RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 AP1S1P61966 158 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 BCL2L1Q07817 233 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 C19orf57Q0VDD7 668 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 DPYSQ14117 519 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 FILIP1LQ4L180 1135 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 OGFOD3Q6PK18 319 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 LIPIQ6XZB0 460 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 ZNF571Q7Z3V5 609 aaPredicted RBP11.53□□□□□ -0.56
SCFD1-206ENST00000484733 CLEC14AQ86T13 490 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 HID1Q8IV36 788 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 TSACCQ96A04 125 aaPredicted RBP11.53□□□□□ -0.56
SCFD1-206ENST00000484733 LIN37Q96GY3 246 aaPredicted RBP11.53□□□□□ -0.56
SCFD1-206ENST00000484733 PSKH2Q96QS6 385 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 RBM15Q96T37 977 aaKnown RBP eCLIP11.53□□□□□ -0.56
SCFD1-206ENST00000484733 HAUS4Q9H6D7 363 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 SP110Q9HB58 689 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 PCSK1NQ9UHG2 260 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 DOLKQ9UPQ8 538 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 ATRXP46100 2492 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 IGSF10Q6WRI0 2623 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 ANKRD36A6QL64 1941 aa11.52□□□□□ -0.56
SCFD1-206ENST00000484733 CCDC187A0A096LP49 1063 aa11.52□□□□□ -0.57
SCFD1-206ENST00000484733 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.52□□□□□ -0.57
SCFD1-206ENST00000484733 TMCO5BA8MYB1 307 aa11.52□□□□□ -0.57
SCFD1-206ENST00000484733 CELA2BP08218 269 aaPredicted RBP11.52□□□□□ -0.57
SCFD1-206ENST00000484733 TRIM23P36406 574 aa11.52□□□□□ -0.57
SCFD1-206ENST00000484733 CXADRP78310 365 aa11.52□□□□□ -0.57
SCFD1-206ENST00000484733 RHDQ02161 417 aa11.52□□□□□ -0.57
SCFD1-206ENST00000484733 ISCUQ9H1K1 167 aa11.52□□□□□ -0.57
SCFD1-206ENST00000484733 MRPL47Q9HD33 250 aaKnown RBP11.52□□□□□ -0.57
SCFD1-206ENST00000484733 KCTD5Q9NXV2 234 aa11.52□□□□□ -0.57
SCFD1-206ENST00000484733 CWC15Q9P013 229 aaKnown RBP11.52□□□□□ -0.57
SCFD1-206ENST00000484733 CNOT8Q9UFF9 292 aaKnown RBP11.52□□□□□ -0.57
SCFD1-206ENST00000484733 SEPT3Q9UH03 358 aa11.52□□□□□ -0.57
SCFD1-206ENST00000484733 GPR34Q9UPC5 381 aa11.52□□□□□ -0.57
SCFD1-206ENST00000484733 BAHCC1Q9P281 2608 aa11.52□□□□□ -0.57
SCFD1-206ENST00000484733 ASXL3Q9C0F0 2248 aa11.52□□□□□ -0.57
SCFD1-206ENST00000484733 ERVH48-1M5A8F1 160 aa11.52□□□□□ -0.57
SCFD1-206ENST00000484733 DDX3XO00571 662 aaKnown RBP eCLIP11.52□□□□□ -0.571e-13■■■■□ 23.8
SCFD1-206ENST00000484733 ATMINO43313 823 aaPredicted RBP11.52□□□□□ -0.57
SCFD1-206ENST00000484733 LRCH4O75427 683 aa11.52□□□□□ -0.57
SCFD1-206ENST00000484733 PNLIPP16233 465 aa11.52□□□□□ -0.57
SCFD1-206ENST00000484733 KELP23276 732 aa11.52□□□□□ -0.57
SCFD1-206ENST00000484733 HSPA9P38646 679 aaKnown RBP11.52□□□□□ -0.57
SCFD1-206ENST00000484733 PDX1P52945 283 aa11.52□□□□□ -0.57
SCFD1-206ENST00000484733 SPIDRQ14159 915 aa11.52□□□□□ -0.57
SCFD1-206ENST00000484733 C3orf38Q5JPI3 329 aa11.52□□□□□ -0.57
SCFD1-206ENST00000484733 NPWQ8N729 165 aa11.52□□□□□ -0.57
SCFD1-206ENST00000484733 KYQ8NBH2 561 aa11.52□□□□□ -0.57
SCFD1-206ENST00000484733 GPR156Q8NFN8 814 aa11.52□□□□□ -0.57
SCFD1-206ENST00000484733 LAMA5O15230 3695 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 A0A1B0GTH6 734 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 CAPN8A6NHC0 703 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 HTRA2O43464 458 aaPredicted RBP11.51□□□□□ -0.57
SCFD1-206ENST00000484733 C1QL1O75973 258 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 RECQL5O94762 991 aaPredicted RBP11.51□□□□□ -0.57
SCFD1-206ENST00000484733 PCCBP05166 539 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 GM2AP17900 193 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 EIF3IQ13347 325 aaKnown RBP11.51□□□□□ -0.57
SCFD1-206ENST00000484733 LBRQ14739 615 aaKnown RBP11.51□□□□□ -0.57
SCFD1-206ENST00000484733 DPYSL2Q16555 572 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 ANO6Q4KMQ2 910 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 BOLA3Q53S33 107 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 FIGNQ5HY92 759 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 RALGPS1Q5JS13 557 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 CRTC1Q6UUV9 634 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 PCSK4Q6UW60 755 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 ARHGAP36Q6ZRI8 547 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 ARL14Q8N4G2 192 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 PLA2G15Q8NCC3 412 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 OR56A4Q8NGH8 313 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 PCDH19Q8TAB3 1148 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 FUBP1Q96AE4 644 aaKnown RBP11.51□□□□□ -0.57
SCFD1-206ENST00000484733 TRIM7Q9C029 511 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 TMEM63CQ9P1W3 806 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 GULP1Q9UBP9 304 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 APPL1Q9UKG1 709 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 OR1A2Q9Y585 309 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 H3BRJ5 948 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 DFFAO00273 331 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 CACNB4O00305 520 aaPredicted RBP11.51□□□□□ -0.57
SCFD1-206ENST00000484733 SOCS5O75159 536 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 KLHL30Q0D2K2 578 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 E4F1Q66K89 784 aaPredicted RBP11.51□□□□□ -0.57
SCFD1-206ENST00000484733 CBARPQ8N350 705 aaPredicted RBP11.51□□□□□ -0.57
SCFD1-206ENST00000484733 OR1E3Q8WZA6 343 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 CCDC74AQ96AQ1 378 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 ZNF653Q96CK0 615 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 COQ10AQ96MF6 247 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 NSMCE3Q96MG7 304 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 ZWILCHQ9H900 591 aa11.51□□□□□ -0.57
SCFD1-206ENST00000484733 PDE2AO00408 941 aaPredicted RBP11.5□□□□□ -0.57
SCFD1-206ENST00000484733 PEX11BO96011 259 aa11.5□□□□□ -0.57
SCFD1-206ENST00000484733 PRKCGP05129 697 aa11.5□□□□□ -0.57
SCFD1-206ENST00000484733 ELFN1P0C7U0 828 aa11.5□□□□□ -0.57
SCFD1-206ENST00000484733 CR2P20023 1033 aa11.5□□□□□ -0.57
SCFD1-206ENST00000484733 CCKBRP32239 447 aa11.5□□□□□ -0.57
SCFD1-206ENST00000484733 VAC14Q08AM6 782 aa11.5□□□□□ -0.57
SCFD1-206ENST00000484733 TSR1Q2NL82 804 aaKnown RBP11.5□□□□□ -0.57
SCFD1-206ENST00000484733 PPP6R3Q5H9R7 873 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms