RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 HOXC13P31276 330 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 OR1D2P34982 312 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 NTHL1P78549 312 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 SLC25A3Q00325 362 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 ZBTB17Q13105 803 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 KLF10Q13118 480 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 CUL3Q13618 768 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 HTR4Q13639 388 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 PABPC1LQ4VXU2 614 aaKnown RBP8.2□□□□□ -1.1
SORT1-205ENST00000483508 PPM1JQ5JR12 505 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 SH2D4BQ5SQS7 431 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 FAM182AQ5T1J6 154 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 FAM72AQ5TYM5 149 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 SEL1L3Q68CR1 1132 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 FAM72DQ6L9T8 149 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 TIGD7Q6NT04 549 aaPredicted RBP8.2□□□□□ -1.1
SORT1-205ENST00000483508 PKN3Q6P5Z2 889 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 PARM1Q6UWI2 310 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 CES3Q6UWW8 571 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 IZUMO2Q6UXV1 221 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 CMC1Q7Z7K0 106 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 ZC3HC1Q86WB0 502 aaKnown RBP8.2□□□□□ -1.1
SORT1-205ENST00000483508 FAM72BQ86X60 149 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 METTL23Q86XA0 190 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 TMEM126BQ8IUX1 230 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 LRRC49Q8IUZ0 686 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 KIAA2013Q8IYS2 634 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 FBXW8Q8N3Y1 598 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 CPSF7Q8N684 471 aaKnown RBP8.2□□□□□ -1.1
SORT1-205ENST00000483508 NPWQ8N729 165 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 GSTCDQ8NEC7 633 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 PPHLN1Q8NEY8 458 aaKnown RBP8.2□□□□□ -1.1
SORT1-205ENST00000483508 ZMIZ2Q8NF64 920 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 SPDYE1Q8NFV5 336 aaPredicted RBP8.2□□□□□ -1.1
SORT1-205ENST00000483508 PJA1Q8NG27 643 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 RP9Q8TA86 221 aaKnown RBP8.2□□□□□ -1.1
SORT1-205ENST00000483508 PCED1BQ96HM7 432 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 CLPTM1LQ96KA5 538 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 TBL1YQ9BQ87 522 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 CLSTN3Q9BQT9 956 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 PAAF1Q9BRP4 392 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 ACE2Q9BYF1 805 aaPredicted RBP8.2□□□□□ -1.1
SORT1-205ENST00000483508 CEP41Q9BYV8 373 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 FOXQ1Q9C009 403 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 CATSPERBQ9H7T0 1116 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 COG4Q9H9E3 785 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 TCF7L2Q9NQB0 619 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 TMPRSS4Q9NRS4 437 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 IARS2Q9NSE4 1012 aaKnown RBP8.2□□□□□ -1.1
SORT1-205ENST00000483508 SPATA6Q9NWH7 488 aaPredicted RBP8.2□□□□□ -1.1
SORT1-205ENST00000483508 HACD3Q9P035 362 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 DLGAP2Q9P1A6 1054 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 DSEQ9UL01 958 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 ASB3Q9Y575 518 aa8.2□□□□□ -1.1
SORT1-205ENST00000483508 NUP205Q92621 2012 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 A0A087X1B8 175 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 KANSL1LA0AUZ9 987 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 RGSL1A5PLK6 1076 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 MATN2O00339 956 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 PRRG1O14668 218 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 ATP9BO43861 1147 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 NPHS1O60500 1241 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 LRIG2O94898 1065 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 BAG2O95816 211 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 IGLV3-25P01717 112 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 FESP07332 822 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 USP17L7P0C7H9 530 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 SP9P0CG40 484 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 PIM1P11309 404 aaPredicted RBP8.19□□□□□ -1.1
SORT1-205ENST00000483508 ODC1P11926 461 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 HOXA9P31269 272 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 ARRB2P32121 409 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 RPL14P50914 215 aaKnown RBP8.19□□□□□ -1.1
SORT1-205ENST00000483508 CACNA2D1P54289 1103 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 MTTPP55157 894 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 ARPP19P56211 112 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 STARD6P59095 220 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 SATB1Q01826 763 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 PRKCQQ04759 706 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 TBL3Q12788 808 aaKnown RBP8.19□□□□□ -1.1
SORT1-205ENST00000483508 CDC16Q13042 620 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 CCNIQ14094 377 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 GRM3Q14832 879 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 MAPRE1Q15691 268 aaKnown RBP8.19□□□□□ -1.1
SORT1-205ENST00000483508 MLF2Q15773 248 aaPredicted RBP8.19□□□□□ -1.1
SORT1-205ENST00000483508 SLC44A4Q53GD3 710 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 HSP90AA5PQ58FG0 334 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 CERCAMQ5T4B2 595 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 OR52E8Q6IFG1 317 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 ZFP1Q6P2D0 407 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 ANKS3Q6ZW76 656 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 RAPH1Q70E73 1250 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 BHLHA9Q7RTU4 235 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 DGLUCYQ7Z3D6 616 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 SDCCAG8Q86SQ7 713 aaPredicted RBP8.19□□□□□ -1.1
SORT1-205ENST00000483508 PDSS2Q86YH6 399 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 KBTBD2Q8IY47 623 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 DEFB107AQ8IZN7 70 aa8.19□□□□□ -1.1
SORT1-205ENST00000483508 PLD6Q8N2A8 252 aaKnown RBP8.19□□□□□ -1.1
SORT1-205ENST00000483508 ELMOD1Q8N336 334 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms