RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 TTLL3Q9Y4R7 772 aa17.83■□□□□ 0.44
ITGB1-215ENST00000488494 OR1A2Q9Y585 309 aa17.83■□□□□ 0.44
ITGB1-215ENST00000488494 CFAP69A5D8W1 941 aa17.82■□□□□ 0.44
ITGB1-215ENST00000488494 RECQL5O94762 991 aaPredicted RBP17.82■□□□□ 0.44
ITGB1-215ENST00000488494 KRT1P04264 644 aa17.82■□□□□ 0.44
ITGB1-215ENST00000488494 CDK4P11802 303 aa17.82■□□□□ 0.44
ITGB1-215ENST00000488494 MYF5P13349 255 aa17.82■□□□□ 0.44
ITGB1-215ENST00000488494 KDELR1P24390 212 aa17.82■□□□□ 0.44
ITGB1-215ENST00000488494 HNF1BP35680 557 aa17.82■□□□□ 0.44
ITGB1-215ENST00000488494 ARHGAP25P42331 645 aa17.82■□□□□ 0.44
ITGB1-215ENST00000488494 INPP5AQ14642 412 aa17.82■□□□□ 0.44
ITGB1-215ENST00000488494 NFATC4Q14934 902 aa17.82■□□□□ 0.44
ITGB1-215ENST00000488494 AGERQ15109 404 aa17.82■□□□□ 0.44
ITGB1-215ENST00000488494 IFI16Q16666 785 aaKnown RBP17.82■□□□□ 0.44
ITGB1-215ENST00000488494 DEFB133Q30KQ1 61 aa17.82■□□□□ 0.44
ITGB1-215ENST00000488494 PRRT3Q5FWE3 981 aa17.82■□□□□ 0.44
ITGB1-215ENST00000488494 RALGPS1Q5JS13 557 aa17.82■□□□□ 0.44
ITGB1-215ENST00000488494 LIPIQ6XZB0 460 aa17.82■□□□□ 0.44
ITGB1-215ENST00000488494 TMPRSS12Q86WS5 348 aa17.82■□□□□ 0.44
ITGB1-215ENST00000488494 PLA2G15Q8NCC3 412 aa17.82■□□□□ 0.44
ITGB1-215ENST00000488494 BTN2A2Q8WVV5 523 aa17.82■□□□□ 0.44
ITGB1-215ENST00000488494 MAML1Q92585 1016 aa17.82■□□□□ 0.44
ITGB1-215ENST00000488494 APOLD1Q96LR9 279 aa17.82■□□□□ 0.44
ITGB1-215ENST00000488494 SEMA3CQ99985 751 aa17.82■□□□□ 0.44
ITGB1-215ENST00000488494 DUSP23Q9BVJ7 150 aa17.82■□□□□ 0.44
ITGB1-215ENST00000488494 SLC13A1Q9BZW2 595 aa17.82■□□□□ 0.44
ITGB1-215ENST00000488494 POLR1EQ9GZS1 481 aaKnown RBP17.82■□□□□ 0.44
ITGB1-215ENST00000488494 INTUQ9ULD6 942 aa17.82■□□□□ 0.44
ITGB1-215ENST00000488494 CFAP47Q6ZTR5 3102 aa17.81■□□□□ 0.44
ITGB1-215ENST00000488494 DSPP15924 2871 aaKnown RBP17.81■□□□□ 0.44
ITGB1-215ENST00000488494 A0A1W2PQ67 120 aa17.81■□□□□ 0.44
ITGB1-215ENST00000488494 CKMT1AP12532 417 aa17.81■□□□□ 0.44
ITGB1-215ENST00000488494 GM2AP17900 193 aa17.81■□□□□ 0.44
ITGB1-215ENST00000488494 VIPR1P32241 457 aa17.81■□□□□ 0.44
ITGB1-215ENST00000488494 DSC2Q02487 901 aa17.81■□□□□ 0.44
ITGB1-215ENST00000488494 PPARDQ03181 441 aa17.81■□□□□ 0.44
ITGB1-215ENST00000488494 ITKQ08881 620 aa17.81■□□□□ 0.44
ITGB1-215ENST00000488494 MTM1Q13496 603 aa17.81■□□□□ 0.44
ITGB1-215ENST00000488494 ACOX1Q15067 660 aa17.81■□□□□ 0.44
ITGB1-215ENST00000488494 CNGA3Q16281 694 aa17.81■□□□□ 0.44
ITGB1-215ENST00000488494 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.81■□□□□ 0.44
ITGB1-215ENST00000488494 ZNF830Q96NB3 372 aaPredicted RBP17.81■□□□□ 0.44
ITGB1-215ENST00000488494 RBSNQ9H1K0 784 aa17.81■□□□□ 0.44
ITGB1-215ENST00000488494 DTLQ9NZJ0 730 aa17.81■□□□□ 0.44
ITGB1-215ENST00000488494 SPASTQ9UBP0 616 aa17.81■□□□□ 0.44
ITGB1-215ENST00000488494 HYOU1Q9Y4L1 999 aa17.81■□□□□ 0.44
ITGB1-215ENST00000488494 CSNK1G3Q9Y6M4 447 aa17.81■□□□□ 0.44
ITGB1-215ENST00000488494 ITPR1Q14643 2758 aa17.81■□□□□ 0.44
ITGB1-215ENST00000488494 ARID1BQ8NFD5 2236 aaPredicted RBP17.8■□□□□ 0.44
ITGB1-215ENST00000488494 ANKRD11Q6UB99 2663 aaPredicted RBP17.8■□□□□ 0.44
ITGB1-215ENST00000488494 TDRD6O60522 2096 aaKnown RBP17.8■□□□□ 0.44
ITGB1-215ENST00000488494 ZFHX4Q86UP3 3567 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 LY6G6EA0A0G2JKS1 128 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 NPIPB15A6NHN6 443 aaPredicted RBP17.8■□□□□ 0.44
ITGB1-215ENST00000488494 C3orf70A6NLC5 250 aaPredicted RBP17.8■□□□□ 0.44
ITGB1-215ENST00000488494 ZNF487B1APH4 448 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 MATN3O15232 486 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 GCATO75600 419 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 PGLSO95336 258 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 TNNT1P13805 278 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 MX2P20592 715 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 LHCGRP22888 699 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 HTR1BP28222 390 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 PEX5P50542 639 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 ZNF75DP51815 510 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 SLC10A2Q12908 348 aaPredicted RBP17.8■□□□□ 0.44
ITGB1-215ENST00000488494 C1orf61Q13536 156 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 TCEA2Q15560 299 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 ALG11Q2TAA5 492 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 ARMC12Q5T9G4 340 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 FAXCQ5TGI0 409 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 ZCCHC8Q6NZY4 707 aaKnown RBP17.8■□□□□ 0.44
ITGB1-215ENST00000488494 NYAP1Q6ZVC0 841 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 USP45Q70EL2 814 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 HID1Q8IV36 788 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 PLD5Q8N7P1 536 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 FAM181AQ8N9Y4 354 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 MDM1Q8TC05 714 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.8■□□□□ 0.44
ITGB1-215ENST00000488494 FATE1Q969F0 183 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 HDAC11Q96DB2 347 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 NUS1Q96E22 293 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 TSGA13Q96PP4 275 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 RNF157Q96PX1 679 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 APOOQ9BUR5 198 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 CCDC86Q9H6F5 360 aaKnown RBP17.8■□□□□ 0.44
ITGB1-215ENST00000488494 KLQ9UEF7 1012 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 RAI2Q9Y5P3 530 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 U3KQA8 63 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 LRP4O75096 1905 aa17.8■□□□□ 0.44
ITGB1-215ENST00000488494 SPOPO43791 374 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 HEXIM1O94992 359 aaKnown RBP17.79■□□□□ 0.44
ITGB1-215ENST00000488494 CAPNS1P04632 268 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 HLA-DQB2P05538 268 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 CELA2BP08218 269 aaPredicted RBP17.79■□□□□ 0.44
ITGB1-215ENST00000488494 CCNB1P14635 433 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 JUPP14923 745 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 CTPS1P17812 591 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 CCNCP24863 283 aa17.79■□□□□ 0.44
ITGB1-215ENST00000488494 NFKBIAP25963 317 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms