RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 CCDC162PA2VCL2 907 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 OR51F1A6NGY5 319 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 TK2O00142 265 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 LEFTY2O00292 366 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 CCL22O00626 93 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 FGF19O95750 216 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 GLP2RO95838 553 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 PDHA1P08559 390 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 NQO1P15559 274 aaKnown RBP13.29□□□□□ -0.28
CPNE1-225ENST00000483495 ALOX15P16050 662 aaPredicted RBP13.29□□□□□ -0.28
CPNE1-225ENST00000483495 HOXB8P17481 243 aaPredicted RBP13.29□□□□□ -0.28
CPNE1-225ENST00000483495 KPNA2P52292 529 aaKnown RBP13.29□□□□□ -0.28
CPNE1-225ENST00000483495 PGGT1BP53609 377 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 SLC12A2P55011 1212 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 AQP5P55064 265 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 ZNF460Q14592 562 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 PPM1LQ5SGD2 360 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 HECTD2Q5U5R9 776 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 MRNIPQ6NTE8 343 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 RNF135Q8IUD6 432 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.29□□□□□ -0.28
CPNE1-225ENST00000483495 OR13C4Q8NGS5 318 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 SPPL3Q8TCT6 385 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 PPP4R1Q8TF05 950 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 SLC22A17Q8WUG5 538 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 NXNL1Q96CM4 212 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 KLHL29Q96CT2 875 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 CDKN2AIPNLQ96HQ2 116 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 CORO1BQ9BR76 489 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 C2orf49Q9BVC5 232 aaPredicted RBP13.29□□□□□ -0.28
CPNE1-225ENST00000483495 ADGRE3Q9BY15 652 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 LRMDAQ9H2I8 198 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 FAM96AQ9H5X1 160 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 SUDS3Q9H7L9 328 aaPredicted RBP13.29□□□□□ -0.28
CPNE1-225ENST00000483495 IGSF5Q9NSI5 407 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 MARCOQ9UEW3 520 aaPredicted RBP13.29□□□□□ -0.28
CPNE1-225ENST00000483495 VWA7Q9Y334 891 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 SLC4A7Q9Y6M7 1214 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 DENND4CQ5VZ89 1909 aa13.29□□□□□ -0.28
CPNE1-225ENST00000483495 TRAFD1O14545 582 aaPredicted RBP13.28□□□□□ -0.28
CPNE1-225ENST00000483495 CD3EAPO15446 510 aaKnown RBP13.28□□□□□ -0.28
CPNE1-225ENST00000483495 CCL16O15467 120 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 TLL1O43897 1013 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 FZD6O60353 706 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 HNRNPCL1O60812 293 aaKnown RBP13.28□□□□□ -0.28
CPNE1-225ENST00000483495 PIRTP0C851 137 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 KITP10721 976 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 MYL4P12829 197 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 DDX6P26196 483 aaKnown RBP eCLIP13.28□□□□□ -0.284e-9■■□□□ 11.8
CPNE1-225ENST00000483495 CTNNB1P35222 781 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 SLC26A3P40879 764 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 CCR2P41597 374 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 UBE3AQ05086 875 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 TRAF2Q12933 501 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 PTPRCAPQ14761 206 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 KRT72Q14CN4 511 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 TYSND1Q2T9J0 566 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 LIPMQ5VYY2 423 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 PLPP4Q5VZY2 271 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 FBXW10Q5XX13 1052 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 NAPRTQ6XQN6 538 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 MDGA1Q8NFP4 955 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 OR4L1Q8NH43 312 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 FIBINQ8TAL6 211 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 DDI1Q8WTU0 396 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 INPP5DQ92835 1189 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 ACDQ96AP0 544 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 RMDN1Q96DB5 314 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 UBXN10Q96LJ8 280 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 NDNQ99608 321 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 MRPL57Q9BQC6 102 aaKnown RBP13.28□□□□□ -0.28
CPNE1-225ENST00000483495 TUBB6Q9BUF5 446 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 MRPL46Q9H2W6 279 aaKnown RBP13.28□□□□□ -0.28
CPNE1-225ENST00000483495 CPSF2Q9P2I0 782 aaKnown RBP13.28□□□□□ -0.28
CPNE1-225ENST00000483495 RWDD3Q9Y3V2 267 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 PCDHGC4Q9Y5F7 938 aa13.28□□□□□ -0.28
CPNE1-225ENST00000483495 ANKRD66B4E2M5 251 aa13.27□□□□□ -0.28
CPNE1-225ENST00000483495 BUD23O43709 281 aaKnown RBP13.27□□□□□ -0.28
CPNE1-225ENST00000483495 GJA1P17302 382 aa13.27□□□□□ -0.28
CPNE1-225ENST00000483495 TARSP26639 723 aaKnown RBP13.27□□□□□ -0.28
CPNE1-225ENST00000483495 STC1P52823 247 aa13.27□□□□□ -0.28
CPNE1-225ENST00000483495 PLK1P53350 603 aa13.27□□□□□ -0.28
CPNE1-225ENST00000483495 RHOAP61586 193 aa13.27□□□□□ -0.28
CPNE1-225ENST00000483495 AP1S1P61966 158 aa13.27□□□□□ -0.28
CPNE1-225ENST00000483495 ZBTB16Q05516 673 aa13.27□□□□□ -0.28
CPNE1-225ENST00000483495 FAM45BPQ6NSW5 357 aa13.27□□□□□ -0.28
CPNE1-225ENST00000483495 RETSATQ6NUM9 610 aa13.27□□□□□ -0.28
CPNE1-225ENST00000483495 GLT6D1Q7Z4J2 308 aa13.27□□□□□ -0.28
CPNE1-225ENST00000483495 TBC1D1Q86TI0 1168 aaPredicted RBP13.27□□□□□ -0.28
CPNE1-225ENST00000483495 APCDD1Q8J025 514 aa13.27□□□□□ -0.28
CPNE1-225ENST00000483495 LPCAT1Q8NF37 534 aa13.27□□□□□ -0.28
CPNE1-225ENST00000483495 TTC8Q8TAM2 541 aa13.27□□□□□ -0.28
CPNE1-225ENST00000483495 SHKBP1Q8TBC3 707 aa13.27□□□□□ -0.28
CPNE1-225ENST00000483495 FAM45AQ8TCE6 357 aa13.27□□□□□ -0.28
CPNE1-225ENST00000483495 HEXDCQ8WVB3 486 aa13.27□□□□□ -0.28
CPNE1-225ENST00000483495 POF1BQ8WVV4 589 aa13.27□□□□□ -0.28
CPNE1-225ENST00000483495 SLC7A6OSQ96CW6 309 aaPredicted RBP13.27□□□□□ -0.28
CPNE1-225ENST00000483495 LMLNQ96KR4 655 aa13.27□□□□□ -0.28
CPNE1-225ENST00000483495 GATA5Q9BWX5 397 aaPredicted RBP13.27□□□□□ -0.28
CPNE1-225ENST00000483495 TLR9Q9NR96 1032 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms