RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 PLD5Q8N7P1 536 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 PLA2G15Q8NCC3 412 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 ZNF548Q8NEK5 533 aaPredicted RBP12.96□□□□□ -0.33
HDAC1-209ENST00000484305 MAML1Q92585 1016 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 FATE1Q969F0 183 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 SEMA3CQ99985 751 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 TCEAL2Q9H3H9 227 aaPredicted RBP12.96□□□□□ -0.33
HDAC1-209ENST00000484305 GOLPH3Q9H4A6 298 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 B4GALT6Q9UBX8 382 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 PCDHA13Q9Y5I0 950 aa12.96□□□□□ -0.33
HDAC1-209ENST00000484305 KNTC1P50748 2209 aa12.96□□□□□ -0.34
HDAC1-209ENST00000484305 KMT2BQ9UMN6 2715 aaPredicted RBP12.95□□□□□ -0.34
HDAC1-209ENST00000484305 NEMP2A6NFY4 417 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 SOWAHDA6NJG2 315 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 ZNF487B1APH4 448 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 H3BM21 787 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 SCAMP1O15126 338 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 RFPL3O75679 317 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 PGLSO95336 258 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 KRT1P04264 644 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 PCCBP05166 539 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 C1SP09871 688 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 ELFN1P0C7U0 828 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 CCNB1P14635 433 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 SLC1A1P43005 524 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 NOP2P46087 812 aaKnown RBP12.95□□□□□ -0.34
HDAC1-209ENST00000484305 HADHBP55084 474 aaKnown RBP12.95□□□□□ -0.34
HDAC1-209ENST00000484305 CLDN6P56747 220 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 DSC2Q02487 901 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 PTPRRQ15256 657 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 SMAD1Q15797 465 aaKnown RBP12.95□□□□□ -0.34
HDAC1-209ENST00000484305 SLC9A4Q6AI14 798 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 ALG1LQ6GMV1 187 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 MACC1Q6ZN28 852 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 NYAP1Q6ZVC0 841 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 RHOT1Q8IXI2 618 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 CCNYQ8ND76 341 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 RNF25Q96BH1 459 aaPredicted RBP12.95□□□□□ -0.34
HDAC1-209ENST00000484305 PANX2Q96RD6 677 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 LGMNQ99538 433 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 APOOQ9BUR5 198 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 POLR1EQ9GZS1 481 aaKnown RBP12.95□□□□□ -0.34
HDAC1-209ENST00000484305 RBM22Q9NW64 420 aaKnown RBP eCLIP12.95□□□□□ -0.34
HDAC1-209ENST00000484305 NLGN3Q9NZ94 848 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 OR1A2Q9Y585 309 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 PCDHGA1Q9Y5H4 931 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 HEY1Q9Y5J3 304 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 RAI2Q9Y5P3 530 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 CACNA1BQ00975 2339 aa12.95□□□□□ -0.34
HDAC1-209ENST00000484305 WDFY3Q8IZQ1 3526 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 LY6G6EA0A0G2JKS1 128 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 A0A1W2PQ67 120 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 FAM149AA5PLN7 773 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 K7ESM1 405 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 TOR1BO14657 336 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 AQP9O43315 295 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 SPOPO43791 374 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 GCATO75600 419 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 HLA-DQB2P05538 268 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 PDHA1P08559 390 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 MYF5P13349 255 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 MX2P20592 715 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 ACP1P24666 158 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 VIPR1P32241 457 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 CYLC1P35663 651 aaPredicted RBP12.94□□□□□ -0.34
HDAC1-209ENST00000484305 PEX5P50542 639 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 ACOX1Q15067 660 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 SPA17Q15506 151 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 CNGA3Q16281 694 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 HS1BP3Q53T59 392 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 FAM182AQ5T1J6 154 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 ARMC12Q5T9G4 340 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 FAXCQ5TGI0 409 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 NPNTQ6UXI9 565 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 VSIG1Q86XK7 387 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 CCDC13Q8IYE1 715 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 PHACTR4Q8IZ21 702 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 PELI3Q8N2H9 469 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 GALNT15Q8N3T1 639 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 KDF1Q8NAX2 398 aaPredicted RBP12.94□□□□□ -0.34
HDAC1-209ENST00000484305 ARRDC2Q8TBH0 407 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.94□□□□□ -0.34
HDAC1-209ENST00000484305 LMX1AQ8TE12 382 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 PIH1D2Q8WWB5 315 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 HDAC11Q96DB2 347 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 APOLD1Q96LR9 279 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 COQ10AQ96MF6 247 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 MAK16Q9BXY0 300 aaKnown RBP12.94□□□□□ -0.34
HDAC1-209ENST00000484305 DDX56Q9NY93 547 aaKnown RBP12.94□□□□□ -0.34
HDAC1-209ENST00000484305 PHTF1Q9UMS5 762 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 TTLL3Q9Y4R7 772 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 ALG6Q9Y672 507 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 EPN1Q9Y6I3 576 aaPredicted RBP12.94□□□□□ -0.34
HDAC1-209ENST00000484305 CSNK1G3Q9Y6M4 447 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 U3KQA8 63 aa12.94□□□□□ -0.34
HDAC1-209ENST00000484305 ASXL3Q9C0F0 2248 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 A0A0U1RQS6 177 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 RCCD1A6NED2 376 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 NPIPB15A6NHN6 443 aaPredicted RBP12.93□□□□□ -0.34
HDAC1-209ENST00000484305 KCNK1O00180 336 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms