RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 FSD1LQ9BXM9 530 aa14.71□□□□□ -0.05
LIMS3-205ENST00000487150 TLR10Q9BXR5 811 aa14.71□□□□□ -0.05
LIMS3-205ENST00000487150 SMOC1Q9H4F8 434 aa14.71□□□□□ -0.05
LIMS3-205ENST00000487150 ANKRD6Q9Y2G4 727 aa14.71□□□□□ -0.05
LIMS3-205ENST00000487150 AAR2Q9Y312 384 aaKnown RBP14.71□□□□□ -0.05
LIMS3-205ENST00000487150 PTPRZ1P23471 2315 aaPredicted RBP14.71□□□□□ -0.05
LIMS3-205ENST00000487150 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.7□□□□□ -0.06
LIMS3-205ENST00000487150 TLR4O00206 839 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 GJB3O75712 270 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 EPOP01588 193 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 ZNF883P0CG24 379 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 RBL1P28749 1068 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 STIP1P31948 543 aaKnown RBP14.7□□□□□ -0.06
LIMS3-205ENST00000487150 ARRB1P49407 418 aaPredicted RBP14.7□□□□□ -0.06
LIMS3-205ENST00000487150 CSNK1EP49674 416 aaKnown RBP14.7□□□□□ -0.06
LIMS3-205ENST00000487150 LIG3P49916 1009 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 GEMP55040 296 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 NIPAL4Q0D2K0 466 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 MPP3Q13368 585 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 LRRC14Q15048 493 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 LRRC73Q5JTD7 316 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 ZNF569Q5MCW4 686 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 AADACL2Q6P093 401 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 ABI3BPQ7Z7G0 1075 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 ZSWIM9Q86XI8 627 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 REXO1L1PQ8IX06 675 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 ABCA7Q8IZY2 2146 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 ZNF567Q8N184 647 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 MINDY1Q8N5J2 469 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.7□□□□□ -0.06
LIMS3-205ENST00000487150 LPCAT1Q8NF37 534 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 ATL2Q8NHH9 583 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 SLC35B2Q8TB61 432 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 TADA1Q96BN2 335 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 KLHDC7BQ96G42 594 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 LYSMD1Q96S90 227 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 RBM15Q96T37 977 aaKnown RBP eCLIP14.7□□□□□ -0.06
LIMS3-205ENST00000487150 CEP41Q9BYV8 373 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 ERVMER34-1Q9H9K5 563 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 DNAAF2Q9NVR5 837 aaKnown RBP14.7□□□□□ -0.06
LIMS3-205ENST00000487150 TRMT1Q9NXH9 659 aaKnown RBP14.7□□□□□ -0.06
LIMS3-205ENST00000487150 B4GALT6Q9UBX8 382 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 THADAQ6YHU6 1953 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 DMDP11532 3685 aa14.7□□□□□ -0.06
LIMS3-205ENST00000487150 A0A0J9YYE9 177 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 A0A1B0GVT2 93 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 A0A1W2PR77 199 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 C5orf60A6NFR6 353 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 CES2O00748 559 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 MMP20O60882 483 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 HEXIM1O94992 359 aaKnown RBP14.69□□□□□ -0.06
LIMS3-205ENST00000487150 NDST3O95803 873 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 PAK4O96013 591 aaPredicted RBP14.69□□□□□ -0.06
LIMS3-205ENST00000487150 TRBC1P01850 177 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 PYGLP06737 847 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 NFKB1P19838 968 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 CTSKP43235 329 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 CCT8P50990 548 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 YPEL5P62699 121 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 CDK18Q07002 472 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 PTK2BQ14289 1009 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 STPG1Q5TH74 334 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 LIPIQ6XZB0 460 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 ARHGEF18Q6ZSZ5 1173 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 PTAR1Q7Z6K3 402 aaPredicted RBP14.69□□□□□ -0.06
LIMS3-205ENST00000487150 CCHCR1Q8TD31 782 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 LRRN4Q8WUT4 740 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 PIH1D2Q8WWB5 315 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 RMDN1Q96DB5 314 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 HERPUD2Q9BSE4 406 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 RTKNQ9BST9 563 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 MLPHQ9BV36 600 aaPredicted RBP14.69□□□□□ -0.06
LIMS3-205ENST00000487150 EBF2Q9HAK2 575 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 GGT7Q9UJ14 662 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 CHKBQ9Y259 395 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 USP34Q70CQ2 3546 aa14.69□□□□□ -0.06
LIMS3-205ENST00000487150 NUP205Q92621 2012 aa14.68□□□□□ -0.06
LIMS3-205ENST00000487150 TTC24A2A3L6 582 aaPredicted RBP14.68□□□□□ -0.06
LIMS3-205ENST00000487150 SLC30A4O14863 429 aa14.68□□□□□ -0.06
LIMS3-205ENST00000487150 LIASO43766 372 aa14.68□□□□□ -0.06
LIMS3-205ENST00000487150 CEP104O60308 925 aa14.68□□□□□ -0.06
LIMS3-205ENST00000487150 FGGP02679 453 aa14.68□□□□□ -0.06
LIMS3-205ENST00000487150 MMP2P08253 660 aa14.68□□□□□ -0.06
LIMS3-205ENST00000487150 THEGLP0DJG4 465 aa14.68□□□□□ -0.06
LIMS3-205ENST00000487150 TCP1P17987 556 aaKnown RBP14.68□□□□□ -0.06
LIMS3-205ENST00000487150 HLA-DPA1P20036 260 aa14.68□□□□□ -0.06
LIMS3-205ENST00000487150 NXPH1P58417 271 aa14.68□□□□□ -0.06
LIMS3-205ENST00000487150 RALGDSQ12967 914 aa14.68□□□□□ -0.06
LIMS3-205ENST00000487150 MTM1Q13496 603 aa14.68□□□□□ -0.06
LIMS3-205ENST00000487150 SUZ12Q15022 739 aaKnown RBP14.68□□□□□ -0.06
LIMS3-205ENST00000487150 ACOX1Q15067 660 aa14.68□□□□□ -0.06
LIMS3-205ENST00000487150 KIF19Q2TAC6 998 aa14.68□□□□□ -0.06
LIMS3-205ENST00000487150 DRICH1Q6PGQ1 229 aaPredicted RBP14.68□□□□□ -0.06
LIMS3-205ENST00000487150 C4orf22Q6V702 233 aa14.68□□□□□ -0.06
LIMS3-205ENST00000487150 KLK6Q92876 244 aa14.68□□□□□ -0.06
LIMS3-205ENST00000487150 RTP4Q96DX8 246 aa14.68□□□□□ -0.06
LIMS3-205ENST00000487150 CDH19Q9H159 772 aa14.68□□□□□ -0.06
LIMS3-205ENST00000487150 TRABDQ9H4I3 376 aa14.68□□□□□ -0.06
LIMS3-205ENST00000487150 GAREM1Q9H706 876 aa14.68□□□□□ -0.06
LIMS3-205ENST00000487150 RAD18Q9NS91 495 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms