RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 CFAP99D6REC4 459 aa13.29□□□□□ -0.28
HMGN1-216ENST00000486741 MGRN1O60291 552 aa13.29□□□□□ -0.28
HMGN1-216ENST00000486741 ACSL4O60488 711 aa13.29□□□□□ -0.28
HMGN1-216ENST00000486741 ME2P23368 584 aa13.29□□□□□ -0.28
HMGN1-216ENST00000486741 PPP3CCP48454 512 aa13.29□□□□□ -0.28
HMGN1-216ENST00000486741 SLC18A2Q05940 514 aa13.29□□□□□ -0.28
HMGN1-216ENST00000486741 ITIH5Q86UX2 942 aa13.29□□□□□ -0.28
HMGN1-216ENST00000486741 HAPLN3Q96S86 360 aa13.29□□□□□ -0.28
HMGN1-216ENST00000486741 CAAP1Q9H8G2 361 aa13.29□□□□□ -0.28
HMGN1-216ENST00000486741 EIF2B3Q9NR50 452 aaKnown RBP13.29□□□□□ -0.28
HMGN1-216ENST00000486741 ARHGEF3Q9NR81 526 aa13.29□□□□□ -0.28
HMGN1-216ENST00000486741 VPS45Q9NRW7 570 aa13.29□□□□□ -0.28
HMGN1-216ENST00000486741 EVLQ9UI08 416 aaPredicted RBP13.29□□□□□ -0.28
HMGN1-216ENST00000486741 TMEM233B4DJY2 109 aa13.29□□□□□ -0.28
HMGN1-216ENST00000486741 ALDOAP04075 364 aaKnown RBP13.29□□□□□ -0.28
HMGN1-216ENST00000486741 ACRP10323 421 aa13.29□□□□□ -0.28
HMGN1-216ENST00000486741 ACADSP16219 412 aa13.29□□□□□ -0.28
HMGN1-216ENST00000486741 PIK3CGP48736 1102 aa13.29□□□□□ -0.28
HMGN1-216ENST00000486741 SLC11A1P49279 550 aa13.29□□□□□ -0.28
HMGN1-216ENST00000486741 HTRA3P83110 453 aa13.29□□□□□ -0.28
HMGN1-216ENST00000486741 TTLL9Q3SXZ7 439 aa13.29□□□□□ -0.28
HMGN1-216ENST00000486741 RBM20Q5T481 1227 aaKnown RBP13.29□□□□□ -0.28
HMGN1-216ENST00000486741 GK5Q6ZS86 529 aa13.29□□□□□ -0.28
HMGN1-216ENST00000486741 ZMIZ2Q8NF64 920 aa13.29□□□□□ -0.28
HMGN1-216ENST00000486741 BHLHE22Q8NFJ8 381 aaPredicted RBP13.29□□□□□ -0.28
HMGN1-216ENST00000486741 STAG3L4Q8TBR4 150 aa13.29□□□□□ -0.28
HMGN1-216ENST00000486741 C2orf49Q9BVC5 232 aaPredicted RBP13.29□□□□□ -0.28
HMGN1-216ENST00000486741 FCF1Q9Y324 198 aaKnown RBP13.29□□□□□ -0.28
HMGN1-216ENST00000486741 SAC3D1A6NKF1 404 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 FKBP6O75344 327 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 TGDSO95455 350 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 ZNF7P17097 686 aaPredicted RBP13.28□□□□□ -0.28
HMGN1-216ENST00000486741 LPOP22079 712 aaPredicted RBP13.28□□□□□ -0.28
HMGN1-216ENST00000486741 IDH3AP50213 366 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 GALNT2Q10471 571 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 INSCQ1MX18 579 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 TSTD2Q5T7W7 516 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 NPAS4Q8IUM7 802 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 FAM156AQ8NDB6 213 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 TNKS2Q9H2K2 1166 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 BATF3Q9NR55 127 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 ZNHIT2Q9UHR6 403 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 CROTQ9UKG9 612 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 PNMA8BQ9ULN7 279 aaPredicted RBP13.28□□□□□ -0.28
HMGN1-216ENST00000486741 RAI2Q9Y5P3 530 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 AK5Q9Y6K8 562 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 FGF1P05230 155 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 MRPS35P82673 323 aaKnown RBP13.28□□□□□ -0.28
HMGN1-216ENST00000486741 CCDC15Q0P6D6 951 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 ATXN7L2Q5T6C5 722 aaPredicted RBP13.28□□□□□ -0.28
HMGN1-216ENST00000486741 FAM45BPQ6NSW5 357 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 CUZD1Q86UP6 607 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 FAM45AQ8TCE6 357 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 DENND1AQ8TEH3 1009 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 MTMR10Q9NXD2 777 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 APPL1Q9UKG1 709 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 ORC6Q9Y5N6 252 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 RGSL1A5PLK6 1076 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 SLC38A8A6NNN8 435 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 PEX1O43933 1283 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 GOT2P00505 430 aaKnown RBP13.28□□□□□ -0.28
HMGN1-216ENST00000486741 NEK3P51956 506 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 CCNG1P51959 295 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 TLE2Q04725 743 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 TRIP4Q15650 581 aaPredicted RBP13.28□□□□□ -0.28
HMGN1-216ENST00000486741 SLC9B1Q4ZJI4 515 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 TTC23LQ6PF05 361 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 IL27RAQ6UWB1 636 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 NAPRTQ6XQN6 538 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 ADCK2Q7Z695 626 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 CLEC4FQ8N1N0 589 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 VPS50Q96JG6 964 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 FCRL5Q96RD9 977 aa13.28□□□□□ -0.28
HMGN1-216ENST00000486741 SYN3O14994 580 aa13.27□□□□□ -0.28
HMGN1-216ENST00000486741 DCLK1O15075 740 aa13.27□□□□□ -0.28
HMGN1-216ENST00000486741 INPP4BO15327 924 aa13.27□□□□□ -0.28
HMGN1-216ENST00000486741 HAPLN1P10915 354 aaPredicted RBP13.27□□□□□ -0.28
HMGN1-216ENST00000486741 HGFP14210 728 aa13.27□□□□□ -0.28
HMGN1-216ENST00000486741 HLA-DPA1P20036 260 aa13.27□□□□□ -0.28
HMGN1-216ENST00000486741 NRF1Q16656 503 aa13.27□□□□□ -0.28
HMGN1-216ENST00000486741 ARHGAP15Q53QZ3 475 aa13.27□□□□□ -0.28
HMGN1-216ENST00000486741 LRRC73Q5JTD7 316 aa13.27□□□□□ -0.28
HMGN1-216ENST00000486741 RNF19BQ6ZMZ0 732 aa13.27□□□□□ -0.28
HMGN1-216ENST00000486741 TMCO2Q7Z6W1 182 aaPredicted RBP13.27□□□□□ -0.28
HMGN1-216ENST00000486741 OR6Y1Q8NGX8 325 aa13.27□□□□□ -0.28
HMGN1-216ENST00000486741 DNAJB14Q8TBM8 379 aa13.27□□□□□ -0.28
HMGN1-216ENST00000486741 SPATA17Q96L03 361 aa13.27□□□□□ -0.28
HMGN1-216ENST00000486741 KLHL4Q9C0H6 718 aa13.27□□□□□ -0.28
HMGN1-216ENST00000486741 OSBPL2Q9H1P3 480 aa13.27□□□□□ -0.28
HMGN1-216ENST00000486741 SLC25A13Q9UJS0 675 aa13.27□□□□□ -0.28
HMGN1-216ENST00000486741 FAF1Q9UNN5 650 aaPredicted RBP13.27□□□□□ -0.28
HMGN1-216ENST00000486741 TRAF6Q9Y4K3 522 aa13.27□□□□□ -0.28
HMGN1-216ENST00000486741 WASF2Q9Y6W5 498 aa13.27□□□□□ -0.28
HMGN1-216ENST00000486741 KPNA3O00505 521 aaPredicted RBP13.27□□□□□ -0.28
HMGN1-216ENST00000486741 MOGSQ13724 837 aa13.27□□□□□ -0.28
HMGN1-216ENST00000486741 LSM12Q3MHD2 195 aaKnown RBP13.27□□□□□ -0.28
HMGN1-216ENST00000486741 KIAA0319Q5VV43 1072 aa13.27□□□□□ -0.28
HMGN1-216ENST00000486741 RBM23Q86U06 439 aaKnown RBP13.27□□□□□ -0.28
HMGN1-216ENST00000486741 ST13P5Q8NFI4 369 aaPredicted RBP13.27□□□□□ -0.28
HMGN1-216ENST00000486741 SLC2A13Q96QE2 648 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms