RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 A0A1W2PNU3 283 aaPredicted RBP22.54■■□□□ 1.2
SREBF1-214ENST00000486311 EIF4E1BA6NMX2 242 aaKnown RBP22.54■■□□□ 1.2
SREBF1-214ENST00000486311 TRAFD1O14545 582 aaPredicted RBP22.54■■□□□ 1.2
SREBF1-214ENST00000486311 PCCBP05166 539 aa22.54■■□□□ 1.2
SREBF1-214ENST00000486311 SKILP12757 684 aa22.54■■□□□ 1.2
SREBF1-214ENST00000486311 CTSEP14091 401 aa22.54■■□□□ 1.2
SREBF1-214ENST00000486311 RENBPP51606 427 aa22.54■■□□□ 1.2
SREBF1-214ENST00000486311 SRP54P61011 504 aaKnown RBP22.54■■□□□ 1.2
SREBF1-214ENST00000486311 AP1S1P61966 158 aa22.54■■□□□ 1.2
SREBF1-214ENST00000486311 POLR2LP62875 67 aaKnown RBP22.54■■□□□ 1.2
SREBF1-214ENST00000486311 NR1I3Q14994 352 aa22.54■■□□□ 1.2
SREBF1-214ENST00000486311 DPYSL2Q16555 572 aa22.54■■□□□ 1.2
SREBF1-214ENST00000486311 FIGNQ5HY92 759 aa22.54■■□□□ 1.2
SREBF1-214ENST00000486311 TP53INP2Q8IXH6 220 aa22.54■■□□□ 1.2
SREBF1-214ENST00000486311 PCDH19Q8TAB3 1148 aa22.54■■□□□ 1.2
SREBF1-214ENST00000486311 WDR92Q96MX6 357 aa22.54■■□□□ 1.2
SREBF1-214ENST00000486311 CCDC3Q9BQI4 270 aa22.54■■□□□ 1.2
SREBF1-214ENST00000486311 MYO1AQ9UBC5 1043 aa22.54■■□□□ 1.2
SREBF1-214ENST00000486311 KLQ9UEF7 1012 aa22.54■■□□□ 1.2
SREBF1-214ENST00000486311 SATB2Q9UPW6 733 aa22.54■■□□□ 1.2
SREBF1-214ENST00000486311 H3BRJ5 948 aa22.53■■□□□ 1.2
SREBF1-214ENST00000486311 RECQL5O94762 991 aaPredicted RBP22.53■■□□□ 1.2
SREBF1-214ENST00000486311 IL1R2P27930 398 aa22.53■■□□□ 1.2
SREBF1-214ENST00000486311 SCNN1BP51168 640 aa22.53■■□□□ 1.2
SREBF1-214ENST00000486311 LBRQ14739 615 aaKnown RBP22.53■■□□□ 1.2
SREBF1-214ENST00000486311 IQCB1Q15051 598 aa22.53■■□□□ 1.2
SREBF1-214ENST00000486311 BOLA3Q53S33 107 aa22.53■■□□□ 1.2
SREBF1-214ENST00000486311 C3orf38Q5JPI3 329 aa22.53■■□□□ 1.2
SREBF1-214ENST00000486311 TMCO4Q5TGY1 634 aa22.53■■□□□ 1.2
SREBF1-214ENST00000486311 LIPIQ6XZB0 460 aa22.53■■□□□ 1.2
SREBF1-214ENST00000486311 NYAP1Q6ZVC0 841 aa22.53■■□□□ 1.2
SREBF1-214ENST00000486311 DPPA4Q7L190 304 aa22.53■■□□□ 1.2
SREBF1-214ENST00000486311 GKN2Q86XP6 184 aa22.53■■□□□ 1.2
SREBF1-214ENST00000486311 PLA2G15Q8NCC3 412 aa22.53■■□□□ 1.2
SREBF1-214ENST00000486311 SPOCK2Q92563 424 aa22.53■■□□□ 1.2
SREBF1-214ENST00000486311 NSMCE3Q96MG7 304 aa22.53■■□□□ 1.2
SREBF1-214ENST00000486311 THSD1Q9NS62 852 aa22.53■■□□□ 1.2
SREBF1-214ENST00000486311 GULP1Q9UBP9 304 aa22.53■■□□□ 1.2
SREBF1-214ENST00000486311 PCDHGA8Q9Y5G5 932 aa22.53■■□□□ 1.2
SREBF1-214ENST00000486311 DGKBQ9Y6T7 804 aa22.53■■□□□ 1.2
SREBF1-214ENST00000486311 CASC3O15234 703 aaKnown RBP22.52■■□□□ 1.2
SREBF1-214ENST00000486311 ELFN1P0C7U0 828 aa22.52■■□□□ 1.2
SREBF1-214ENST00000486311 KIAA1024LP59773 190 aa22.52■■□□□ 1.2
SREBF1-214ENST00000486311 SLC10A7Q0GE19 358 aa22.52■■□□□ 1.2
SREBF1-214ENST00000486311 CAVIN1Q6NZI2 390 aaKnown RBP22.52■■□□□ 1.2
SREBF1-214ENST00000486311 GPR155Q7Z3F1 870 aa22.52■■□□□ 1.2
SREBF1-214ENST00000486311 RD3Q7Z3Z2 195 aa22.52■■□□□ 1.2
SREBF1-214ENST00000486311 KYQ8NBH2 561 aa22.52■■□□□ 1.2
SREBF1-214ENST00000486311 RBM15Q96T37 977 aaKnown RBP eCLIP22.52■■□□□ 1.2
SREBF1-214ENST00000486311 FUCA2Q9BTY2 467 aa22.52■■□□□ 1.2
SREBF1-214ENST00000486311 BPTFQ12830 3046 aa22.51■■□□□ 1.19
SREBF1-214ENST00000486311 CACNB4O00305 520 aaPredicted RBP22.51■■□□□ 1.19
SREBF1-214ENST00000486311 NTN3O00634 580 aaPredicted RBP22.51■■□□□ 1.19
SREBF1-214ENST00000486311 PEX11BO96011 259 aa22.51■■□□□ 1.19
SREBF1-214ENST00000486311 SERPINC1P01008 464 aa22.51■■□□□ 1.19
SREBF1-214ENST00000486311 TNFP01375 233 aa22.51■■□□□ 1.19
SREBF1-214ENST00000486311 HOXC4P09017 264 aaPredicted RBP22.51■■□□□ 1.19
SREBF1-214ENST00000486311 TCF4P15884 667 aa22.51■■□□□ 1.19
SREBF1-214ENST00000486311 GM2AP17900 193 aa22.51■■□□□ 1.19
SREBF1-214ENST00000486311 RBMS1P29558 406 aaKnown RBP22.51■■□□□ 1.19
SREBF1-214ENST00000486311 ARL4AP40617 200 aa22.51■■□□□ 1.19
SREBF1-214ENST00000486311 PDX1P52945 283 aa22.51■■□□□ 1.19
SREBF1-214ENST00000486311 TCEA2Q15560 299 aa22.51■■□□□ 1.19
SREBF1-214ENST00000486311 SMTNL2Q2TAL5 461 aa22.51■■□□□ 1.19
SREBF1-214ENST00000486311 HGSNATQ68CP4 663 aa22.51■■□□□ 1.19
SREBF1-214ENST00000486311 KCTD16Q68DU8 428 aa22.51■■□□□ 1.19
SREBF1-214ENST00000486311 POLNQ7Z5Q5 900 aa22.51■■□□□ 1.19
SREBF1-214ENST00000486311 PAF1Q8N7H5 531 aa22.51■■□□□ 1.19
SREBF1-214ENST00000486311 FUBP1Q96AE4 644 aaKnown RBP22.51■■□□□ 1.19
SREBF1-214ENST00000486311 PDXPQ96GD0 296 aa22.51■■□□□ 1.19
SREBF1-214ENST00000486311 PRR11Q96HE9 360 aaPredicted RBP22.51■■□□□ 1.19
SREBF1-214ENST00000486311 NAF1Q96HR8 494 aaKnown RBP22.51■■□□□ 1.19
SREBF1-214ENST00000486311 SLC46A1Q96NT5 459 aa22.51■■□□□ 1.19
SREBF1-214ENST00000486311 ETNK2Q9NVF9 386 aa22.51■■□□□ 1.19
SREBF1-214ENST00000486311 SIRPGQ9P1W8 387 aa22.51■■□□□ 1.19
SREBF1-214ENST00000486311 GPR34Q9UPC5 381 aa22.51■■□□□ 1.19
SREBF1-214ENST00000486311 TEX51A0A1B0GUA7 166 aa22.5■■□□□ 1.19
SREBF1-214ENST00000486311 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.5■■□□□ 1.19
SREBF1-214ENST00000486311 TK2O00142 265 aa22.5■■□□□ 1.19
SREBF1-214ENST00000486311 ATXN7O15265 892 aaPredicted RBP22.5■■□□□ 1.19
SREBF1-214ENST00000486311 HTRA2O43464 458 aaPredicted RBP22.5■■□□□ 1.19
SREBF1-214ENST00000486311 CR2P20023 1033 aa22.5■■□□□ 1.19
SREBF1-214ENST00000486311 AMPD1P23109 780 aa22.5■■□□□ 1.19
SREBF1-214ENST00000486311 TRIM23P36406 574 aa22.5■■□□□ 1.19
SREBF1-214ENST00000486311 HSPA9P38646 679 aaKnown RBP22.5■■□□□ 1.19
SREBF1-214ENST00000486311 SPIDRQ14159 915 aa22.5■■□□□ 1.19
SREBF1-214ENST00000486311 TMCO3Q6UWJ1 677 aa22.5■■□□□ 1.19
SREBF1-214ENST00000486311 LSM14AQ8ND56 463 aaKnown RBP22.5■■□□□ 1.19
SREBF1-214ENST00000486311 OR56A4Q8NGH8 313 aa22.5■■□□□ 1.19
SREBF1-214ENST00000486311 KCNE4Q8WWG9 221 aa22.5■■□□□ 1.19
SREBF1-214ENST00000486311 OR1E3Q8WZA6 343 aa22.5■■□□□ 1.19
SREBF1-214ENST00000486311 CSPG4P5Q96PW8 444 aa22.5■■□□□ 1.19
SREBF1-214ENST00000486311 FGF22Q9HCT0 170 aa22.5■■□□□ 1.19
SREBF1-214ENST00000486311 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.5■■□□□ 1.19
SREBF1-214ENST00000486311 A0A1W2PQ67 120 aa22.49■■□□□ 1.19
SREBF1-214ENST00000486311 A0A1W2PQJ5 194 aa22.49■■□□□ 1.19
SREBF1-214ENST00000486311 TMEM202A6NGA9 273 aa22.49■■□□□ 1.19
SREBF1-214ENST00000486311 TNFRSF10CO14798 259 aa22.49■■□□□ 1.19
SREBF1-214ENST00000486311 SOCS5O75159 536 aa22.49■■□□□ 1.19
SREBF1-214ENST00000486311 RARAP10276 462 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms