RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 SCINQ9Y6U3 715 aa3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 MAPKBP1O60336 1514 aa3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 KIF21BO75037 1637 aa3.99□□□□□ -1.77
ECHDC1-217ENST00000488087 A0A1W2PQM1 296 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 NPIPB15A6NHN6 443 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 PRSS47A8MTI9 375 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 USP17L23D6RBM5 183 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 SEC14L5O43304 696 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 ZBED4O75132 1171 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 SEC14L2O76054 403 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 NDUFB4O95168 129 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 SCGB1D1O95968 90 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 HOXA11P31270 313 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 ARRB2P32121 409 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 MLH1P40692 756 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 PCYT1AP49585 367 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 LINC00205P59089 165 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 DCAF7P61962 342 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 RPL7AP62424 266 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 SLC20A2Q08357 652 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 PDE1CQ14123 709 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 CTTNQ14247 550 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 KRT32Q14532 448 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 CCDC30Q5VVM6 783 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 HAUS3Q68CZ6 603 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 TYW3Q6IPR3 259 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 CDC73Q6P1J9 531 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 LCTLQ6UWM7 567 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 GSTA5Q7RTV2 222 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 FBXL14Q8N1E6 418 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 PRR26Q8N8Z3 221 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 ARRDC2Q8TBH0 407 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 GTF3C6Q969F1 213 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 PABPC5Q96DU9 382 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 TXNDC15Q96J42 360 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 ZNF570Q96NI8 536 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 NEUROD6Q96NK8 337 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 NAP1L5Q96NT1 182 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 GLIS2Q9BZE0 524 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 CLK4Q9HAZ1 481 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 MAGEE1Q9HCI5 957 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 KRT84Q9NSB2 600 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 TBC1D22BQ9NU19 505 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 MKLN1Q9UL63 735 aa3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 AAR2Q9Y312 384 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 LSM4Q9Y4Z0 139 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-217ENST00000488087 CLIP1P30622 1438 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 A0A1B0GVM2 712 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 FSD2A1L4K1 749 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 ANKRD18BA2A2Z9 1011 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 PGPEP1LA6NFU8 196 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 IFNL4K9M1U5 179 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 TIMM23O14925 209 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 KLK8O60259 260 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 CLEC3BP05452 202 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 LDHCP07864 332 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 HOXC6P09630 235 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 SNHG28P0DPA3 235 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 ITGAXP20702 1163 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 C21orf33P30042 268 aaPredicted RBP3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 BSGP35613 385 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 PIGAP37287 484 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 CDKN2AP42771 156 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 AMTP48728 403 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 RPS3AP61247 264 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 ABATP80404 500 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 ADORA2A-AS1P86434 159 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 DSC1Q08554 894 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 GOLGA8DPQ0D2H9 430 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 TMEM115Q12893 351 aaPredicted RBP3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 NEDD9Q14511 834 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 TSSK4Q6SA08 328 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 C9orf47Q6ZRZ4 202 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 NEK10Q6ZWH5 1172 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 SHFQ7M4L6 423 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 FJX1Q86VR8 437 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 SCCPDHQ8NBX0 429 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 ANP32BQ92688 251 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 SNAPC3Q92966 411 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 ERGIC1Q969X5 290 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 NTPCRQ9BSD7 190 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 KIF9Q9HAQ2 790 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 BRF2Q9HAW0 419 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 SLC6A13Q9NSD5 602 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 DIAPH3Q9NSV4 1193 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 LIMA1Q9UHB6 759 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 HAO1Q9UJM8 370 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 NCOA2Q15596 1464 aa3.97□□□□□ -1.77
ECHDC1-217ENST00000488087 CCDC144AA2RUR9 1427 aa3.96□□□□□ -1.77
ECHDC1-217ENST00000488087 CKAP5Q14008 2032 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 IGHV4-28A0A0C4DH34 117 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 PI4KAP2A4QPH2 592 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 ZNF500O60304 480 aaPredicted RBP3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 USO1O60763 962 aaKnown RBP3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 SERPINI2O75830 405 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 SOX30O94993 753 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 VNN2O95498 520 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 NTN1O95631 604 aa3.96□□□□□ -1.78
ECHDC1-217ENST00000488087 ALPLP05186 524 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms