RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 PRAMEF10O60809 474 aa19.17■□□□□ 0.66
GGPS1-206ENST00000488594 UNGP13051 313 aaPredicted RBP19.17■□□□□ 0.66
GGPS1-206ENST00000488594 SOX5P35711 763 aa19.17■□□□□ 0.66
GGPS1-206ENST00000488594 PTP4A2Q12974 167 aa19.17■□□□□ 0.66
GGPS1-206ENST00000488594 ARHGEF7Q14155 803 aa19.17■□□□□ 0.66
GGPS1-206ENST00000488594 DPCR1Q3MIW9 517 aa19.17■□□□□ 0.66
GGPS1-206ENST00000488594 C14orf28Q4W4Y0 310 aa19.17■□□□□ 0.66
GGPS1-206ENST00000488594 TCP11X2Q5H9J9 407 aa19.17■□□□□ 0.66
GGPS1-206ENST00000488594 PYROXD2Q8N2H3 581 aa19.17■□□□□ 0.66
GGPS1-206ENST00000488594 C3orf20Q8ND61 904 aa19.17■□□□□ 0.66
GGPS1-206ENST00000488594 GANQ9H2C0 597 aa19.17■□□□□ 0.66
GGPS1-206ENST00000488594 ADAM22Q9P0K1 906 aa19.17■□□□□ 0.66
GGPS1-206ENST00000488594 AKAP7Q9P0M2 348 aaPredicted RBP19.17■□□□□ 0.66
GGPS1-206ENST00000488594 LRIT1Q9P2V4 623 aa19.17■□□□□ 0.66
GGPS1-206ENST00000488594 PCDHGA4Q9Y5G9 962 aa19.17■□□□□ 0.66
GGPS1-206ENST00000488594 ANKRD62A6NC57 917 aa19.16■□□□□ 0.66
GGPS1-206ENST00000488594 CREB3O43889 395 aa19.16■□□□□ 0.66
GGPS1-206ENST00000488594 CALB1P05937 261 aa19.16■□□□□ 0.66
GGPS1-206ENST00000488594 HOXC4P09017 264 aaPredicted RBP19.16■□□□□ 0.66
GGPS1-206ENST00000488594 ITIH1P19827 911 aa19.16■□□□□ 0.66
GGPS1-206ENST00000488594 HTR7P34969 479 aa19.16■□□□□ 0.66
GGPS1-206ENST00000488594 SRSF6Q13247 344 aaKnown RBP19.16■□□□□ 0.66
GGPS1-206ENST00000488594 HLTFQ14527 1009 aaKnown RBP eCLIP19.16■□□□□ 0.66
GGPS1-206ENST00000488594 TMEM164Q5U3C3 297 aa19.16■□□□□ 0.66
GGPS1-206ENST00000488594 SCYL2Q6P3W7 929 aa19.16■□□□□ 0.66
GGPS1-206ENST00000488594 WDR59Q6PJI9 974 aa19.16■□□□□ 0.66
GGPS1-206ENST00000488594 PHF13Q86YI8 300 aaPredicted RBP19.16■□□□□ 0.66
GGPS1-206ENST00000488594 OR1E3Q8WZA6 343 aa19.16■□□□□ 0.66
GGPS1-206ENST00000488594 DPEP2Q9H4A9 486 aa19.16■□□□□ 0.66
GGPS1-206ENST00000488594 ATP13A3Q9H7F0 1226 aa19.16■□□□□ 0.66
GGPS1-206ENST00000488594 PDFQ9HBH1 243 aa19.16■□□□□ 0.66
GGPS1-206ENST00000488594 FGF22Q9HCT0 170 aa19.16■□□□□ 0.66
GGPS1-206ENST00000488594 RNF215Q9Y6U7 377 aa19.16■□□□□ 0.66
GGPS1-206ENST00000488594 TMEM202A6NGA9 273 aa19.15■□□□□ 0.66
GGPS1-206ENST00000488594 SIGLEC16A6NMB1 481 aa19.15■□□□□ 0.66
GGPS1-206ENST00000488594 TERTO14746 1132 aaKnown RBP19.15■□□□□ 0.66
GGPS1-206ENST00000488594 BUB1BO60566 1050 aaPredicted RBP19.15■□□□□ 0.66
GGPS1-206ENST00000488594 FAM87AP0C7U9 286 aa19.15■□□□□ 0.66
GGPS1-206ENST00000488594 ITGB6P18564 788 aa19.15■□□□□ 0.66
GGPS1-206ENST00000488594 SERPINA4P29622 427 aa19.15■□□□□ 0.66
GGPS1-206ENST00000488594 CSNK1DP48730 415 aa19.15■□□□□ 0.66
GGPS1-206ENST00000488594 ZNF143P52747 638 aaPredicted RBP19.15■□□□□ 0.66
GGPS1-206ENST00000488594 POLR2FP61218 127 aaKnown RBP19.15■□□□□ 0.66
GGPS1-206ENST00000488594 TSR1Q2NL82 804 aaKnown RBP19.15■□□□□ 0.66
GGPS1-206ENST00000488594 KCTD16Q68DU8 428 aa19.15■□□□□ 0.66
GGPS1-206ENST00000488594 NYAP1Q6ZVC0 841 aa19.15■□□□□ 0.66
GGPS1-206ENST00000488594 DTX1Q86Y01 620 aa19.15■□□□□ 0.66
GGPS1-206ENST00000488594 CAMK1DQ8IU85 385 aa19.15■□□□□ 0.66
GGPS1-206ENST00000488594 SLITRK4Q8IW52 837 aa19.15■□□□□ 0.66
GGPS1-206ENST00000488594 KIAA1524Q8TCG1 905 aa19.15■□□□□ 0.66
GGPS1-206ENST00000488594 USP7Q93009 1102 aa19.15■□□□□ 0.66
GGPS1-206ENST00000488594 FUBP1Q96AE4 644 aaKnown RBP19.15■□□□□ 0.66
GGPS1-206ENST00000488594 FZD10Q9ULW2 581 aa19.15■□□□□ 0.66
GGPS1-206ENST00000488594 CYSRT1A8MQ03 144 aa19.14■□□□□ 0.65
GGPS1-206ENST00000488594 B4DGG1 531 aa19.14■□□□□ 0.65
GGPS1-206ENST00000488594 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.14■□□□□ 0.65
GGPS1-206ENST00000488594 PDE2AO00408 941 aaPredicted RBP19.14■□□□□ 0.65
GGPS1-206ENST00000488594 ZW10O43264 779 aa19.14■□□□□ 0.65
GGPS1-206ENST00000488594 SUV39H1O43463 412 aa19.14■□□□□ 0.65
GGPS1-206ENST00000488594 PRAMEF11O60813 436 aa19.14■□□□□ 0.65
GGPS1-206ENST00000488594 RECQL5O94762 991 aaPredicted RBP19.14■□□□□ 0.65
GGPS1-206ENST00000488594 DESP17661 470 aa19.14■□□□□ 0.65
GGPS1-206ENST00000488594 TRIM23P36406 574 aa19.14■□□□□ 0.65
GGPS1-206ENST00000488594 NDST2P52849 883 aa19.14■□□□□ 0.65
GGPS1-206ENST00000488594 JAM2P57087 298 aa19.14■□□□□ 0.65
GGPS1-206ENST00000488594 POLR2LP62875 67 aaKnown RBP19.14■□□□□ 0.65
GGPS1-206ENST00000488594 CLPPQ16740 277 aaPredicted RBP19.14■□□□□ 0.65
GGPS1-206ENST00000488594 MAP9Q49MG5 647 aa19.14■□□□□ 0.65
GGPS1-206ENST00000488594 CT47A1Q5JQC4 288 aaPredicted RBP19.14■□□□□ 0.65
GGPS1-206ENST00000488594 PHF19Q5T6S3 580 aa19.14■□□□□ 0.65
GGPS1-206ENST00000488594 SPECC1LQ69YQ0 1117 aa19.14■□□□□ 0.65
GGPS1-206ENST00000488594 ZFAND4Q86XD8 727 aa19.14■□□□□ 0.65
GGPS1-206ENST00000488594 ZSWIM9Q86XI8 627 aa19.14■□□□□ 0.65
GGPS1-206ENST00000488594 PLA2G15Q8NCC3 412 aa19.14■□□□□ 0.65
GGPS1-206ENST00000488594 TRIM4Q9C037 500 aa19.14■□□□□ 0.65
GGPS1-206ENST00000488594 TMEM168Q9H0V1 697 aa19.14■□□□□ 0.65
GGPS1-206ENST00000488594 LRRC19Q9H756 370 aa19.14■□□□□ 0.65
GGPS1-206ENST00000488594 SAMSN1Q9NSI8 373 aaKnown RBP19.14■□□□□ 0.65
GGPS1-206ENST00000488594 FOXJ2Q9P0K8 574 aa19.14■□□□□ 0.65
GGPS1-206ENST00000488594 HECTD1Q9ULT8 2610 aa19.14■□□□□ 0.65
GGPS1-206ENST00000488594 C9orf172C9J069 976 aa19.13■□□□□ 0.65
GGPS1-206ENST00000488594 CCP110O43303 1012 aa19.13■□□□□ 0.65
GGPS1-206ENST00000488594 CPNE6O95741 557 aa19.13■□□□□ 0.65
GGPS1-206ENST00000488594 ELFN1P0C7U0 828 aa19.13■□□□□ 0.65
GGPS1-206ENST00000488594 ETV5P41161 510 aa19.13■□□□□ 0.65
GGPS1-206ENST00000488594 STAT1P42224 750 aa19.13■□□□□ 0.65
GGPS1-206ENST00000488594 MAPK10P53779 464 aa19.13■□□□□ 0.65
GGPS1-206ENST00000488594 RALGDSQ12967 914 aa19.13■□□□□ 0.65
GGPS1-206ENST00000488594 TBR1Q16650 682 aa19.13■□□□□ 0.65
GGPS1-206ENST00000488594 CLEC16AQ2KHT3 1053 aa19.13■□□□□ 0.65
GGPS1-206ENST00000488594 VASH2Q86V25 355 aa19.13■□□□□ 0.65
GGPS1-206ENST00000488594 PIM3Q86V86 326 aa19.13■□□□□ 0.65
GGPS1-206ENST00000488594 ECHDC3Q96DC8 303 aa19.13■□□□□ 0.65
GGPS1-206ENST00000488594 PCDHB18PQ96TA0 734 aa19.13■□□□□ 0.65
GGPS1-206ENST00000488594 CNPY3Q9BT09 278 aa19.13■□□□□ 0.65
GGPS1-206ENST00000488594 CLSTN2Q9H4D0 955 aa19.13■□□□□ 0.65
GGPS1-206ENST00000488594 WDR26Q9H7D7 661 aa19.13■□□□□ 0.65
GGPS1-206ENST00000488594 MRPL40Q9NQ50 206 aaKnown RBP19.13■□□□□ 0.65
GGPS1-206ENST00000488594 FAM207AQ9NSI2 230 aaPredicted RBP19.13■□□□□ 0.65
GGPS1-206ENST00000488594 TAB2Q9NYJ8 693 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms