RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 FUCA2Q9BTY2 467 aa12.9□□□□□ -0.34
TMEM54-206ENST00000482771 TMEM168Q9H0V1 697 aa12.9□□□□□ -0.34
TMEM54-206ENST00000482771 NDST4Q9H3R1 872 aa12.9□□□□□ -0.34
TMEM54-206ENST00000482771 RDH14Q9HBH5 336 aa12.9□□□□□ -0.34
TMEM54-206ENST00000482771 AKAP7Q9P0M2 348 aaPredicted RBP12.9□□□□□ -0.34
TMEM54-206ENST00000482771 MOSPD1Q9UJG1 213 aa12.9□□□□□ -0.34
TMEM54-206ENST00000482771 NEU3Q9UQ49 428 aa12.9□□□□□ -0.34
TMEM54-206ENST00000482771 FHOD1Q9Y613 1164 aa12.9□□□□□ -0.34
TMEM54-206ENST00000482771 C2CD4BA6NLJ0 364 aa12.89□□□□□ -0.35
TMEM54-206ENST00000482771 RASA4BC9J798 803 aa12.89□□□□□ -0.35
TMEM54-206ENST00000482771 CACNB4O00305 520 aaPredicted RBP12.89□□□□□ -0.35
TMEM54-206ENST00000482771 RASA4O43374 803 aa12.89□□□□□ -0.35
TMEM54-206ENST00000482771 NUDT21O43809 227 aaKnown RBP12.89□□□□□ -0.35
TMEM54-206ENST00000482771 PRKCSHP14314 528 aaPredicted RBP12.89□□□□□ -0.35
TMEM54-206ENST00000482771 EPHB2P29323 1055 aa12.89□□□□□ -0.35
TMEM54-206ENST00000482771 ALDH4A1P30038 563 aa12.89□□□□□ -0.35
TMEM54-206ENST00000482771 HDAC4P56524 1084 aa12.89□□□□□ -0.35
TMEM54-206ENST00000482771 SERINC3Q13530 473 aa12.89□□□□□ -0.35
TMEM54-206ENST00000482771 UBAP2LQ14157 1087 aaKnown RBP12.89□□□□□ -0.35
TMEM54-206ENST00000482771 AGERQ15109 404 aa12.89□□□□□ -0.35
TMEM54-206ENST00000482771 CAMK4Q16566 473 aa12.89□□□□□ -0.35
TMEM54-206ENST00000482771 VWA3BQ502W6 1294 aa12.89□□□□□ -0.35
TMEM54-206ENST00000482771 SPECC1LQ69YQ0 1117 aa12.89□□□□□ -0.35
TMEM54-206ENST00000482771 STRADAQ7RTN6 431 aa12.89□□□□□ -0.35
TMEM54-206ENST00000482771 CAMK1DQ8IU85 385 aa12.89□□□□□ -0.35
TMEM54-206ENST00000482771 PYROXD2Q8N2H3 581 aa12.89□□□□□ -0.35
TMEM54-206ENST00000482771 RTL3Q8N8U3 475 aaKnown RBP12.89□□□□□ -0.35
TMEM54-206ENST00000482771 SLC30A5Q8TAD4 765 aa12.89□□□□□ -0.35
TMEM54-206ENST00000482771 CENPIQ92674 756 aaPredicted RBP12.89□□□□□ -0.35
TMEM54-206ENST00000482771 ZNF641Q96N77 438 aaPredicted RBP12.89□□□□□ -0.35
TMEM54-206ENST00000482771 SLC12A9Q9BXP2 914 aa12.89□□□□□ -0.35
TMEM54-206ENST00000482771 B3GNT4Q9C0J1 378 aa12.89□□□□□ -0.35
TMEM54-206ENST00000482771 CYP4F12Q9HCS2 524 aa12.89□□□□□ -0.35
TMEM54-206ENST00000482771 FGF22Q9HCT0 170 aa12.89□□□□□ -0.35
TMEM54-206ENST00000482771 KIAA1468Q9P260 1216 aa12.89□□□□□ -0.35
TMEM54-206ENST00000482771 ANKMY1Q9P2S6 941 aa12.89□□□□□ -0.35
TMEM54-206ENST00000482771 LHX3Q9UBR4 397 aa12.89□□□□□ -0.35
TMEM54-206ENST00000482771 ARHGEF17Q96PE2 2063 aaPredicted RBP12.89□□□□□ -0.35
TMEM54-206ENST00000482771 TSPAN11A1L157 253 aa12.88□□□□□ -0.35
TMEM54-206ENST00000482771 TNFRSF10CO14798 259 aa12.88□□□□□ -0.35
TMEM54-206ENST00000482771 RECQL5O94762 991 aaPredicted RBP12.88□□□□□ -0.35
TMEM54-206ENST00000482771 CPNE6O95741 557 aa12.88□□□□□ -0.35
TMEM54-206ENST00000482771 MMP8P22894 467 aa12.88□□□□□ -0.35
TMEM54-206ENST00000482771 PTPN9P43378 593 aa12.88□□□□□ -0.35
TMEM54-206ENST00000482771 YBEYP58557 167 aaPredicted RBP12.88□□□□□ -0.35
TMEM54-206ENST00000482771 GRM3Q14832 879 aa12.88□□□□□ -0.35
TMEM54-206ENST00000482771 IGFBP7Q16270 282 aa12.88□□□□□ -0.35
TMEM54-206ENST00000482771 SKIDA1Q1XH10 827 aa12.88□□□□□ -0.35
TMEM54-206ENST00000482771 MAP9Q49MG5 647 aa12.88□□□□□ -0.35
TMEM54-206ENST00000482771 CFAP58Q5T655 872 aa12.88□□□□□ -0.35
TMEM54-206ENST00000482771 BORAQ6PGQ7 559 aa12.88□□□□□ -0.35
TMEM54-206ENST00000482771 BRAT1Q6PJG6 821 aa12.88□□□□□ -0.35
TMEM54-206ENST00000482771 SLFN11Q7Z7L1 901 aa12.88□□□□□ -0.35
TMEM54-206ENST00000482771 ZSWIM9Q86XI8 627 aa12.88□□□□□ -0.35
TMEM54-206ENST00000482771 DNAAF5Q86Y56 855 aa12.88□□□□□ -0.35
TMEM54-206ENST00000482771 RCBTB1Q8NDN9 531 aa12.88□□□□□ -0.35
TMEM54-206ENST00000482771 FAM172AQ8WUF8 416 aa12.88□□□□□ -0.35
TMEM54-206ENST00000482771 NKD1Q969G9 470 aa12.88□□□□□ -0.35
TMEM54-206ENST00000482771 TAAR9Q96RI9 348 aa12.88□□□□□ -0.35
TMEM54-206ENST00000482771 LGR4Q9BXB1 951 aa12.88□□□□□ -0.35
TMEM54-206ENST00000482771 NAA15Q9BXJ9 866 aaKnown RBP12.88□□□□□ -0.35
TMEM54-206ENST00000482771 STK33Q9BYT3 514 aa12.88□□□□□ -0.35
TMEM54-206ENST00000482771 ADNPQ9H2P0 1102 aa12.88□□□□□ -0.35
TMEM54-206ENST00000482771 SPATS2LQ9NUQ6 558 aaKnown RBP12.88□□□□□ -0.35
TMEM54-206ENST00000482771 UBA2Q9UBT2 640 aaPredicted RBP12.88□□□□□ -0.35
TMEM54-206ENST00000482771 ATP8A1Q9Y2Q0 1164 aa12.88□□□□□ -0.35
TMEM54-206ENST00000482771 BSNQ9UPA5 3926 aa12.88□□□□□ -0.35
TMEM54-206ENST00000482771 CHD5Q8TDI0 1954 aa12.88□□□□□ -0.35
TMEM54-206ENST00000482771 USP9YO00507 2555 aaPredicted RBP12.87□□□□□ -0.35
TMEM54-206ENST00000482771 SCN8AQ9UQD0 1980 aa12.87□□□□□ -0.35
TMEM54-206ENST00000482771 RHPN2P1A8MT19 583 aa12.87□□□□□ -0.35
TMEM54-206ENST00000482771 A8MX80 341 aa12.87□□□□□ -0.35
TMEM54-206ENST00000482771 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.87□□□□□ -0.35
TMEM54-206ENST00000482771 STMND1H3BQB6 276 aa12.87□□□□□ -0.35
TMEM54-206ENST00000482771 PES1O00541 588 aaKnown RBP12.87□□□□□ -0.35
TMEM54-206ENST00000482771 TEX33O43247 280 aa12.87□□□□□ -0.35
TMEM54-206ENST00000482771 CREB3O43889 395 aa12.87□□□□□ -0.35
TMEM54-206ENST00000482771 FGF1P05230 155 aa12.87□□□□□ -0.35
TMEM54-206ENST00000482771 HOXC4P09017 264 aaPredicted RBP12.87□□□□□ -0.35
TMEM54-206ENST00000482771 FGF3P11487 239 aaPredicted RBP12.87□□□□□ -0.35
TMEM54-206ENST00000482771 KRT3P12035 628 aa12.87□□□□□ -0.35
TMEM54-206ENST00000482771 UCHL3P15374 230 aa12.87□□□□□ -0.35
TMEM54-206ENST00000482771 KELP23276 732 aa12.87□□□□□ -0.35
TMEM54-206ENST00000482771 RFC1P35251 1148 aaPredicted RBP12.87□□□□□ -0.35
TMEM54-206ENST00000482771 TRIM23P36406 574 aa12.87□□□□□ -0.35
TMEM54-206ENST00000482771 MMP12P39900 470 aa12.87□□□□□ -0.35
TMEM54-206ENST00000482771 ATP1A2P50993 1020 aa12.87□□□□□ -0.35
TMEM54-206ENST00000482771 MAZP56270 477 aaKnown RBP12.87□□□□□ -0.35
TMEM54-206ENST00000482771 KIAA1024LP59773 190 aa12.87□□□□□ -0.35
TMEM54-206ENST00000482771 PARP15Q460N3 678 aa12.87□□□□□ -0.35
TMEM54-206ENST00000482771 HSP90AA4PQ58FG1 418 aa12.87□□□□□ -0.35
TMEM54-206ENST00000482771 EFHC2Q5JST6 749 aa12.87□□□□□ -0.35
TMEM54-206ENST00000482771 MIIPQ5JXC2 388 aa12.87□□□□□ -0.35
TMEM54-206ENST00000482771 SCYL2Q6P3W7 929 aa12.87□□□□□ -0.35
TMEM54-206ENST00000482771 ZNF564Q8TBZ8 553 aaPredicted RBP12.87□□□□□ -0.35
TMEM54-206ENST00000482771 SLC20A1Q8WUM9 679 aa12.87□□□□□ -0.35
TMEM54-206ENST00000482771 NTAN1Q96AB6 310 aa12.87□□□□□ -0.35
TMEM54-206ENST00000482771 NUDT22Q9BRQ3 303 aa12.87□□□□□ -0.35
TMEM54-206ENST00000482771 C11orf70Q9BRQ4 267 aa12.87□□□□□ -0.35
TMEM54-206ENST00000482771 TUBGCP2Q9BSJ2 902 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms