RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 C9orf78Q9NZ63 289 aaPredicted RBP4.21□□□□□ -1.74
SMC4-215ENST00000484799 ZNF224Q9NZL3 707 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 HDAC6Q9UBN7 1215 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 SLC9A2Q9UBY0 812 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.21□□□□□ -1.74
SMC4-215ENST00000484799 SIX4Q9UIU6 781 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 CDC14AQ9UNH5 594 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 DNAJC16Q9Y2G8 782 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 GPR52Q9Y2T5 361 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 LRRFIP2Q9Y608 721 aaKnown RBP4.21□□□□□ -1.74
SMC4-215ENST00000484799 SH2D7A6NKC9 451 aaPredicted RBP4.2□□□□□ -1.74
SMC4-215ENST00000484799 C16orf97H3BN30 126 aa4.2□□□□□ -1.74
SMC4-215ENST00000484799 KLK10O43240 276 aa4.2□□□□□ -1.74
SMC4-215ENST00000484799 TSPAN3O60637 253 aa4.2□□□□□ -1.74
SMC4-215ENST00000484799 SRCP12931 536 aa4.2□□□□□ -1.74
SMC4-215ENST00000484799 ANOS1P23352 680 aa4.2□□□□□ -1.74
SMC4-215ENST00000484799 MCM3P25205 808 aa4.2□□□□□ -1.74
SMC4-215ENST00000484799 MAPK9P45984 424 aa4.2□□□□□ -1.74
SMC4-215ENST00000484799 CXCR3P49682 368 aa4.2□□□□□ -1.74
SMC4-215ENST00000484799 BLKP51451 505 aa4.2□□□□□ -1.74
SMC4-215ENST00000484799 NR1H2P55055 460 aa4.2□□□□□ -1.74
SMC4-215ENST00000484799 FOXD4Q12950 439 aaPredicted RBP4.2□□□□□ -1.74
SMC4-215ENST00000484799 TBX2Q13207 712 aaPredicted RBP4.2□□□□□ -1.74
SMC4-215ENST00000484799 MRGPRG-AS1Q2M3A8 158 aa4.2□□□□□ -1.74
SMC4-215ENST00000484799 SOWAHAQ2M3V2 549 aa4.2□□□□□ -1.74
SMC4-215ENST00000484799 CCNI2Q6ZMN8 369 aaPredicted RBP4.2□□□□□ -1.74
SMC4-215ENST00000484799 MOB3CQ70IA8 216 aa4.2□□□□□ -1.74
SMC4-215ENST00000484799 SLC26A9Q7LBE3 791 aa4.2□□□□□ -1.74
SMC4-215ENST00000484799 C2CD5Q86YS7 1000 aa4.2□□□□□ -1.74
SMC4-215ENST00000484799 DSELQ8IZU8 1212 aa4.2□□□□□ -1.74
SMC4-215ENST00000484799 USP38Q8NB14 1042 aa4.2□□□□□ -1.74
SMC4-215ENST00000484799 IL17REQ8NFR9 667 aa4.2□□□□□ -1.74
SMC4-215ENST00000484799 DMBX1Q8NFW5 382 aa4.2□□□□□ -1.74
SMC4-215ENST00000484799 TMEM19Q96HH6 336 aa4.2□□□□□ -1.74
SMC4-215ENST00000484799 ZSCAN31Q96LW9 406 aaPredicted RBP4.2□□□□□ -1.74
SMC4-215ENST00000484799 COG8Q96MW5 612 aa4.2□□□□□ -1.74
SMC4-215ENST00000484799 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.19□□□□□ -1.74
SMC4-215ENST00000484799 KLRF2D3W0D1 207 aa4.19□□□□□ -1.74
SMC4-215ENST00000484799 SERPINB2P05120 415 aa4.19□□□□□ -1.74
SMC4-215ENST00000484799 TERF1P54274 439 aa4.19□□□□□ -1.74
SMC4-215ENST00000484799 ZNF155Q12901 538 aaPredicted RBP4.19□□□□□ -1.74
SMC4-215ENST00000484799 RBBP5Q15291 538 aaKnown RBP4.19□□□□□ -1.74
SMC4-215ENST00000484799 ATP13A5Q4VNC0 1218 aa4.19□□□□□ -1.74
SMC4-215ENST00000484799 ESCO2Q56NI9 601 aa4.19□□□□□ -1.74
SMC4-215ENST00000484799 JAKMIP3Q5VZ66 844 aa4.19□□□□□ -1.74
SMC4-215ENST00000484799 CPLX2Q6PUV4 134 aaKnown RBP4.19□□□□□ -1.74
SMC4-215ENST00000484799 CYP26C1Q6V0L0 522 aa4.19□□□□□ -1.74
SMC4-215ENST00000484799 ADGRG6Q86SQ4 1221 aa4.19□□□□□ -1.74
SMC4-215ENST00000484799 KIAA2013Q8IYS2 634 aa4.19□□□□□ -1.74
SMC4-215ENST00000484799 IL17RCQ8NAC3 791 aa4.19□□□□□ -1.74
SMC4-215ENST00000484799 SCCPDHQ8NBX0 429 aa4.19□□□□□ -1.74
SMC4-215ENST00000484799 MAGEC3Q8TD91 643 aa4.19□□□□□ -1.74
SMC4-215ENST00000484799 RAB40AQ8WXH6 277 aa4.19□□□□□ -1.74
SMC4-215ENST00000484799 USP13Q92995 863 aaPredicted RBP4.19□□□□□ -1.74
SMC4-215ENST00000484799 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.19□□□□□ -1.74
SMC4-215ENST00000484799 MROH8Q9H579 483 aa4.19□□□□□ -1.74
SMC4-215ENST00000484799 EPHX3Q9H6B9 360 aa4.19□□□□□ -1.74
SMC4-215ENST00000484799 TERF2IPQ9NYB0 399 aa4.19□□□□□ -1.74
SMC4-215ENST00000484799 CISD1Q9NZ45 108 aaKnown RBP4.19□□□□□ -1.74
SMC4-215ENST00000484799 GJD2Q9UKL4 321 aa4.19□□□□□ -1.74
SMC4-215ENST00000484799 AKR1B15C9JRZ8 316 aaPredicted RBP4.18□□□□□ -1.74
SMC4-215ENST00000484799 FAM72CH0Y354 149 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 PER2O15055 1255 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 SRD5A1P18405 259 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 GNL1P36915 607 aaPredicted RBP4.18□□□□□ -1.74
SMC4-215ENST00000484799 SLC12A1Q13621 1099 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 EFR3AQ14156 821 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 TAF5Q15542 800 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 TAF12Q16514 161 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 FAM72AQ5TYM5 149 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 FAM69BQ5VUD6 431 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 KRTAP5-11Q6L8G4 156 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 FAM72DQ6L9T8 149 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 ADAM5Q6NVV9 412 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 WDR73Q6P4I2 378 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 ZNF449Q6P9G9 518 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 FOXL2NBQ6ZUU3 175 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 PCGF5Q86SE9 256 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 GPAT4Q86UL3 456 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 FAM72BQ86X60 149 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 ZCCHC9Q8N567 271 aaKnown RBP4.18□□□□□ -1.74
SMC4-215ENST00000484799 NAXEQ8NCW5 288 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 CDCA5Q96FF9 252 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 MPP4Q96JB8 637 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 PPM1MQ96MI6 270 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 NUF2Q9BZD4 464 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 SPRY4Q9C004 299 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 MMP28Q9H239 520 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 TAOK3Q9H2K8 898 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 ZHX3Q9H4I2 956 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 ITM2CQ9NQX7 267 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 SAGE1Q9NXZ1 904 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 PDP2Q9P2J9 529 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 RCOR1Q9UKL0 485 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 KCNS2Q9ULS6 477 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 CARD8Q9Y2G2 431 aa4.18□□□□□ -1.74
SMC4-215ENST00000484799 A0A1B0GVC2 190 aa4.17□□□□□ -1.74
SMC4-215ENST00000484799 WNT9BO14905 357 aa4.17□□□□□ -1.74
SMC4-215ENST00000484799 NCAM2O15394 837 aa4.17□□□□□ -1.74
SMC4-215ENST00000484799 PRSS1P07477 247 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms