RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 SLC34A2O95436 690 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 TRBC1P01850 177 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 CYP2A6P11509 494 aaPredicted RBP12.37□□□□□ -0.43
TRAIP-209ENST00000488860 MGAT1P26572 445 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 VIPR1P32241 457 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 TPMTP51580 245 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 DMWDQ09019 674 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 CCDC15Q0P6D6 951 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 ELP6Q0PNE2 266 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 SFSWAPQ12872 951 aaKnown RBP12.37□□□□□ -0.43
TRAIP-209ENST00000488860 ERCC6LQ2NKX8 1250 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 LRRC8BQ6P9F7 803 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 ZDHHC24Q6UX98 284 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 RANBP10Q6VN20 620 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 GLT6D1Q7Z4J2 308 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 BMP8AQ7Z5Y6 402 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 KBTBD6Q86V97 674 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 RASSF3Q86WH2 238 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 CCDC25Q86WR0 208 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 GSPT2Q8IYD1 628 aaKnown RBP12.37□□□□□ -0.43
TRAIP-209ENST00000488860 CAMKK1Q8N5S9 505 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 MCUQ8NE86 351 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 OR14C36Q8NHC7 312 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 FBXO25Q8TCJ0 367 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 HCAR2Q8TDS4 363 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 WRAP53Q9BUR4 548 aaKnown RBP12.37□□□□□ -0.43
TRAIP-209ENST00000488860 NEUROG2Q9H2A3 272 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 ANKZF1Q9H8Y5 726 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 PRMT8Q9NR22 394 aaPredicted RBP12.37□□□□□ -0.43
TRAIP-209ENST00000488860 USP36Q9P275 1121 aaKnown RBP12.37□□□□□ -0.43
TRAIP-209ENST00000488860 B4GALT6Q9UBX8 382 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 ZNF711Q9Y462 761 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 SPO11Q9Y5K1 396 aa12.37□□□□□ -0.43
TRAIP-209ENST00000488860 TP53BP1Q12888 1972 aaPredicted RBP12.36□□□□□ -0.43
TRAIP-209ENST00000488860 THADAQ6YHU6 1953 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 C1orf232A0A0U1RR37 186 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 CCDC78A2IDD5 438 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 SMAPO00193 183 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 AXIN1O15169 862 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 AVILO75366 819 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 BANF1O75531 89 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 PCDH8O95206 1070 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 PAPSS2O95340 614 aaPredicted RBP12.36□□□□□ -0.43
TRAIP-209ENST00000488860 EPOP01588 193 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 HNF1BP35680 557 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 MMP12P39900 470 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 CARSP49589 748 aaKnown RBP12.36□□□□□ -0.43
TRAIP-209ENST00000488860 ADPRHP54922 357 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 DRG2P55039 364 aaKnown RBP12.36□□□□□ -0.43
TRAIP-209ENST00000488860 ARL4CP56559 192 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 TUBB4BP68371 445 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 CRADDP78560 199 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 CAV1Q03135 178 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 CSTF1Q05048 431 aaKnown RBP12.36□□□□□ -0.43
TRAIP-209ENST00000488860 ARHGEF7Q14155 803 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 HIF1AQ16665 826 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 BBS9Q3SYG4 887 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 CERCAMQ5T4B2 595 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 DENND5AQ6IQ26 1287 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 CASC4Q6P4E1 433 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 USP30Q70CQ3 517 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 DPPA4Q7L190 304 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 LYSMD3Q7Z3D4 306 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 TSPAN33Q86UF1 283 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 CAND1Q86VP6 1230 aaKnown RBP12.36□□□□□ -0.43
TRAIP-209ENST00000488860 C1orf210Q8IVY1 113 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 PPHLN1Q8NEY8 458 aaKnown RBP12.36□□□□□ -0.43
TRAIP-209ENST00000488860 CXorf40AQ8TE69 158 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 RLN3Q8WXF3 142 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 SEC14L1Q92503 715 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 ART4Q93070 314 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 RAB7BQ96AH8 199 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 GPR63Q9BZJ6 419 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 XAB2Q9HCS7 855 aaKnown RBP12.36□□□□□ -0.43
TRAIP-209ENST00000488860 GDF3Q9NR23 364 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 SYBUQ9NX95 663 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 MTRF1LQ9UGC7 380 aaKnown RBP12.36□□□□□ -0.43
TRAIP-209ENST00000488860 EBF1Q9UH73 591 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 FZD4Q9ULV1 537 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 INVSQ9Y283 1065 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 FADS3Q9Y5Q0 445 aa12.36□□□□□ -0.43
TRAIP-209ENST00000488860 GOLGA8CPA6NN73 597 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 BHMG1C9JSJ3 638 aaPredicted RBP12.35□□□□□ -0.43
TRAIP-209ENST00000488860 AP3B1O00203 1094 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 SLC7A4O43246 635 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 SPINT1O43278 529 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 PLRG1O43660 514 aaKnown RBP12.35□□□□□ -0.43
TRAIP-209ENST00000488860 BUD23O43709 281 aaKnown RBP12.35□□□□□ -0.43
TRAIP-209ENST00000488860 ZNF217O75362 1048 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 ELFN1P0C7U0 828 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 MLNP12872 115 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 LHCGRP22888 699 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 AVPR2P30518 371 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 FNTBP49356 437 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 TAS2R38P59533 333 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 DHX9Q08211 1270 aaKnown RBP12.35□□□□□ -0.43
TRAIP-209ENST00000488860 RALGDSQ12967 914 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 CUL1Q13616 776 aa12.35□□□□□ -0.43
TRAIP-209ENST00000488860 NAA30Q147X3 362 aaPredicted RBP12.35□□□□□ -0.43
TRAIP-209ENST00000488860 ELF2Q15723 593 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms