RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 GOLGA6L19H0YKK7 550 aa19.43■□□□□ 0.7
CD55-209ENST00000488171 MAFKO60675 156 aa19.43■□□□□ 0.7
CD55-209ENST00000488171 CSO75390 466 aaKnown RBP19.43■□□□□ 0.7
CD55-209ENST00000488171 ANXA6P08133 673 aa19.43■□□□□ 0.7
CD55-209ENST00000488171 CR2P20023 1033 aa19.43■□□□□ 0.7
CD55-209ENST00000488171 BLKP51451 505 aa19.43■□□□□ 0.7
CD55-209ENST00000488171 MTM1Q13496 603 aa19.43■□□□□ 0.7
CD55-209ENST00000488171 PERM1Q5SV97 790 aa19.43■□□□□ 0.7
CD55-209ENST00000488171 KCTD16Q68DU8 428 aa19.43■□□□□ 0.7
CD55-209ENST00000488171 ALKBH5Q6P6C2 394 aaKnown RBP19.43■□□□□ 0.7
CD55-209ENST00000488171 ENPP7Q6UWV6 458 aa19.43■□□□□ 0.7
CD55-209ENST00000488171 DPPA4Q7L190 304 aa19.43■□□□□ 0.7
CD55-209ENST00000488171 HID1Q8IV36 788 aa19.43■□□□□ 0.7
CD55-209ENST00000488171 SNIP1Q8TAD8 396 aaKnown RBP19.43■□□□□ 0.7
CD55-209ENST00000488171 IFNKQ9P0W0 207 aa19.43■□□□□ 0.7
CD55-209ENST00000488171 NENFQ9UMX5 172 aa19.43■□□□□ 0.7
CD55-209ENST00000488171 LUC7L2Q9Y383 392 aaKnown RBP19.43■□□□□ 0.7
CD55-209ENST00000488171 HTRA2O43464 458 aaPredicted RBP19.42■□□□□ 0.7
CD55-209ENST00000488171 RECQL5O94762 991 aaPredicted RBP19.42■□□□□ 0.7
CD55-209ENST00000488171 IL4RP24394 825 aa19.42■□□□□ 0.7
CD55-209ENST00000488171 ITPKBP27987 946 aa19.42■□□□□ 0.7
CD55-209ENST00000488171 POLR2LP62875 67 aaKnown RBP19.42■□□□□ 0.7
CD55-209ENST00000488171 ZNF235Q14590 738 aa19.42■□□□□ 0.7
CD55-209ENST00000488171 NFKBIBQ15653 356 aa19.42■□□□□ 0.7
CD55-209ENST00000488171 SPOCK2Q92563 424 aa19.42■□□□□ 0.7
CD55-209ENST00000488171 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.41■□□□□ 0.7
CD55-209ENST00000488171 A8MX80 341 aa19.41■□□□□ 0.7
CD55-209ENST00000488171 USP12O75317 370 aa19.41■□□□□ 0.7
CD55-209ENST00000488171 RASGRP1O95267 797 aa19.41■□□□□ 0.7
CD55-209ENST00000488171 ELFN1P0C7U0 828 aa19.41■□□□□ 0.7
CD55-209ENST00000488171 HTR1BP28222 390 aa19.41■□□□□ 0.7
CD55-209ENST00000488171 HSPA9P38646 679 aaKnown RBP19.41■□□□□ 0.7
CD55-209ENST00000488171 ABCG1P45844 678 aa19.41■□□□□ 0.7
CD55-209ENST00000488171 SRP54P61011 504 aaKnown RBP19.41■□□□□ 0.7
CD55-209ENST00000488171 ELOCQ15369 112 aa19.41■□□□□ 0.7
CD55-209ENST00000488171 TBC1D25Q3MII6 688 aa19.41■□□□□ 0.7
CD55-209ENST00000488171 CCDC122Q5T0U0 273 aa19.41■□□□□ 0.7
CD55-209ENST00000488171 CRTC1Q6UUV9 634 aa19.41■□□□□ 0.7
CD55-209ENST00000488171 FSTL5Q8N475 847 aaPredicted RBP19.41■□□□□ 0.7
CD55-209ENST00000488171 FAM71BQ8TC56 605 aa19.41■□□□□ 0.7
CD55-209ENST00000488171 FGF11Q92914 225 aa19.41■□□□□ 0.7
CD55-209ENST00000488171 GLMNQ92990 594 aa19.41■□□□□ 0.7
CD55-209ENST00000488171 WDR92Q96MX6 357 aa19.41■□□□□ 0.7
CD55-209ENST00000488171 NUDCD1Q96RS6 583 aa19.41■□□□□ 0.7
CD55-209ENST00000488171 MGME1Q9BQP7 344 aa19.41■□□□□ 0.7
CD55-209ENST00000488171 B4GALT6Q9UBX8 382 aa19.41■□□□□ 0.7
CD55-209ENST00000488171 KLQ9UEF7 1012 aa19.41■□□□□ 0.7
CD55-209ENST00000488171 PCDHGC4Q9Y5F7 938 aa19.41■□□□□ 0.7
CD55-209ENST00000488171 LOC400499M0QZD8 3231 aa19.4■□□□□ 0.7
CD55-209ENST00000488171 CACNA1GO43497 2377 aa19.4■□□□□ 0.7
CD55-209ENST00000488171 CASC3O15234 703 aaKnown RBP19.4■□□□□ 0.7
CD55-209ENST00000488171 MPOP05164 745 aa19.4■□□□□ 0.7
CD55-209ENST00000488171 CD48P09326 243 aa19.4■□□□□ 0.7
CD55-209ENST00000488171 CASP14P31944 242 aa19.4■□□□□ 0.7
CD55-209ENST00000488171 ACTN2P35609 894 aa19.4■□□□□ 0.7
CD55-209ENST00000488171 RPIAP49247 311 aa19.4■□□□□ 0.7
CD55-209ENST00000488171 ARSEP51690 589 aa19.4■□□□□ 0.7
CD55-209ENST00000488171 CDH6P55285 790 aa19.4■□□□□ 0.7
CD55-209ENST00000488171 MMRN1Q13201 1228 aa19.4■□□□□ 0.7
CD55-209ENST00000488171 TCEA2Q15560 299 aa19.4■□□□□ 0.7
CD55-209ENST00000488171 ISXQ2M1V0 245 aa19.4■□□□□ 0.7
CD55-209ENST00000488171 ZSCAN23Q3MJ62 389 aa19.4■□□□□ 0.7
CD55-209ENST00000488171 RD3Q7Z3Z2 195 aa19.4■□□□□ 0.7
CD55-209ENST00000488171 CPNE8Q86YQ8 564 aa19.4■□□□□ 0.7
CD55-209ENST00000488171 PELI3Q8N2H9 469 aa19.4■□□□□ 0.7
CD55-209ENST00000488171 ATPAF2Q8N5M1 289 aa19.4■□□□□ 0.7
CD55-209ENST00000488171 PAF1Q8N7H5 531 aa19.4■□□□□ 0.7
CD55-209ENST00000488171 PCDH19Q8TAB3 1148 aa19.4■□□□□ 0.7
CD55-209ENST00000488171 FUBP1Q96AE4 644 aaKnown RBP19.4■□□□□ 0.7
CD55-209ENST00000488171 PDXPQ96GD0 296 aa19.4■□□□□ 0.7
CD55-209ENST00000488171 NOD2Q9HC29 1040 aa19.4■□□□□ 0.7
CD55-209ENST00000488171 RCOR3Q9P2K3 495 aaPredicted RBP19.4■□□□□ 0.7
CD55-209ENST00000488171 ASXL3Q9C0F0 2248 aa19.39■□□□□ 0.7
CD55-209ENST00000488171 MYO1FO00160 1098 aa19.39■□□□□ 0.69
CD55-209ENST00000488171 SOCS5O75159 536 aa19.39■□□□□ 0.69
CD55-209ENST00000488171 ALPIP09923 528 aa19.39■□□□□ 0.69
CD55-209ENST00000488171 CTSEP14091 401 aa19.39■□□□□ 0.69
CD55-209ENST00000488171 SERPINB6P35237 376 aa19.39■□□□□ 0.69
CD55-209ENST00000488171 KIAA1024LP59773 190 aa19.39■□□□□ 0.69
CD55-209ENST00000488171 MAXP61244 160 aa19.39■□□□□ 0.69
CD55-209ENST00000488171 GABREP78334 506 aa19.39■□□□□ 0.69
CD55-209ENST00000488171 KRT81Q14533 505 aa19.39■□□□□ 0.69
CD55-209ENST00000488171 ESRP1Q6NXG1 681 aaKnown RBP19.39■□□□□ 0.69
CD55-209ENST00000488171 LVRNQ6Q4G3 990 aa19.39■□□□□ 0.69
CD55-209ENST00000488171 ATL2Q8NHH9 583 aa19.39■□□□□ 0.69
CD55-209ENST00000488171 TPCN2Q8NHX9 752 aa19.39■□□□□ 0.69
CD55-209ENST00000488171 ZNF564Q8TBZ8 553 aaPredicted RBP19.39■□□□□ 0.69
CD55-209ENST00000488171 OR1E3Q8WZA6 343 aa19.39■□□□□ 0.69
CD55-209ENST00000488171 NAT6Q93015 286 aa19.39■□□□□ 0.69
CD55-209ENST00000488171 COQ10AQ96MF6 247 aa19.39■□□□□ 0.69
CD55-209ENST00000488171 XPO4Q9C0E2 1151 aaKnown RBP19.39■□□□□ 0.69
CD55-209ENST00000488171 PADI4Q9UM07 663 aa19.39■□□□□ 0.69
CD55-209ENST00000488171 DOLKQ9UPQ8 538 aa19.39■□□□□ 0.69
CD55-209ENST00000488171 DGKBQ9Y6T7 804 aa19.39■□□□□ 0.69
CD55-209ENST00000488171 A0A1W2PNU3 283 aaPredicted RBP19.38■□□□□ 0.69
CD55-209ENST00000488171 TMEM202A6NGA9 273 aa19.38■□□□□ 0.69
CD55-209ENST00000488171 RRP8O43159 456 aaKnown RBP19.38■□□□□ 0.69
CD55-209ENST00000488171 DXOO77932 396 aaKnown RBP19.38■□□□□ 0.69
CD55-209ENST00000488171 HNRNPH3P31942 346 aaKnown RBP19.38■□□□□ 0.69
CD55-209ENST00000488171 TRIM23P36406 574 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms