RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 PCDH19Q8TAB3 1148 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 FNIP1Q8TF40 1166 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 KCNE4Q8WWG9 221 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 SCG3Q8WXD2 468 aaKnown RBP12.27□□□□□ -0.45
VPS16-208ENST00000487461 ECHDC3Q96DC8 303 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 WDR92Q96MX6 357 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 CINPQ9BW66 212 aaPredicted RBP12.27□□□□□ -0.45
VPS16-208ENST00000487461 ATP13A3Q9H7F0 1226 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 SP110Q9HB58 689 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 CPNE5Q9HCH3 593 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 THSD1Q9NS62 852 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 TMEM63CQ9P1W3 806 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 KLQ9UEF7 1012 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 CNOT8Q9UFF9 292 aaKnown RBP12.27□□□□□ -0.45
VPS16-208ENST00000487461 GPR34Q9UPC5 381 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 PCDHGA8Q9Y5G5 932 aa12.27□□□□□ -0.45
VPS16-208ENST00000487461 COL27A1Q8IZC6 1860 aaPredicted RBP12.26□□□□□ -0.45
VPS16-208ENST00000487461 TTC24A2A3L6 582 aaPredicted RBP12.26□□□□□ -0.45
VPS16-208ENST00000487461 TMEM202A6NGA9 273 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 A8MX80 341 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 GOLGA6L22H0YM25 854 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 PRPSAP2O60256 369 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 LRCH4O75427 683 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 TNFP01375 233 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 SKILP12757 684 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 IL1R2P27930 398 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 PRKCIP41743 596 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 SCNN1BP51168 640 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 CCL7P80098 99 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 SKOR1P84550 965 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 IL10RBQ08334 325 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 SLC10A7Q0GE19 358 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 C19orf57Q0VDD7 668 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 DPYSQ14117 519 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 RFTN1Q14699 578 aaPredicted RBP12.26□□□□□ -0.45
VPS16-208ENST00000487461 LBRQ14739 615 aaKnown RBP12.26□□□□□ -0.45
VPS16-208ENST00000487461 ARHGAP40Q5TG30 622 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 BROXQ5VW32 411 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 FOXR1Q6PIV2 292 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 GKN2Q86XP6 184 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 PSTKQ8IV42 348 aaKnown RBP12.26□□□□□ -0.45
VPS16-208ENST00000487461 PELI3Q8N2H9 469 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 SDR16C5Q8N3Y7 309 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 ARL10Q8N8L6 244 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 WDR48Q8TAF3 677 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 COL26A1Q96A83 441 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 FUBP1Q96AE4 644 aaKnown RBP12.26□□□□□ -0.45
VPS16-208ENST00000487461 CCDC74AQ96AQ1 378 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 BPIFA3Q9BQP9 254 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 DPH1Q9BZG8 443 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 NAT10Q9H0A0 1025 aaKnown RBP12.26□□□□□ -0.45
VPS16-208ENST00000487461 MRPL40Q9NQ50 206 aaKnown RBP12.26□□□□□ -0.45
VPS16-208ENST00000487461 SSUH2Q9Y2M2 353 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 LRRK1Q38SD2 2015 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 KIF26BQ2KJY2 2108 aa12.26□□□□□ -0.45
VPS16-208ENST00000487461 A0A1W2PQC6 194 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 A0A1W2PQM1 296 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 SMTNL1A8MU46 457 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 CDRT15L2A8MXV6 281 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 TNFSF15O95150 251 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 MBD3O95983 291 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 TCF4P15884 667 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 AMPD1P23109 780 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 TRIM23P36406 574 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 TMPRSS3P57727 454 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 POLR2LP62875 67 aaKnown RBP12.25□□□□□ -0.45
VPS16-208ENST00000487461 KLHL30Q0D2K2 578 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 SPIDRQ14159 915 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 FILIP1LQ4L180 1135 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 OGFOD3Q6PK18 319 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 DPPA4Q7L190 304 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 B3GNT8Q7Z7M8 397 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 SFTPA2Q8IWL1 248 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 GPR156Q8NFN8 814 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 OR56A4Q8NGH8 313 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 ATL2Q8NHH9 583 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 WDR36Q8NI36 951 aaKnown RBP12.25□□□□□ -0.45
VPS16-208ENST00000487461 OR1E3Q8WZA6 343 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 ZNF653Q96CK0 615 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 PDXPQ96GD0 296 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 PSKH2Q96QS6 385 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 RBM15Q96T37 977 aaKnown RBP eCLIP12.25□□□□□ -0.45
VPS16-208ENST00000487461 LGR4Q9BXB1 951 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 SYNDIG1Q9H7V2 258 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 ETNK2Q9NVF9 386 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 MYO1AQ9UBC5 1043 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 SEPT3Q9UH03 358 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 DGKBQ9Y6T7 804 aa12.25□□□□□ -0.45
VPS16-208ENST00000487461 CCDC187A0A096LP49 1063 aa12.24□□□□□ -0.45
VPS16-208ENST00000487461 A0A1B0GTH6 734 aa12.24□□□□□ -0.45
VPS16-208ENST00000487461 CACNB4O00305 520 aaPredicted RBP12.24□□□□□ -0.45
VPS16-208ENST00000487461 PEX11BO96011 259 aa12.24□□□□□ -0.45
VPS16-208ENST00000487461 HOXC4P09017 264 aaPredicted RBP12.24□□□□□ -0.45
VPS16-208ENST00000487461 ELFN1P0C7U0 828 aa12.24□□□□□ -0.45
VPS16-208ENST00000487461 PCK1P35558 622 aa12.24□□□□□ -0.45
VPS16-208ENST00000487461 RENBPP51606 427 aa12.24□□□□□ -0.45
VPS16-208ENST00000487461 ZNF135P52742 658 aaPredicted RBP12.24□□□□□ -0.45
VPS16-208ENST00000487461 UCNP55089 124 aa12.24□□□□□ -0.45
VPS16-208ENST00000487461 KIAA1024LP59773 190 aa12.24□□□□□ -0.45
VPS16-208ENST00000487461 AP1S1P61966 158 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms