RNA–Protein interactions for RNA: ENST00000486268.5

ERGIC3-215, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-215ENST00000486268 ATG16L1Q676U5 607 aa11.86□□□□□ -0.51
ERGIC3-215ENST00000486268 GET4Q7L5D6 327 aaPredicted RBP11.86□□□□□ -0.51
ERGIC3-215ENST00000486268 CELF5Q8N6W0 485 aaKnown RBP11.86□□□□□ -0.51
ERGIC3-215ENST00000486268 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.86□□□□□ -0.51
ERGIC3-215ENST00000486268 OR13J1Q8NGT2 312 aa11.86□□□□□ -0.51
ERGIC3-215ENST00000486268 ZNF75CPQ92670 426 aaPredicted RBP11.86□□□□□ -0.51
ERGIC3-215ENST00000486268 IRF7Q92985 503 aa11.86□□□□□ -0.51
ERGIC3-215ENST00000486268 RMDN1Q96DB5 314 aa11.86□□□□□ -0.51
ERGIC3-215ENST00000486268 TSNARE1Q96NA8 513 aa11.86□□□□□ -0.51
ERGIC3-215ENST00000486268 NECTIN4Q96NY8 510 aa11.86□□□□□ -0.51
ERGIC3-215ENST00000486268 MYADMQ96S97 322 aa11.86□□□□□ -0.51
ERGIC3-215ENST00000486268 PITPNM3Q9BZ71 974 aa11.86□□□□□ -0.51
ERGIC3-215ENST00000486268 SLC13A1Q9BZW2 595 aa11.86□□□□□ -0.51
ERGIC3-215ENST00000486268 CEP44Q9C0F1 390 aa11.86□□□□□ -0.51
ERGIC3-215ENST00000486268 SPHK2Q9NRA0 654 aa11.86□□□□□ -0.51
ERGIC3-215ENST00000486268 SNX15Q9NRS6 342 aa11.86□□□□□ -0.51
ERGIC3-215ENST00000486268 FGFR1OP2Q9NVK5 253 aa11.86□□□□□ -0.51
ERGIC3-215ENST00000486268 NLE1Q9NVX2 485 aaPredicted RBP11.86□□□□□ -0.51
ERGIC3-215ENST00000486268 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.86□□□□□ -0.51
ERGIC3-215ENST00000486268 SLC17A7Q9P2U7 560 aa11.86□□□□□ -0.51
ERGIC3-215ENST00000486268 MRPS23Q9Y3D9 190 aaKnown RBP11.86□□□□□ -0.51
ERGIC3-215ENST00000486268 MYO10Q9HD67 2058 aa11.86□□□□□ -0.51
ERGIC3-215ENST00000486268 A0A1W2PQ67 120 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 C2orf81A6NN90 581 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 ANKRD66B4E2M5 251 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 PFDN6O15212 129 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 FZD6O60353 706 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 EDF1O60869 148 aaKnown RBP11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 SOCS5O75159 536 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 IGSF6O95976 241 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 GSRP00390 522 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 PRLP01236 227 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 AHSGP02765 367 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 COL9A1P20849 921 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 RGRP47804 291 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 GRIA4P48058 902 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 CSRP3P50461 194 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 VASPP50552 380 aaPredicted RBP11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 CLCN5P51795 746 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 KPNA2P52292 529 aaKnown RBP11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 QPCTQ16769 361 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 PUS10Q3MIT2 529 aaKnown RBP11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 TAF1BQ53T94 588 aaPredicted RBP11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 PITRM1Q5JRX3 1037 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 ZNF470Q6ECI4 717 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 MRNIPQ6NTE8 343 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 TPGS1Q6ZTW0 290 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 SDCCAG8Q86SQ7 713 aaPredicted RBP11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 NPAS3Q8IXF0 933 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 PLPP6Q8IY26 295 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 APCDD1Q8J025 514 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 WFDC5Q8TCV5 224 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 ZNF398Q8TD17 642 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 BLOC1S5Q8TDH9 187 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 SREK1Q8WXA9 508 aaKnown RBP11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 ING5Q8WYH8 240 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 TSPAN17Q96FV3 270 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 ASB2Q96Q27 587 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 TUBGCP5Q96RT8 1024 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 PHF7Q9BWX1 381 aaPredicted RBP11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 RABEP2Q9H5N1 569 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 OBP2AQ9NY56 170 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 IL1RAPL1Q9NZN1 696 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 SIRPGQ9P1W8 387 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 SLC2A6Q9UGQ3 507 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 SLC25A13Q9UJS0 675 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 TLK1Q9UKI8 766 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 FBXO5Q9UKT4 447 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 CCL26Q9Y258 94 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 HS3ST2Q9Y278 367 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 VPS9D1Q9Y2B5 631 aa11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 MTO1Q9Y2Z2 717 aaKnown RBP11.85□□□□□ -0.51
ERGIC3-215ENST00000486268 A0A087X1B8 175 aa11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 A0A096LPK6 155 aa11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 TTC24A2A3L6 582 aaPredicted RBP11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 C2CD4DB7Z1M9 353 aa11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 PLIN3O60664 434 aa11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 TGDSO95455 350 aa11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 BPGMP07738 259 aa11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 NEFHP12036 1026 aa11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 STMN1P16949 149 aa11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 LPOP22079 712 aaPredicted RBP11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 SP100P23497 879 aaPredicted RBP11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 SLC26A3P40879 764 aa11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 SLC1A2P43004 574 aa11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 PRKAA2P54646 552 aa11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 HNRNPH2P55795 449 aaKnown RBP11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 SNRPD1P62314 119 aaKnown RBP11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 GALNT3Q14435 633 aa11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 USP10Q14694 798 aaKnown RBP11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 TSNAXIP1Q2TAA8 658 aa11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 ARMC12Q5T9G4 340 aa11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 C6orf89Q6UWU4 347 aa11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 LINGO4Q6UY18 593 aa11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 CDHR3Q6ZTQ4 885 aa11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 GLT6D1Q7Z4J2 308 aa11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 SPATA21Q7Z572 469 aa11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 KIAA0907Q7Z7F0 614 aaPredicted RBP11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 CLEC14AQ86T13 490 aa11.84□□□□□ -0.51
ERGIC3-215ENST00000486268 CILP2Q8IUL8 1156 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms