RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 NLGN3Q9NZ94 848 aa20.53■□□□□ 0.88
HDAC4-209ENST00000487617 DTLQ9NZJ0 730 aa20.53■□□□□ 0.88
HDAC4-209ENST00000487617 ZNF487B1APH4 448 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 AQP9O43315 295 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 SPOPO43791 374 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 GIMD1P0DJR0 217 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 COMTP21964 271 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 NFKBIAP25963 317 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 PEX5P50542 639 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 SPA17Q15506 151 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 ARMC12Q5T9G4 340 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 MARCH9Q86YJ5 346 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 RHOT1Q8IXI2 618 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 CCDC170Q8IYT3 715 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 PHACTR4Q8IZ21 702 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 RBFAQ8N0V3 343 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.52■□□□□ 0.88
HDAC4-209ENST00000487617 KDF1Q8NAX2 398 aaPredicted RBP20.52■□□□□ 0.88
HDAC4-209ENST00000487617 LMX1AQ8TE12 382 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 FATE1Q969F0 183 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 APOOQ9BUR5 198 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 DUSP23Q9BVJ7 150 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 HAUS2Q9NVX0 235 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 SPASTQ9UBP0 616 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 APOBEC3BQ9UH17 382 aaKnown RBP20.52■□□□□ 0.88
HDAC4-209ENST00000487617 PHTF1Q9UMS5 762 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 TTLL3Q9Y4R7 772 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 OR1A2Q9Y585 309 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 PCDHA13Q9Y5I0 950 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 RAI2Q9Y5P3 530 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 CSNK1G3Q9Y6M4 447 aa20.52■□□□□ 0.88
HDAC4-209ENST00000487617 FAM149AA5PLN7 773 aa20.51■□□□□ 0.87
HDAC4-209ENST00000487617 C3orf70A6NLC5 250 aaPredicted RBP20.51■□□□□ 0.87
HDAC4-209ENST00000487617 K7ESM1 405 aa20.51■□□□□ 0.87
HDAC4-209ENST00000487617 PGLSO95336 258 aa20.51■□□□□ 0.87
HDAC4-209ENST00000487617 LCA5LO95447 670 aa20.51■□□□□ 0.87
HDAC4-209ENST00000487617 CCNB1P14635 433 aa20.51■□□□□ 0.87
HDAC4-209ENST00000487617 ACP1P24666 158 aa20.51■□□□□ 0.87
HDAC4-209ENST00000487617 HTR1BP28222 390 aa20.51■□□□□ 0.87
HDAC4-209ENST00000487617 VIPR1P32241 457 aa20.51■□□□□ 0.87
HDAC4-209ENST00000487617 CYLC1P35663 651 aaPredicted RBP20.51■□□□□ 0.87
HDAC4-209ENST00000487617 PPARDQ03181 441 aa20.51■□□□□ 0.87
HDAC4-209ENST00000487617 ILKQ13418 452 aa20.51■□□□□ 0.87
HDAC4-209ENST00000487617 MTM1Q13496 603 aa20.51■□□□□ 0.87
HDAC4-209ENST00000487617 ACOX1Q15067 660 aa20.51■□□□□ 0.87
HDAC4-209ENST00000487617 FAXCQ5TGI0 409 aa20.51■□□□□ 0.87
HDAC4-209ENST00000487617 GAS2L3Q86XJ1 694 aa20.51■□□□□ 0.87
HDAC4-209ENST00000487617 VSIG1Q86XK7 387 aa20.51■□□□□ 0.87
HDAC4-209ENST00000487617 CCDC13Q8IYE1 715 aa20.51■□□□□ 0.87
HDAC4-209ENST00000487617 PLD5Q8N7P1 536 aa20.51■□□□□ 0.87
HDAC4-209ENST00000487617 RNF25Q96BH1 459 aaPredicted RBP20.51■□□□□ 0.87
HDAC4-209ENST00000487617 HDAC11Q96DB2 347 aa20.51■□□□□ 0.87
HDAC4-209ENST00000487617 PANX2Q96RD6 677 aa20.51■□□□□ 0.87
HDAC4-209ENST00000487617 SLC13A1Q9BZW2 595 aa20.51■□□□□ 0.87
HDAC4-209ENST00000487617 TCEAL2Q9H3H9 227 aaPredicted RBP20.51■□□□□ 0.87
HDAC4-209ENST00000487617 DDX56Q9NY93 547 aaKnown RBP20.51■□□□□ 0.87
HDAC4-209ENST00000487617 AMACRQ9UHK6 382 aa20.51■□□□□ 0.87
HDAC4-209ENST00000487617 PNMA8BQ9ULN7 279 aaPredicted RBP20.51■□□□□ 0.87
HDAC4-209ENST00000487617 HEY1Q9Y5J3 304 aa20.51■□□□□ 0.87
HDAC4-209ENST00000487617 MAP1BP46821 2468 aaKnown RBP20.51■□□□□ 0.87
HDAC4-209ENST00000487617 APOL1O14791 398 aa20.5■□□□□ 0.87
HDAC4-209ENST00000487617 CYP2A6P11509 494 aaPredicted RBP20.5■□□□□ 0.87
HDAC4-209ENST00000487617 DSC2Q02487 901 aa20.5■□□□□ 0.87
HDAC4-209ENST00000487617 NFATC4Q14934 902 aa20.5■□□□□ 0.87
HDAC4-209ENST00000487617 PRRT3Q5FWE3 981 aa20.5■□□□□ 0.87
HDAC4-209ENST00000487617 SLC9A4Q6AI14 798 aa20.5■□□□□ 0.87
HDAC4-209ENST00000487617 ENPP7Q6UWV6 458 aa20.5■□□□□ 0.87
HDAC4-209ENST00000487617 TMPRSS12Q86WS5 348 aa20.5■□□□□ 0.87
HDAC4-209ENST00000487617 RFX6Q8HWS3 928 aa20.5■□□□□ 0.87
HDAC4-209ENST00000487617 PLA2G15Q8NCC3 412 aa20.5■□□□□ 0.87
HDAC4-209ENST00000487617 ZCCHC14Q8WYQ9 949 aaKnown RBP20.5■□□□□ 0.87
HDAC4-209ENST00000487617 APOLD1Q96LR9 279 aa20.5■□□□□ 0.87
HDAC4-209ENST00000487617 LUC7LQ9NQ29 371 aaKnown RBP20.5■□□□□ 0.87
HDAC4-209ENST00000487617 EPG5Q9HCE0 2579 aa20.49■□□□□ 0.87
HDAC4-209ENST00000487617 ARID1BQ8NFD5 2236 aaPredicted RBP20.49■□□□□ 0.87
HDAC4-209ENST00000487617 HEXIM1O94992 359 aaKnown RBP20.49■□□□□ 0.87
HDAC4-209ENST00000487617 JUPP14923 745 aa20.49■□□□□ 0.87
HDAC4-209ENST00000487617 ZFXP17010 805 aaPredicted RBP20.49■□□□□ 0.87
HDAC4-209ENST00000487617 GM2AP17900 193 aa20.49■□□□□ 0.87
HDAC4-209ENST00000487617 CES1P23141 567 aa20.49■□□□□ 0.87
HDAC4-209ENST00000487617 BLKP51451 505 aa20.49■□□□□ 0.87
HDAC4-209ENST00000487617 HADHBP55084 474 aaKnown RBP20.49■□□□□ 0.87
HDAC4-209ENST00000487617 CLDN6P56747 220 aa20.49■□□□□ 0.87
HDAC4-209ENST00000487617 C1orf61Q13536 156 aa20.49■□□□□ 0.87
HDAC4-209ENST00000487617 CNGA3Q16281 694 aa20.49■□□□□ 0.87
HDAC4-209ENST00000487617 DEFB133Q30KQ1 61 aa20.49■□□□□ 0.87
HDAC4-209ENST00000487617 DENND2CQ68D51 928 aa20.49■□□□□ 0.87
HDAC4-209ENST00000487617 ALG1LQ6GMV1 187 aa20.49■□□□□ 0.87
HDAC4-209ENST00000487617 USP45Q70EL2 814 aa20.49■□□□□ 0.87
HDAC4-209ENST00000487617 HID1Q8IV36 788 aa20.49■□□□□ 0.87
HDAC4-209ENST00000487617 FAM181AQ8N9Y4 354 aa20.49■□□□□ 0.87
HDAC4-209ENST00000487617 ATL2Q8NHH9 583 aa20.49■□□□□ 0.87
HDAC4-209ENST00000487617 PIH1D2Q8WWB5 315 aa20.49■□□□□ 0.87
HDAC4-209ENST00000487617 TSACCQ96A04 125 aaPredicted RBP20.49■□□□□ 0.87
HDAC4-209ENST00000487617 SCRN2Q96FV2 425 aa20.49■□□□□ 0.87
HDAC4-209ENST00000487617 LGMNQ99538 433 aa20.49■□□□□ 0.87
HDAC4-209ENST00000487617 IL12RB2Q99665 862 aa20.49■□□□□ 0.87
HDAC4-209ENST00000487617 LRRC61Q9BV99 259 aa20.49■□□□□ 0.87
HDAC4-209ENST00000487617 EVA1BQ9NVM1 165 aa20.49■□□□□ 0.87
HDAC4-209ENST00000487617 ZMIZ1Q9ULJ6 1067 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms