RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 TRABD2AQ86V40 505 aa19.51■□□□□ 0.71
CCM2-216ENST00000488727 BBS5Q8N3I7 341 aa19.51■□□□□ 0.71
CCM2-216ENST00000488727 CABS1Q96KC9 395 aa19.51■□□□□ 0.71
CCM2-216ENST00000488727 HEPHQ9BQS7 1158 aa19.51■□□□□ 0.71
CCM2-216ENST00000488727 ZDHHC6Q9H6R6 413 aa19.51■□□□□ 0.71
CCM2-216ENST00000488727 SENP1Q9P0U3 644 aa19.51■□□□□ 0.71
CCM2-216ENST00000488727 IL36AQ9UHA7 158 aa19.51■□□□□ 0.71
CCM2-216ENST00000488727 LEFTY1O75610 366 aa19.51■□□□□ 0.71
CCM2-216ENST00000488727 ALDH1A2O94788 518 aa19.51■□□□□ 0.71
CCM2-216ENST00000488727 SCNN1BP51168 640 aa19.51■□□□□ 0.71
CCM2-216ENST00000488727 SLC18A1P54219 525 aa19.51■□□□□ 0.71
CCM2-216ENST00000488727 ITIH4Q14624 930 aa19.51■□□□□ 0.71
CCM2-216ENST00000488727 TEX44Q53QW1 395 aa19.51■□□□□ 0.71
CCM2-216ENST00000488727 ZNF776Q68DI1 518 aaPredicted RBP19.51■□□□□ 0.71
CCM2-216ENST00000488727 ALG1LQ6GMV1 187 aa19.51■□□□□ 0.71
CCM2-216ENST00000488727 PPP1R21Q6ZMI0 780 aa19.51■□□□□ 0.71
CCM2-216ENST00000488727 FAM71DQ8N9W8 422 aa19.51■□□□□ 0.71
CCM2-216ENST00000488727 CKAP2Q8WWK9 683 aa19.51■□□□□ 0.71
CCM2-216ENST00000488727 TPSD1Q9BZJ3 242 aa19.51■□□□□ 0.71
CCM2-216ENST00000488727 VPS37BQ9H9H4 285 aa19.51■□□□□ 0.71
CCM2-216ENST00000488727 CD93Q9NPY3 652 aa19.51■□□□□ 0.71
CCM2-216ENST00000488727 EBF1Q9UH73 591 aa19.51■□□□□ 0.71
CCM2-216ENST00000488727 TTLL3Q9Y4R7 772 aa19.51■□□□□ 0.71
CCM2-216ENST00000488727 KCNN4O15554 427 aa19.5■□□□□ 0.71
CCM2-216ENST00000488727 MTSS1O43312 755 aa19.5■□□□□ 0.71
CCM2-216ENST00000488727 GALR2O43603 387 aaPredicted RBP19.5■□□□□ 0.71
CCM2-216ENST00000488727 TMEM63AO94886 807 aa19.5■□□□□ 0.71
CCM2-216ENST00000488727 FSBPO95073 299 aa19.5■□□□□ 0.71
CCM2-216ENST00000488727 POP4O95707 220 aaKnown RBP19.5■□□□□ 0.71
CCM2-216ENST00000488727 IL1BP01584 269 aa19.5■□□□□ 0.71
CCM2-216ENST00000488727 HOXA6P31267 233 aa19.5■□□□□ 0.71
CCM2-216ENST00000488727 PSMD8P48556 350 aa19.5■□□□□ 0.71
CCM2-216ENST00000488727 CSNK1DP48730 415 aa19.5■□□□□ 0.71
CCM2-216ENST00000488727 GPX6P59796 221 aa19.5■□□□□ 0.71
CCM2-216ENST00000488727 IFT88Q13099 833 aa19.5■□□□□ 0.71
CCM2-216ENST00000488727 IHHQ14623 411 aa19.5■□□□□ 0.71
CCM2-216ENST00000488727 TMED2Q15363 201 aa19.5■□□□□ 0.71
CCM2-216ENST00000488727 ANGPT1Q15389 498 aa19.5■□□□□ 0.71
CCM2-216ENST00000488727 CST6Q15828 149 aa19.5■□□□□ 0.71
CCM2-216ENST00000488727 ARSIQ5FYB1 569 aa19.5■□□□□ 0.71
CCM2-216ENST00000488727 KIAA1324Q6UXG2 1013 aaKnown RBP19.5■□□□□ 0.71
CCM2-216ENST00000488727 ARHGEF18Q6ZSZ5 1173 aa19.5■□□□□ 0.71
CCM2-216ENST00000488727 ZNF567Q8N184 647 aa19.5■□□□□ 0.71
CCM2-216ENST00000488727 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.5■□□□□ 0.71
CCM2-216ENST00000488727 CCDC197Q8NCU1 140 aa19.5■□□□□ 0.71
CCM2-216ENST00000488727 PIP4K2CQ8TBX8 421 aa19.5■□□□□ 0.71
CCM2-216ENST00000488727 SIPA1Q96FS4 1042 aa19.5■□□□□ 0.71
CCM2-216ENST00000488727 AGAP3Q96P47 875 aa19.5■□□□□ 0.71
CCM2-216ENST00000488727 NUDCD1Q96RS6 583 aa19.5■□□□□ 0.71
CCM2-216ENST00000488727 POLR1EQ9GZS1 481 aaKnown RBP19.5■□□□□ 0.71
CCM2-216ENST00000488727 PAK5Q9P286 719 aa19.5■□□□□ 0.71
CCM2-216ENST00000488727 FBXO4Q9UKT5 387 aa19.5■□□□□ 0.71
CCM2-216ENST00000488727 RNASEH1O60930 286 aaKnown RBP19.49■□□□□ 0.71
CCM2-216ENST00000488727 NEBLO76041 1014 aa19.49■□□□□ 0.71
CCM2-216ENST00000488727 PIGNO95427 931 aa19.49■□□□□ 0.71
CCM2-216ENST00000488727 DSC2Q02487 901 aa19.49■□□□□ 0.71
CCM2-216ENST00000488727 KCNJ11Q14654 390 aa19.49■□□□□ 0.71
CCM2-216ENST00000488727 POM121L1PQ3SYA9 428 aa19.49■□□□□ 0.71
CCM2-216ENST00000488727 FNBP1LQ5T0N5 605 aa19.49■□□□□ 0.71
CCM2-216ENST00000488727 DSG4Q86SJ6 1040 aa19.49■□□□□ 0.71
CCM2-216ENST00000488727 SRRM1Q8IYB3 904 aaKnown RBP19.49■□□□□ 0.71
CCM2-216ENST00000488727 PGBD3Q8N328 593 aa19.49■□□□□ 0.71
CCM2-216ENST00000488727 TMIEQ8NEW7 156 aa19.49■□□□□ 0.71
CCM2-216ENST00000488727 ARRDC2Q8TBH0 407 aa19.49■□□□□ 0.71
CCM2-216ENST00000488727 PYROXD1Q8WU10 500 aa19.49■□□□□ 0.71
CCM2-216ENST00000488727 DYDC1Q8WWB3 177 aa19.49■□□□□ 0.71
CCM2-216ENST00000488727 SGSM3Q96HU1 749 aa19.49■□□□□ 0.71
CCM2-216ENST00000488727 TEKT5Q96M29 485 aa19.49■□□□□ 0.71
CCM2-216ENST00000488727 SEMA3CQ99985 751 aa19.49■□□□□ 0.71
CCM2-216ENST00000488727 FRMD8Q9BZ67 464 aaPredicted RBP19.49■□□□□ 0.71
CCM2-216ENST00000488727 NOD2Q9HC29 1040 aa19.49■□□□□ 0.71
CCM2-216ENST00000488727 KCNK9Q9NPC2 374 aa19.49■□□□□ 0.71
CCM2-216ENST00000488727 NKIRAS1Q9NYS0 192 aa19.49■□□□□ 0.71
CCM2-216ENST00000488727 PSMC3IPQ9P2W1 217 aaPredicted RBP19.49■□□□□ 0.71
CCM2-216ENST00000488727 TBK1Q9UHD2 729 aa19.49■□□□□ 0.71
CCM2-216ENST00000488727 MID1O15344 667 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 PRPF4O43172 522 aaKnown RBP eCLIP19.48■□□□□ 0.711e-6■■□□□ 13.8
CCM2-216ENST00000488727 PRNPP04156 253 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 SLC8A1P32418 973 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 CD68P34810 354 aaPredicted RBP19.48■□□□□ 0.71
CCM2-216ENST00000488727 NUBP1P53384 320 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 ITKQ08881 620 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 NIPAL4Q0D2K0 466 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 MPP2Q14168 576 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 MSS51Q4VC12 460 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 NCEH1Q6PIU2 408 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 CCDC121Q6ZUS5 278 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 PDIK1LQ8N165 341 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 VAT1Q99536 393 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 WDR83Q9BRX9 315 aaKnown RBP19.48■□□□□ 0.71
CCM2-216ENST00000488727 DHRS4Q9BTZ2 278 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 CPEB1Q9BZB8 566 aaKnown RBP19.48■□□□□ 0.71
CCM2-216ENST00000488727 ACTR5Q9H9F9 607 aaPredicted RBP19.48■□□□□ 0.71
CCM2-216ENST00000488727 SAMD15Q9P1V8 674 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 TCRBV7S3A2A0A539 114 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 GOLGA8MH3BSY2 632 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 ZBTB24O43167 697 aaPredicted RBP19.48■□□□□ 0.71
CCM2-216ENST00000488727 UGT2B4P06133 528 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 MAGEA6P43360 314 aa19.48■□□□□ 0.71
CCM2-216ENST00000488727 FNTBP49356 437 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms