RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 FSTL5Q8N475 847 aaPredicted RBP24.68■■□□□ 1.54
LIME1-206ENST00000487026 LZTR1Q8N653 840 aa24.68■■□□□ 1.54
LIME1-206ENST00000487026 CPLX3Q8WVH0 158 aa24.68■■□□□ 1.54
LIME1-206ENST00000487026 ATXN7L3BQ96GX2 97 aa24.68■■□□□ 1.54
LIME1-206ENST00000487026 PSKH2Q96QS6 385 aa24.68■■□□□ 1.54
LIME1-206ENST00000487026 PRORYQ9H606 182 aa24.68■■□□□ 1.54
LIME1-206ENST00000487026 POLR1BQ9H9Y6 1135 aa24.68■■□□□ 1.54
LIME1-206ENST00000487026 KLQ9UEF7 1012 aa24.68■■□□□ 1.54
LIME1-206ENST00000487026 SEPT3Q9UH03 358 aa24.68■■□□□ 1.54
LIME1-206ENST00000487026 BAHCC1Q9P281 2608 aa24.67■■□□□ 1.54
LIME1-206ENST00000487026 ANKRD36A6QL64 1941 aa24.67■■□□□ 1.54
LIME1-206ENST00000487026 A0A1W2PNU3 283 aaPredicted RBP24.67■■□□□ 1.54
LIME1-206ENST00000487026 SYCE3A1L190 88 aa24.67■■□□□ 1.54
LIME1-206ENST00000487026 RASGRP1O95267 797 aa24.67■■□□□ 1.54
LIME1-206ENST00000487026 ELFN1P0C7U0 828 aa24.67■■□□□ 1.54
LIME1-206ENST00000487026 RARAP10276 462 aa24.67■■□□□ 1.54
LIME1-206ENST00000487026 ARL4AP40617 200 aa24.67■■□□□ 1.54
LIME1-206ENST00000487026 ELOCQ15369 112 aa24.67■■□□□ 1.54
LIME1-206ENST00000487026 DPYSL2Q16555 572 aa24.67■■□□□ 1.54
LIME1-206ENST00000487026 BOLA3Q53S33 107 aa24.67■■□□□ 1.54
LIME1-206ENST00000487026 FIGNQ5HY92 759 aa24.67■■□□□ 1.54
LIME1-206ENST00000487026 TMCO4Q5TGY1 634 aa24.67■■□□□ 1.54
LIME1-206ENST00000487026 ESRP1Q6NXG1 681 aaKnown RBP24.67■■□□□ 1.54
LIME1-206ENST00000487026 TPCN2Q8NHX9 752 aa24.67■■□□□ 1.54
LIME1-206ENST00000487026 PCDH19Q8TAB3 1148 aa24.67■■□□□ 1.54
LIME1-206ENST00000487026 CCDC3Q9BQI4 270 aa24.67■■□□□ 1.54
LIME1-206ENST00000487026 THAP2Q9H0W7 228 aa24.67■■□□□ 1.54
LIME1-206ENST00000487026 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.67■■□□□ 1.54
LIME1-206ENST00000487026 SATB2Q9UPW6 733 aa24.67■■□□□ 1.54
LIME1-206ENST00000487026 PCDHGC4Q9Y5F7 938 aa24.67■■□□□ 1.54
LIME1-206ENST00000487026 FASNP49327 2511 aaKnown RBP24.66■■□□□ 1.54
LIME1-206ENST00000487026 GM2AP17900 193 aa24.66■■□□□ 1.54
LIME1-206ENST00000487026 RENBPP51606 427 aa24.66■■□□□ 1.54
LIME1-206ENST00000487026 AP1S1P61966 158 aa24.66■■□□□ 1.54
LIME1-206ENST00000487026 POLR2LP62875 67 aaKnown RBP24.66■■□□□ 1.54
LIME1-206ENST00000487026 MTM1Q13496 603 aa24.66■■□□□ 1.54
LIME1-206ENST00000487026 ACAP1Q15027 740 aa24.66■■□□□ 1.54
LIME1-206ENST00000487026 C3orf38Q5JPI3 329 aa24.66■■□□□ 1.54
LIME1-206ENST00000487026 TMCO3Q6UWJ1 677 aa24.66■■□□□ 1.54
LIME1-206ENST00000487026 RBM44Q6ZP01 1051 aaKnown RBP24.66■■□□□ 1.54
LIME1-206ENST00000487026 DPPA4Q7L190 304 aa24.66■■□□□ 1.54
LIME1-206ENST00000487026 SPACA3Q8IXA5 215 aa24.66■■□□□ 1.54
LIME1-206ENST00000487026 KYQ8NBH2 561 aa24.66■■□□□ 1.54
LIME1-206ENST00000487026 SCG3Q8WXD2 468 aaKnown RBP24.66■■□□□ 1.54
LIME1-206ENST00000487026 FUBP1Q96AE4 644 aaKnown RBP24.66■■□□□ 1.54
LIME1-206ENST00000487026 WDR92Q96MX6 357 aa24.66■■□□□ 1.54
LIME1-206ENST00000487026 ZNF578Q96N58 590 aaPredicted RBP24.66■■□□□ 1.54
LIME1-206ENST00000487026 CSPG4P5Q96PW8 444 aa24.66■■□□□ 1.54
LIME1-206ENST00000487026 SYNDIG1Q9H7V2 258 aa24.66■■□□□ 1.54
LIME1-206ENST00000487026 GPR34Q9UPC5 381 aa24.66■■□□□ 1.54
LIME1-206ENST00000487026 ENTPD2Q9Y5L3 495 aa24.66■■□□□ 1.54
LIME1-206ENST00000487026 CFAP69A5D8W1 941 aa24.65■■□□□ 1.54
LIME1-206ENST00000487026 TMEM202A6NGA9 273 aa24.65■■□□□ 1.54
LIME1-206ENST00000487026 PEX11BO96011 259 aa24.65■■□□□ 1.54
LIME1-206ENST00000487026 TNFP01375 233 aa24.65■■□□□ 1.54
LIME1-206ENST00000487026 ALPIP09923 528 aa24.65■■□□□ 1.54
LIME1-206ENST00000487026 PBX1P40424 430 aa24.65■■□□□ 1.54
LIME1-206ENST00000487026 TLE3Q04726 772 aa24.65■■□□□ 1.54
LIME1-206ENST00000487026 ZNF235Q14590 738 aa24.65■■□□□ 1.54
LIME1-206ENST00000487026 ACOX1Q15067 660 aa24.65■■□□□ 1.54
LIME1-206ENST00000487026 COL27A1Q8IZC6 1860 aaPredicted RBP24.65■■□□□ 1.54
LIME1-206ENST00000487026 LSMEM2Q8N112 164 aa24.65■■□□□ 1.54
LIME1-206ENST00000487026 PELI3Q8N2H9 469 aa24.65■■□□□ 1.54
LIME1-206ENST00000487026 PGBD5Q8N414 524 aa24.65■■□□□ 1.54
LIME1-206ENST00000487026 PDCD6IPQ8WUM4 868 aaKnown RBP24.65■■□□□ 1.54
LIME1-206ENST00000487026 OR1E3Q8WZA6 343 aa24.65■■□□□ 1.54
LIME1-206ENST00000487026 NAT6Q93015 286 aa24.65■■□□□ 1.54
LIME1-206ENST00000487026 PDXPQ96GD0 296 aa24.65■■□□□ 1.54
LIME1-206ENST00000487026 ZNF599Q96NL3 588 aa24.65■■□□□ 1.54
LIME1-206ENST00000487026 LGMNQ99538 433 aa24.65■■□□□ 1.54
LIME1-206ENST00000487026 MRPL40Q9NQ50 206 aaKnown RBP24.65■■□□□ 1.54
LIME1-206ENST00000487026 B4GALT6Q9UBX8 382 aa24.65■■□□□ 1.54
LIME1-206ENST00000487026 RABGEF1Q9UJ41 708 aa24.65■■□□□ 1.54
LIME1-206ENST00000487026 PTPRQQ9UMZ3 2332 aa24.65■■□□□ 1.54
LIME1-206ENST00000487026 A0A1W2PQJ5 194 aa24.64■■□□□ 1.54
LIME1-206ENST00000487026 PMS2P1A4D2B8 440 aa24.64■■□□□ 1.54
LIME1-206ENST00000487026 MAFKO60675 156 aa24.64■■□□□ 1.54
LIME1-206ENST00000487026 UBASH3AP57075 661 aa24.64■■□□□ 1.54
LIME1-206ENST00000487026 PCBP4P57723 403 aaKnown RBP24.64■■□□□ 1.54
LIME1-206ENST00000487026 PIGHQ14442 188 aaPredicted RBP24.64■■□□□ 1.54
LIME1-206ENST00000487026 NFKBIBQ15653 356 aa24.64■■□□□ 1.54
LIME1-206ENST00000487026 FOXR1Q6PIV2 292 aa24.64■■□□□ 1.54
LIME1-206ENST00000487026 GKN2Q86XP6 184 aa24.64■■□□□ 1.54
LIME1-206ENST00000487026 ARL10Q8N8L6 244 aa24.64■■□□□ 1.54
LIME1-206ENST00000487026 ZNF248Q8NDW4 579 aa24.64■■□□□ 1.54
LIME1-206ENST00000487026 HIC2Q96JB3 615 aa24.64■■□□□ 1.54
LIME1-206ENST00000487026 FCRL3Q96P31 734 aaPredicted RBP24.64■■□□□ 1.54
LIME1-206ENST00000487026 NUP85Q9BW27 656 aa24.64■■□□□ 1.54
LIME1-206ENST00000487026 PCDH18Q9HCL0 1135 aa24.64■■□□□ 1.54
LIME1-206ENST00000487026 ANAPC7Q9UJX3 599 aa24.64■■□□□ 1.54
LIME1-206ENST00000487026 BZW2Q9Y6E2 419 aaKnown RBP24.64■■□□□ 1.54
LIME1-206ENST00000487026 A0A087X0T9 212 aa24.63■■□□□ 1.53
LIME1-206ENST00000487026 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP24.63■■□□□ 1.53
LIME1-206ENST00000487026 CACNB4O00305 520 aaPredicted RBP24.63■■□□□ 1.53
LIME1-206ENST00000487026 DXOO77932 396 aaKnown RBP24.63■■□□□ 1.53
LIME1-206ENST00000487026 SERPING1P05155 500 aa24.63■■□□□ 1.53
LIME1-206ENST00000487026 FAM228BP0C875 321 aa24.63■■□□□ 1.53
LIME1-206ENST00000487026 TPM4P67936 248 aa24.63■■□□□ 1.53
LIME1-206ENST00000487026 LVRNQ6Q4G3 990 aa24.63■■□□□ 1.53
LIME1-206ENST00000487026 ATL2Q8NHH9 583 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms