RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 WWOXQ9NZC7 414 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 NAALADL1Q9UQQ1 740 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 SCINQ9Y6U3 715 aa4.14□□□□□ -1.75
TTC3-220ENST00000487711 A0A1W2PQM1 296 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 IFNL4K9M1U5 179 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 WNT9BO14905 357 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 SEC14L5O43304 696 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 SEC31AO94979 1220 aaKnown RBP4.13□□□□□ -1.75
TTC3-220ENST00000487711 SSTR2P30874 369 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 CPOXP36551 454 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 CASP6P55212 293 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 EIF3BP55884 814 aaKnown RBP4.13□□□□□ -1.75
TTC3-220ENST00000487711 TUBA1BP68363 451 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 GRSF1Q12849 480 aaKnown RBP eCLIP4.13□□□□□ -1.75
TTC3-220ENST00000487711 MYBPHQ13203 477 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 SLC39A14Q15043 492 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 GSTA3Q16772 222 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 SGO1Q5FBB7 561 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 INTS11Q5TA45 600 aaKnown RBP4.13□□□□□ -1.75
TTC3-220ENST00000487711 JAKMIP3Q5VZ66 844 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 FBXO46Q6PJ61 603 aaPredicted RBP4.13□□□□□ -1.75
TTC3-220ENST00000487711 B3GNT6Q6ZMB0 384 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 SLC35F3Q8IY50 421 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 PGBD5Q8N414 524 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 ZBTB2Q8N680 514 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 AGBL3Q8NEM8 1001 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 HUS1BQ8NHY5 278 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 PABPC5Q96DU9 382 aaKnown RBP4.13□□□□□ -1.75
TTC3-220ENST00000487711 OR1F2PQ96R84 312 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 SLC26A6Q9BXS9 759 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 GLIS2Q9BZE0 524 aaPredicted RBP4.13□□□□□ -1.75
TTC3-220ENST00000487711 PCDHB16Q9NRJ7 776 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 SLC9A2Q9UBY0 812 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 RCOR1Q9UKL0 485 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 TMEM98Q9Y2Y6 226 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 PCDHGB1Q9Y5G3 927 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 SNX9Q9Y5X1 595 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 NFS1Q9Y697 457 aa4.13□□□□□ -1.75
TTC3-220ENST00000487711 IGLV5-37A0A075B6J1 123 aa4.12□□□□□ -1.75
TTC3-220ENST00000487711 BTBD18B2RXH4 712 aa4.12□□□□□ -1.75
TTC3-220ENST00000487711 USP17L23D6RBM5 183 aa4.12□□□□□ -1.75
TTC3-220ENST00000487711 ZBTB11O95625 1053 aaPredicted RBP4.12□□□□□ -1.75
TTC3-220ENST00000487711 EPHA8P29322 1005 aaPredicted RBP4.12□□□□□ -1.75
TTC3-220ENST00000487711 HNRNPH1P31943 449 aaKnown RBP4.12□□□□□ -1.75
TTC3-220ENST00000487711 STX2P32856 288 aa4.12□□□□□ -1.75
TTC3-220ENST00000487711 SHMT1P34896 483 aa4.12□□□□□ -1.75
TTC3-220ENST00000487711 KRT9P35527 623 aa4.12□□□□□ -1.75
TTC3-220ENST00000487711 SORDQ00796 357 aa4.12□□□□□ -1.75
TTC3-220ENST00000487711 KIF5AQ12840 1032 aa4.12□□□□□ -1.75
TTC3-220ENST00000487711 EFNB3Q15768 340 aa4.12□□□□□ -1.75
TTC3-220ENST00000487711 CCDC70Q6NSX1 233 aa4.12□□□□□ -1.75
TTC3-220ENST00000487711 RHBDF2Q6PJF5 856 aa4.12□□□□□ -1.75
TTC3-220ENST00000487711 CRELD2Q6UXH1 353 aaPredicted RBP4.12□□□□□ -1.75
TTC3-220ENST00000487711 ATF7IPQ6VMQ6 1270 aa4.12□□□□□ -1.75
TTC3-220ENST00000487711 LINGO2Q7L985 606 aa4.12□□□□□ -1.75
TTC3-220ENST00000487711 BHLHA9Q7RTU4 235 aa4.12□□□□□ -1.75
TTC3-220ENST00000487711 R3HCC1LQ7Z5L2 792 aaKnown RBP4.12□□□□□ -1.75
TTC3-220ENST00000487711 RBM23Q86U06 439 aaKnown RBP4.12□□□□□ -1.75
TTC3-220ENST00000487711 DSELQ8IZU8 1212 aa4.12□□□□□ -1.75
TTC3-220ENST00000487711 CNTROBQ8N137 903 aa4.12□□□□□ -1.75
TTC3-220ENST00000487711 PPM1MQ96MI6 270 aa4.12□□□□□ -1.75
TTC3-220ENST00000487711 NR1H4Q96RI1 486 aaPredicted RBP4.12□□□□□ -1.75
TTC3-220ENST00000487711 KXD1Q9BQD3 176 aa4.12□□□□□ -1.75
TTC3-220ENST00000487711 KRTAP9-8Q9BYQ0 159 aa4.12□□□□□ -1.75
TTC3-220ENST00000487711 PDCL3Q9H2J4 239 aa4.12□□□□□ -1.75
TTC3-220ENST00000487711 PLEKHA4Q9H4M7 779 aa4.12□□□□□ -1.75
TTC3-220ENST00000487711 PRKRIP1Q9H875 184 aaPredicted RBP4.12□□□□□ -1.75
TTC3-220ENST00000487711 GPR108Q9NPR9 543 aa4.12□□□□□ -1.75
TTC3-220ENST00000487711 TAS2R10Q9NYW0 307 aa4.12□□□□□ -1.75
TTC3-220ENST00000487711 SLCO3A1Q9UIG8 710 aa4.12□□□□□ -1.75
TTC3-220ENST00000487711 FBXO9Q9UK97 447 aaPredicted RBP4.12□□□□□ -1.75
TTC3-220ENST00000487711 AAR2Q9Y312 384 aaKnown RBP4.12□□□□□ -1.75
TTC3-220ENST00000487711 ATXN2Q99700 1313 aaKnown RBP4.12□□□□□ -1.75
TTC3-220ENST00000487711 A0A1W2PPH5 198 aa4.11□□□□□ -1.75
TTC3-220ENST00000487711 PLSCR5A0PG75 271 aa4.11□□□□□ -1.75
TTC3-220ENST00000487711 TMEM202A6NGA9 273 aa4.11□□□□□ -1.75
TTC3-220ENST00000487711 KRTAP29-1A8MX34 341 aaPredicted RBP4.11□□□□□ -1.75
TTC3-220ENST00000487711 TAF4O00268 1085 aa4.11□□□□□ -1.75
TTC3-220ENST00000487711 GAGE7O76087 117 aa4.11□□□□□ -1.75
TTC3-220ENST00000487711 GAGE12FP0CL80 117 aa4.11□□□□□ -1.75
TTC3-220ENST00000487711 GAGE12GP0CL81 117 aa4.11□□□□□ -1.75
TTC3-220ENST00000487711 GAGE12IP0CL82 117 aa4.11□□□□□ -1.75
TTC3-220ENST00000487711 IGHV4-30-4P0DP06 118 aa4.11□□□□□ -1.75
TTC3-220ENST00000487711 UBL4AP11441 157 aa4.11□□□□□ -1.75
TTC3-220ENST00000487711 DAOP14920 347 aa4.11□□□□□ -1.75
TTC3-220ENST00000487711 ELF1P32519 619 aa4.11□□□□□ -1.75
TTC3-220ENST00000487711 EIF2S3P41091 472 aaKnown RBP4.11□□□□□ -1.75
TTC3-220ENST00000487711 RARSP54136 660 aaKnown RBP4.11□□□□□ -1.75
TTC3-220ENST00000487711 GAGE1Q13065 139 aa4.11□□□□□ -1.75
TTC3-220ENST00000487711 GAGE4Q13068 117 aa4.11□□□□□ -1.75
TTC3-220ENST00000487711 TBX2Q13207 712 aaPredicted RBP4.11□□□□□ -1.75
TTC3-220ENST00000487711 SF3B4Q15427 424 aaKnown RBP eCLIP4.11□□□□□ -1.75
TTC3-220ENST00000487711 CALCRLQ16602 461 aa4.11□□□□□ -1.75
TTC3-220ENST00000487711 AMZ1Q400G9 498 aa4.11□□□□□ -1.75
TTC3-220ENST00000487711 PPP6R3Q5H9R7 873 aaPredicted RBP4.11□□□□□ -1.75
TTC3-220ENST00000487711 FAM69BQ5VUD6 431 aa4.11□□□□□ -1.75
TTC3-220ENST00000487711 INO80CQ6PI98 192 aaPredicted RBP4.11□□□□□ -1.75
TTC3-220ENST00000487711 PRSS57Q6UWY2 283 aa4.11□□□□□ -1.75
TTC3-220ENST00000487711 MTSS1LQ765P7 747 aa4.11□□□□□ -1.75
TTC3-220ENST00000487711 C16orf82Q7Z2V1 217 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms