RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 RIPK3Q9Y572 518 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 GOLGA8CPA6NN73 597 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 GPR25O00155 361 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 SEC14L2O76054 403 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 KRT19P08727 400 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 PDGFRAP16234 1089 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 ALOX12P18054 663 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 BAG6P46379 1132 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 PDK2Q15119 407 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 PXDC1Q5TGL8 231 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 PMF1Q6P1K2 205 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 FKBP9P1Q75LS8 142 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 NT5DC4Q86YG4 428 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 SPARTQ8N0X7 666 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 ZNF669Q96BR6 464 aaPredicted RBP16.26■□□□□ 0.19
MCF2L-229ENST00000488765 DEFB129Q9H1M3 183 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 SUCOQ9UBS9 1254 aaKnown RBP16.26■□□□□ 0.19
MCF2L-229ENST00000488765 KPNA7A9QM74 516 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 NR5A2O00482 541 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 CASP3P42574 277 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 MAP2K4P45985 399 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 CCNYL2Q5T2Q4 361 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 CLEC6AQ6EIG7 209 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 GTF2IRD2BQ6EKJ0 949 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 ZNF773Q6PK81 442 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 SLC16A12Q6ZSM3 486 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 GTF2IRD2Q86UP8 949 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 MAP4K3Q8IVH8 894 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 PCDH19Q8TAB3 1148 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 ATG4CQ96DT6 458 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 RNF145Q96MT1 663 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 TBC1D13Q9NVG8 400 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 PTGDR2Q9Y5Y4 395 aa16.26■□□□□ 0.19
MCF2L-229ENST00000488765 PRPSAP2O60256 369 aa16.25■□□□□ 0.19
MCF2L-229ENST00000488765 NDUFS2O75306 463 aa16.25■□□□□ 0.19
MCF2L-229ENST00000488765 PSMA4P25789 261 aaKnown RBP16.25■□□□□ 0.19
MCF2L-229ENST00000488765 GMPSP49915 693 aaPredicted RBP16.25■□□□□ 0.19
MCF2L-229ENST00000488765 P2RX3P56373 397 aa16.25■□□□□ 0.19
MCF2L-229ENST00000488765 MADCAM1Q13477 382 aa16.25■□□□□ 0.19
MCF2L-229ENST00000488765 DALRD3Q5D0E6 543 aaKnown RBP16.25■□□□□ 0.19
MCF2L-229ENST00000488765 ABI1Q8IZP0 508 aa16.25■□□□□ 0.19
MCF2L-229ENST00000488765 MFSD3Q96ES6 412 aa16.25■□□□□ 0.19
MCF2L-229ENST00000488765 RNF157Q96PX1 679 aa16.25■□□□□ 0.19
MCF2L-229ENST00000488765 RMDN3Q96TC7 470 aa16.25■□□□□ 0.19
MCF2L-229ENST00000488765 TARS2Q9BW92 718 aaKnown RBP16.25■□□□□ 0.19
MCF2L-229ENST00000488765 ZNF717Q9BY31 904 aaPredicted RBP16.25■□□□□ 0.19
MCF2L-229ENST00000488765 WDR12Q9GZL7 423 aaKnown RBP16.25■□□□□ 0.19
MCF2L-229ENST00000488765 HAPLN2Q9GZV7 340 aa16.25■□□□□ 0.19
MCF2L-229ENST00000488765 KCND2Q9NZV8 630 aa16.25■□□□□ 0.19
MCF2L-229ENST00000488765 VPS28Q9UK41 221 aa16.25■□□□□ 0.19
MCF2L-229ENST00000488765 CDK5RAP2Q96SN8 1893 aa16.25■□□□□ 0.19
MCF2L-229ENST00000488765 ACOX3O15254 700 aa16.25■□□□□ 0.19
MCF2L-229ENST00000488765 SRP72O76094 671 aaKnown RBP16.25■□□□□ 0.19
MCF2L-229ENST00000488765 AXLP30530 894 aa16.25■□□□□ 0.19
MCF2L-229ENST00000488765 BCAT1P54687 386 aa16.25■□□□□ 0.19
MCF2L-229ENST00000488765 IL1RL1Q01638 556 aa16.25■□□□□ 0.19
MCF2L-229ENST00000488765 STEAP3Q658P3 488 aa16.25■□□□□ 0.19
MCF2L-229ENST00000488765 TIFABQ6ZNK6 161 aa16.25■□□□□ 0.19
MCF2L-229ENST00000488765 STK32CQ86UX6 486 aa16.25■□□□□ 0.19
MCF2L-229ENST00000488765 TTC16Q8NEE8 873 aa16.25■□□□□ 0.19
MCF2L-229ENST00000488765 URGCPQ8TCY9 931 aa16.25■□□□□ 0.19
MCF2L-229ENST00000488765 SLC7A3Q8WY07 619 aa16.25■□□□□ 0.19
MCF2L-229ENST00000488765 ADPGKQ9BRR6 497 aa16.25■□□□□ 0.19
MCF2L-229ENST00000488765 RPAP3Q9H6T3 665 aaPredicted RBP16.25■□□□□ 0.19
MCF2L-229ENST00000488765 CNTNAP1P78357 1384 aa16.25■□□□□ 0.19
MCF2L-229ENST00000488765 ANKRD31Q8N7Z5 1873 aa16.25■□□□□ 0.19
MCF2L-229ENST00000488765 TRIM24O15164 1050 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 KMOO15229 486 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 SLC4A1P02730 911 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 HADHAP40939 763 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 TNFSF9P41273 254 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 DPY19L1Q2PZI1 675 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 KIF19Q2TAC6 998 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 TMEM143Q96AN5 459 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 TNKS2Q9H2K2 1166 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 LRRC40Q9H9A6 602 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 H0YJX3 145 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 H3BUI4 141 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 DYRK3O43781 588 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 KPNA6O60684 536 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 C1QTNF8P60827 252 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 GALK2Q01415 458 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 ARHGEF16Q5VV41 709 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 TXNDC11Q6PKC3 985 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 LSMEM2Q8N112 164 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 MFSD4AQ8N468 514 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 CCNYQ8ND76 341 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 TP53INP1Q96A56 240 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 PHF21BQ96EK2 531 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 ZNF560Q96MR9 790 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 SMURF2Q9HAU4 748 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 C12orf4Q9NQ89 552 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 OXSMQ9NWU1 459 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 HACL1Q9UJ83 578 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 PCDHB3Q9Y5E6 796 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 NME4O00746 187 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 APOL1O14791 398 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 TFECO14948 347 aaPredicted RBP16.24■□□□□ 0.19
MCF2L-229ENST00000488765 UBDO15205 165 aa16.24■□□□□ 0.19
MCF2L-229ENST00000488765 CD40LGP29965 261 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms