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 LIMK1P53667 647 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 GSDMDP57764 484 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 CD69Q07108 199 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 HTR4Q13639 388 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 TRIM14Q14142 442 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 MLF2Q15773 248 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 HECTD3Q5T447 861 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 SFMBT2Q5VUG0 894 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 DPY19L2P1Q6NXN4 242 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 TADA2BQ86TJ2 420 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 MON1AQ86VX9 555 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 YAF2Q8IY57 180 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 MIER2Q8N344 545 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 MAB21L3Q8N8X9 362 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 PLA2G15Q8NCC3 412 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 TMEM35BQ8NCS4 154 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 SCAMP5Q8TAC9 235 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 SLC35F5Q8WV83 523 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 SMARCD2Q92925 531 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 TEKT5Q96M29 485 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 CDK5RAP1Q96SZ6 601 aaKnown RBP8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 SOX7Q9BT81 388 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 TRIM62Q9BVG3 475 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 MIS12Q9H081 205 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 LHX5Q9H2C1 402 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 SYNCQ9H7C4 482 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 LTB4R2Q9NPC1 389 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 PRMT8Q9NR22 394 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 TMEM30AQ9NV96 361 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 IL37Q9NZH6 218 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 CHORDC1Q9UHD1 332 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 MTF2Q9Y483 593 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 NBEAQ8NFP9 2946 aa8.34□□□□□ -1.07
TRAPPC12-221ENST00000489032 ITIH6Q6UXX5 1313 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 ZNF840PA6NDX5 716 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 HHLA1C9JL84 531 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 ANHXE9PGG2 379 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 TAF4O00268 1085 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 EPHB6O15197 1021 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 AKAP10O43572 662 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 PCDHGA12O60330 932 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 NOBOXO60393 691 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 MOSPD3O75425 235 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 ECI2O75521 394 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 LSM8O95777 96 aaKnown RBP8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 ZBED1O96006 694 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 CALCAP01258 141 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 HDCP19113 662 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 RGS7P49802 495 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 GPC5P78333 572 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 GOLGA8FQ08AF8 430 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 GOLGA8DPQ0D2H9 430 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 ADIGQ0VDE8 80 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 ASIC2Q16515 512 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 AASDHQ4L235 1098 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 SLC44A4Q53GD3 710 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 TAF3Q5VWG9 929 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 SPECC1LQ69YQ0 1117 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 TXNDC8Q6A555 127 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 DENND1BQ6P3S1 775 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 TRIM72Q6ZMU5 477 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 ARHGEF18Q6ZSZ5 1173 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 GPRIN1Q7Z2K8 1008 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 CCDC186Q7Z3E2 898 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 UNC5BQ8IZJ1 945 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 CMTM8Q8IZV2 173 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 SPC24Q8NBT2 197 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 IPO4Q8TEX9 1081 aaKnown RBP8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 TSPEARQ8WU66 669 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 ELSPBP1Q96BH3 223 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 SLC7A6OSQ96CW6 309 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 NELL2Q99435 816 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 ZSWIM1Q9BR11 485 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 ULBP1Q9BZM6 244 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 CEP295Q9C0D2 2601 aa8.33□□□□□ -1.08
TRAPPC12-221ENST00000489032 KIF9Q9HAQ2 790 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms