RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 EXOC2Q96KP1 924 aa14.28□□□□□ -0.12
CUX1-209ENST00000487284 MAGEB18Q96M61 343 aa14.28□□□□□ -0.12
CUX1-209ENST00000487284 AGAP2Q99490 1192 aa14.28□□□□□ -0.12
CUX1-209ENST00000487284 SCUBE2Q9NQ36 999 aa14.28□□□□□ -0.12
CUX1-209ENST00000487284 ARIH1Q9Y4X5 557 aaPredicted RBP14.28□□□□□ -0.12
CUX1-209ENST00000487284 CCDC78A2IDD5 438 aa14.27□□□□□ -0.12
CUX1-209ENST00000487284 MROH6A6NGR9 719 aa14.27□□□□□ -0.12
CUX1-209ENST00000487284 NDUFAB1O14561 156 aa14.27□□□□□ -0.12
CUX1-209ENST00000487284 MT-CO1P00395 513 aa14.27□□□□□ -0.12
CUX1-209ENST00000487284 ALADP13716 330 aa14.27□□□□□ -0.12
CUX1-209ENST00000487284 DRD4P21917 467 aa14.27□□□□□ -0.12
CUX1-209ENST00000487284 CTSOP43234 321 aaPredicted RBP14.27□□□□□ -0.12
CUX1-209ENST00000487284 SCNN1BP51168 640 aa14.27□□□□□ -0.12
CUX1-209ENST00000487284 TDGQ13569 410 aa14.27□□□□□ -0.12
CUX1-209ENST00000487284 SMAD1Q15797 465 aaKnown RBP14.27□□□□□ -0.12
CUX1-209ENST00000487284 IER5LQ5T953 404 aa14.27□□□□□ -0.12
CUX1-209ENST00000487284 MBLAC2Q68D91 279 aa14.27□□□□□ -0.12
CUX1-209ENST00000487284 RETSATQ6NUM9 610 aa14.27□□□□□ -0.12
CUX1-209ENST00000487284 NLRP9Q7RTR0 991 aa14.27□□□□□ -0.12
CUX1-209ENST00000487284 STRA8Q7Z7C7 330 aa14.27□□□□□ -0.12
CUX1-209ENST00000487284 GDAP1Q8TB36 358 aa14.27□□□□□ -0.12
CUX1-209ENST00000487284 TCP10LQ8TDR4 215 aa14.27□□□□□ -0.12
CUX1-209ENST00000487284 ZNF473Q8WTR7 871 aaKnown RBP14.27□□□□□ -0.12
CUX1-209ENST00000487284 PEX13Q92968 403 aa14.27□□□□□ -0.12
CUX1-209ENST00000487284 ISL2Q96A47 359 aa14.27□□□□□ -0.12
CUX1-209ENST00000487284 TDRD1Q9BXT4 1180 aaKnown RBP14.27□□□□□ -0.12
CUX1-209ENST00000487284 RABEP2Q9H5N1 569 aa14.27□□□□□ -0.12
CUX1-209ENST00000487284 TRPV5Q9NQA5 729 aa14.27□□□□□ -0.12
CUX1-209ENST00000487284 HEBP1Q9NRV9 189 aa14.27□□□□□ -0.12
CUX1-209ENST00000487284 SLC2A6Q9UGQ3 507 aa14.27□□□□□ -0.12
CUX1-209ENST00000487284 LDB2O43679 373 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 VAPBO95292 243 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 ALDOAP04075 364 aaKnown RBP14.26□□□□□ -0.13
CUX1-209ENST00000487284 DHRS4L1P0CG22 281 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 SPRP35270 261 aaPredicted RBP14.26□□□□□ -0.13
CUX1-209ENST00000487284 EIF2DP41214 584 aaKnown RBP14.26□□□□□ -0.13
CUX1-209ENST00000487284 MAGEA12P43365 314 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 STK19P49842 368 aaPredicted RBP14.26□□□□□ -0.13
CUX1-209ENST00000487284 RHOAP61586 193 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 ACVR1Q04771 509 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 LAMB3Q13751 1172 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 DMC1Q14565 340 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 CNGA3Q16281 694 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 NCEH1Q6PIU2 408 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 LVRNQ6Q4G3 990 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 RGS9BPQ6ZS82 235 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 TAX1BP1Q86VP1 789 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 SFTPA1Q8IWL2 248 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 TERB1Q8NA31 727 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 WFIKKN2Q8TEU8 576 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 DNASE1L2Q92874 299 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 RPL10LQ96L21 214 aaKnown RBP14.26□□□□□ -0.13
CUX1-209ENST00000487284 IARS2Q9NSE4 1012 aaKnown RBP14.26□□□□□ -0.13
CUX1-209ENST00000487284 PRRT4C9JH25 899 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 SPECC1L-ADORA2AF8WAN1 911 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 COPEO14579 308 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 TIMM44O43615 452 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 PRLP01236 227 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 SRFP11831 508 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 POLR2EP19388 210 aaKnown RBP14.26□□□□□ -0.13
CUX1-209ENST00000487284 CTHP32929 405 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 ETV4P43268 484 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 GALNT3Q14435 633 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 ZSCAN26Q16670 478 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 HHATQ5VTY9 493 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 TXNDC11Q6PKC3 985 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 METTL3Q86U44 580 aaKnown RBP14.26□□□□□ -0.13
CUX1-209ENST00000487284 SORCS1Q8WY21 1168 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 SRPK1Q96SB4 655 aaKnown RBP14.26□□□□□ -0.13
CUX1-209ENST00000487284 FAM167BQ9BTA0 163 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 CIPCQ9C0C6 399 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 FBRSL1Q9HCM7 1045 aaKnown RBP14.26□□□□□ -0.13
CUX1-209ENST00000487284 SLC17A7Q9P2U7 560 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 GGT7Q9UJ14 662 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 RIMKLBQ9ULI2 386 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 GRID1Q9ULK0 1009 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 PIAS3Q9Y6X2 628 aa14.26□□□□□ -0.13
CUX1-209ENST00000487284 VCANP13611 3396 aa14.25□□□□□ -0.13
CUX1-209ENST00000487284 ERICH4A6NGS2 130 aa14.25□□□□□ -0.13
CUX1-209ENST00000487284 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.25□□□□□ -0.13
CUX1-209ENST00000487284 GOLGA8TH3BQL2 631 aa14.25□□□□□ -0.13
CUX1-209ENST00000487284 K7ERQ8 282 aa14.25□□□□□ -0.13
CUX1-209ENST00000487284 TPP1O14773 563 aa14.25□□□□□ -0.13
CUX1-209ENST00000487284 SLC7A4O43246 635 aa14.25□□□□□ -0.13
CUX1-209ENST00000487284 SMAD6O43541 496 aaKnown RBP14.25□□□□□ -0.13
CUX1-209ENST00000487284 KAT7O95251 611 aa14.25□□□□□ -0.13
CUX1-209ENST00000487284 FOXN2P32314 431 aa14.25□□□□□ -0.13
CUX1-209ENST00000487284 CRHR1P34998 444 aa14.25□□□□□ -0.13
CUX1-209ENST00000487284 AP1S1P61966 158 aa14.25□□□□□ -0.13
CUX1-209ENST00000487284 SULT2A1Q06520 285 aa14.25□□□□□ -0.13
CUX1-209ENST00000487284 SLC20A2Q08357 652 aa14.25□□□□□ -0.13
CUX1-209ENST00000487284 PDK4Q16654 411 aa14.25□□□□□ -0.13
CUX1-209ENST00000487284 UGP2Q16851 508 aa14.25□□□□□ -0.13
CUX1-209ENST00000487284 CDHR3Q6ZTQ4 885 aa14.25□□□□□ -0.13
CUX1-209ENST00000487284 RNF135Q8IUD6 432 aa14.25□□□□□ -0.13
CUX1-209ENST00000487284 LRRC34Q8IZ02 419 aa14.25□□□□□ -0.13
CUX1-209ENST00000487284 OR13J1Q8NGT2 312 aa14.25□□□□□ -0.13
CUX1-209ENST00000487284 BRSK1Q8TDC3 778 aa14.25□□□□□ -0.13
CUX1-209ENST00000487284 CYB5D2Q8WUJ1 264 aa14.25□□□□□ -0.13
CUX1-209ENST00000487284 VPS39Q96JC1 886 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms