RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 RFX8Q6ZV50 586 aa19.35■□□□□ 0.69
COL27A1-205ENST00000485397 SDR16C5Q8N3Y7 309 aa19.35■□□□□ 0.69
COL27A1-205ENST00000485397 ARL14Q8N4G2 192 aa19.35■□□□□ 0.69
COL27A1-205ENST00000485397 NPWQ8N729 165 aa19.35■□□□□ 0.69
COL27A1-205ENST00000485397 OR1E3Q8WZA6 343 aa19.35■□□□□ 0.69
COL27A1-205ENST00000485397 NSMCE3Q96MG7 304 aa19.35■□□□□ 0.69
COL27A1-205ENST00000485397 CINPQ9BW66 212 aaPredicted RBP19.35■□□□□ 0.69
COL27A1-205ENST00000485397 TRIM7Q9C029 511 aa19.35■□□□□ 0.69
COL27A1-205ENST00000485397 ATP13A3Q9H7F0 1226 aa19.35■□□□□ 0.69
COL27A1-205ENST00000485397 SP110Q9HB58 689 aa19.35■□□□□ 0.69
COL27A1-205ENST00000485397 PARVAQ9NVD7 372 aa19.35■□□□□ 0.69
COL27A1-205ENST00000485397 A0A1W2PQM1 296 aa19.34■□□□□ 0.69
COL27A1-205ENST00000485397 DFFAO00273 331 aa19.34■□□□□ 0.69
COL27A1-205ENST00000485397 RECQL5O94762 991 aaPredicted RBP19.34■□□□□ 0.69
COL27A1-205ENST00000485397 RPLP0P05388 317 aaKnown RBP19.34■□□□□ 0.69
COL27A1-205ENST00000485397 BCL2L1Q07817 233 aa19.34■□□□□ 0.69
COL27A1-205ENST00000485397 LIPIQ6XZB0 460 aa19.34■□□□□ 0.69
COL27A1-205ENST00000485397 CLEC14AQ86T13 490 aa19.34■□□□□ 0.69
COL27A1-205ENST00000485397 TP53INP2Q8IXH6 220 aa19.34■□□□□ 0.69
COL27A1-205ENST00000485397 AOPEPQ8N6M6 819 aa19.34■□□□□ 0.69
COL27A1-205ENST00000485397 ATL2Q8NHH9 583 aa19.34■□□□□ 0.69
COL27A1-205ENST00000485397 FUBP1Q96AE4 644 aaKnown RBP19.34■□□□□ 0.69
COL27A1-205ENST00000485397 ECHDC3Q96DC8 303 aa19.34■□□□□ 0.69
COL27A1-205ENST00000485397 GFM1Q96RP9 751 aaKnown RBP19.34■□□□□ 0.69
COL27A1-205ENST00000485397 RBM15Q96T37 977 aaKnown RBP eCLIP19.34■□□□□ 0.69
COL27A1-205ENST00000485397 FOXP3Q9BZS1 431 aa19.34■□□□□ 0.69
COL27A1-205ENST00000485397 EPB41L5Q9HCM4 733 aa19.34■□□□□ 0.69
COL27A1-205ENST00000485397 MRPL40Q9NQ50 206 aaKnown RBP19.34■□□□□ 0.69
COL27A1-205ENST00000485397 DGKBQ9Y6T7 804 aa19.34■□□□□ 0.69
COL27A1-205ENST00000485397 GCN1Q92616 2671 aaKnown RBP19.34■□□□□ 0.69
COL27A1-205ENST00000485397 CFAP69A5D8W1 941 aa19.33■□□□□ 0.68
COL27A1-205ENST00000485397 TMEM202A6NGA9 273 aa19.33■□□□□ 0.68
COL27A1-205ENST00000485397 TMEM191CA6NGB0 347 aa19.33■□□□□ 0.68
COL27A1-205ENST00000485397 A8MX80 341 aa19.33■□□□□ 0.68
COL27A1-205ENST00000485397 EIF3CLB5ME19 914 aaKnown RBP19.33■□□□□ 0.68
COL27A1-205ENST00000485397 PLA2G2AP14555 144 aa19.33■□□□□ 0.68
COL27A1-205ENST00000485397 GM2AP17900 193 aa19.33■□□□□ 0.68
COL27A1-205ENST00000485397 MIPP30301 263 aa19.33■□□□□ 0.68
COL27A1-205ENST00000485397 CLN3Q13286 438 aa19.33■□□□□ 0.68
COL27A1-205ENST00000485397 PPP6R3Q5H9R7 873 aaPredicted RBP19.33■□□□□ 0.68
COL27A1-205ENST00000485397 CYP4V2Q6ZWL3 525 aaPredicted RBP19.33■□□□□ 0.68
COL27A1-205ENST00000485397 ZNF605Q86T29 641 aa19.33■□□□□ 0.68
COL27A1-205ENST00000485397 SFTPA2Q8IWL1 248 aa19.33■□□□□ 0.68
COL27A1-205ENST00000485397 FBXO39Q8N4B4 442 aa19.33■□□□□ 0.68
COL27A1-205ENST00000485397 PAF1Q8N7H5 531 aa19.33■□□□□ 0.68
COL27A1-205ENST00000485397 CCDC97Q96F63 343 aaPredicted RBP19.33■□□□□ 0.68
COL27A1-205ENST00000485397 LIN37Q96GY3 246 aaPredicted RBP19.33■□□□□ 0.68
COL27A1-205ENST00000485397 EIF3CQ99613 913 aaKnown RBP19.33■□□□□ 0.68
COL27A1-205ENST00000485397 SEMA4CQ9C0C4 833 aa19.33■□□□□ 0.68
COL27A1-205ENST00000485397 FGF22Q9HCT0 170 aa19.33■□□□□ 0.68
COL27A1-205ENST00000485397 LRP4O75096 1905 aa19.32■□□□□ 0.68
COL27A1-205ENST00000485397 TTC24A2A3L6 582 aaPredicted RBP19.32■□□□□ 0.68
COL27A1-205ENST00000485397 LRRC53A6NM62 1247 aa19.32■□□□□ 0.68
COL27A1-205ENST00000485397 D6RAR5 112 aa19.32■□□□□ 0.68
COL27A1-205ENST00000485397 CACNB4O00305 520 aaPredicted RBP19.32■□□□□ 0.68
COL27A1-205ENST00000485397 TRAFD1O14545 582 aaPredicted RBP19.32■□□□□ 0.68
COL27A1-205ENST00000485397 ELFN1P0C7U0 828 aa19.32■□□□□ 0.68
COL27A1-205ENST00000485397 HGFP14210 728 aa19.32■□□□□ 0.68
COL27A1-205ENST00000485397 MLLT3P42568 568 aaPredicted RBP19.32■□□□□ 0.68
COL27A1-205ENST00000485397 SCNN1BP51168 640 aa19.32■□□□□ 0.68
COL27A1-205ENST00000485397 KIAA1024LP59773 190 aa19.32■□□□□ 0.68
COL27A1-205ENST00000485397 IL10RBQ08334 325 aa19.32■□□□□ 0.68
COL27A1-205ENST00000485397 PPP1R2P3Q6NXS1 205 aa19.32■□□□□ 0.68
COL27A1-205ENST00000485397 DPPA4Q7L190 304 aa19.32■□□□□ 0.68
COL27A1-205ENST00000485397 RAB11FIP2Q7L804 512 aa19.32■□□□□ 0.68
COL27A1-205ENST00000485397 TAF8Q7Z7C8 310 aa19.32■□□□□ 0.68
COL27A1-205ENST00000485397 PELI3Q8N2H9 469 aa19.32■□□□□ 0.68
COL27A1-205ENST00000485397 Q8N9G6 341 aaPredicted RBP19.32■□□□□ 0.68
COL27A1-205ENST00000485397 GPR156Q8NFN8 814 aa19.32■□□□□ 0.68
COL27A1-205ENST00000485397 OR56A4Q8NGH8 313 aa19.32■□□□□ 0.68
COL27A1-205ENST00000485397 SNRNP27Q8WVK2 155 aaKnown RBP19.32■□□□□ 0.68
COL27A1-205ENST00000485397 TTC9Q92623 222 aa19.32■□□□□ 0.68
COL27A1-205ENST00000485397 WBP1Q96G27 269 aa19.32■□□□□ 0.68
COL27A1-205ENST00000485397 LRRN3Q9H3W5 708 aa19.32■□□□□ 0.68
COL27A1-205ENST00000485397 CWC15Q9P013 229 aaKnown RBP19.32■□□□□ 0.68
COL27A1-205ENST00000485397 MYO6Q9UM54 1294 aa19.32■□□□□ 0.68
COL27A1-205ENST00000485397 K7ENP7 123 aa19.31■□□□□ 0.68
COL27A1-205ENST00000485397 PLD2O14939 933 aa19.31■□□□□ 0.68
COL27A1-205ENST00000485397 PRPSAP2O60256 369 aa19.31■□□□□ 0.68
COL27A1-205ENST00000485397 RNF8O76064 485 aa19.31■□□□□ 0.68
COL27A1-205ENST00000485397 FTLP02792 175 aaPredicted RBP19.31■□□□□ 0.68
COL27A1-205ENST00000485397 ITGA2BP08514 1039 aa19.31■□□□□ 0.68
COL27A1-205ENST00000485397 UGT1A5P35504 534 aa19.31■□□□□ 0.68
COL27A1-205ENST00000485397 INHBCP55103 352 aa19.31■□□□□ 0.68
COL27A1-205ENST00000485397 NSUN2Q08J23 767 aaKnown RBP eCLIP19.31■□□□□ 0.68
COL27A1-205ENST00000485397 LY6DQ14210 128 aa19.31■□□□□ 0.68
COL27A1-205ENST00000485397 RFTN1Q14699 578 aaPredicted RBP19.31■□□□□ 0.68
COL27A1-205ENST00000485397 ASIC2Q16515 512 aa19.31■□□□□ 0.68
COL27A1-205ENST00000485397 ZSCAN23Q3MJ62 389 aa19.31■□□□□ 0.68
COL27A1-205ENST00000485397 KIAA1614Q5VZ46 1190 aa19.31■□□□□ 0.68
COL27A1-205ENST00000485397 E4F1Q66K89 784 aaPredicted RBP19.31■□□□□ 0.68
COL27A1-205ENST00000485397 INO80CQ6PI98 192 aaPredicted RBP19.31■□□□□ 0.68
COL27A1-205ENST00000485397 ZNF571Q7Z3V5 609 aaPredicted RBP19.31■□□□□ 0.68
COL27A1-205ENST00000485397 FAM46DQ8NEK8 389 aa19.31■□□□□ 0.68
COL27A1-205ENST00000485397 OR6C4Q8NGE1 309 aa19.31■□□□□ 0.68
COL27A1-205ENST00000485397 CCL4L1Q8NHW4 92 aa19.31■□□□□ 0.68
COL27A1-205ENST00000485397 GBP4Q96PP9 640 aa19.31■□□□□ 0.68
COL27A1-205ENST00000485397 LGR4Q9BXB1 951 aa19.31■□□□□ 0.68
COL27A1-205ENST00000485397 TMEM168Q9H0V1 697 aa19.31■□□□□ 0.68
COL27A1-205ENST00000485397 HAUS4Q9H6D7 363 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms