RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 VIPR1P32241 457 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 ID4P47928 161 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 EPHB1P54762 984 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 NXPH1P58417 271 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 EIF3EP60228 445 aaKnown RBP16.67■□□□□ 0.26
HMGN1-214ENST00000482733 SKOR1P84550 965 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 WASHC5Q12768 1159 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 RALGDSQ12967 914 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 KLF1Q13351 362 aaPredicted RBP16.67■□□□□ 0.26
HMGN1-214ENST00000482733 AGERQ15109 404 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 ZNF423Q2M1K9 1284 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 LAYNQ6UX15 382 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 KYAT3Q6YP21 454 aaKnown RBP16.67■□□□□ 0.26
HMGN1-214ENST00000482733 B4GALNT4Q76KP1 1039 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 ABI3BPQ7Z7G0 1075 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 OXR1Q8N573 874 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.67■□□□□ 0.26
HMGN1-214ENST00000482733 PIH1D2Q8WWB5 315 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 SCRN2Q96FV2 425 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 IMP4Q96G21 291 aaKnown RBP16.67■□□□□ 0.26
HMGN1-214ENST00000482733 MCCC1Q96RQ3 725 aaPredicted RBP16.67■□□□□ 0.26
HMGN1-214ENST00000482733 CEP41Q9BYV8 373 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 ERVMER34-1Q9H9K5 563 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 PCDH9Q9HC56 1237 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 FZD3Q9NPG1 666 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 KCTD5Q9NXV2 234 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 KLHL8Q9P2G9 620 aaPredicted RBP16.67■□□□□ 0.26
HMGN1-214ENST00000482733 B4GALT6Q9UBX8 382 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 DNPEPQ9ULA0 475 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 LAMA1P25391 3075 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 RALGAPA1Q6GYQ0 2036 aa16.67■□□□□ 0.26
HMGN1-214ENST00000482733 TOR1BO14657 336 aa16.66■□□□□ 0.26
HMGN1-214ENST00000482733 YKT6O15498 198 aa16.66■□□□□ 0.26
HMGN1-214ENST00000482733 STK10O94804 968 aaKnown RBP16.66■□□□□ 0.26
HMGN1-214ENST00000482733 MMP2P08253 660 aa16.66■□□□□ 0.26
HMGN1-214ENST00000482733 ELFN1P0C7U0 828 aa16.66■□□□□ 0.26
HMGN1-214ENST00000482733 THEGLP0DJG4 465 aa16.66■□□□□ 0.26
HMGN1-214ENST00000482733 RBP3P10745 1247 aa16.66■□□□□ 0.26
HMGN1-214ENST00000482733 RBL1P28749 1068 aa16.66■□□□□ 0.26
HMGN1-214ENST00000482733 RABIFP47224 123 aa16.66■□□□□ 0.26
HMGN1-214ENST00000482733 UAP1L1Q3KQV9 507 aa16.66■□□□□ 0.26
HMGN1-214ENST00000482733 DARS2Q6PI48 645 aaKnown RBP16.66■□□□□ 0.26
HMGN1-214ENST00000482733 LIPIQ6XZB0 460 aa16.66■□□□□ 0.26
HMGN1-214ENST00000482733 GCNT7Q6ZNI0 430 aa16.66■□□□□ 0.26
HMGN1-214ENST00000482733 CENPTQ96BT3 561 aa16.66■□□□□ 0.26
HMGN1-214ENST00000482733 KLF6Q99612 283 aaPredicted RBP16.66■□□□□ 0.26
HMGN1-214ENST00000482733 MYOCQ99972 504 aa16.66■□□□□ 0.26
HMGN1-214ENST00000482733 ADGRE3Q9BY15 652 aa16.66■□□□□ 0.26
HMGN1-214ENST00000482733 FRMD8P1Q9BZ68 369 aaPredicted RBP16.66■□□□□ 0.26
HMGN1-214ENST00000482733 CHKBQ9Y259 395 aa16.66■□□□□ 0.26
HMGN1-214ENST00000482733 CA5BQ9Y2D0 317 aa16.66■□□□□ 0.26
HMGN1-214ENST00000482733 A0A0J9YYE9 177 aa16.65■□□□□ 0.26
HMGN1-214ENST00000482733 PSMD11O00231 422 aa16.65■□□□□ 0.26
HMGN1-214ENST00000482733 KCNK3O14649 394 aa16.65■□□□□ 0.26
HMGN1-214ENST00000482733 RAD51BO15315 384 aa16.65■□□□□ 0.26
HMGN1-214ENST00000482733 TRBC1P01850 177 aa16.65■□□□□ 0.26
HMGN1-214ENST00000482733 PDHA1P08559 390 aa16.65■□□□□ 0.26
HMGN1-214ENST00000482733 MSNP26038 577 aaKnown RBP16.65■□□□□ 0.26
HMGN1-214ENST00000482733 CCT8P50990 548 aa16.65■□□□□ 0.26
HMGN1-214ENST00000482733 CLDN2P57739 230 aa16.65■□□□□ 0.26
HMGN1-214ENST00000482733 CCDC173Q0VFZ6 552 aa16.65■□□□□ 0.26
HMGN1-214ENST00000482733 ARHGEF7Q14155 803 aa16.65■□□□□ 0.26
HMGN1-214ENST00000482733 IHHQ14623 411 aa16.65■□□□□ 0.26
HMGN1-214ENST00000482733 LRRC14Q15048 493 aa16.65■□□□□ 0.26
HMGN1-214ENST00000482733 ITPRIPL1Q6GPH6 555 aa16.65■□□□□ 0.26
HMGN1-214ENST00000482733 PID1Q7Z2X4 250 aa16.65■□□□□ 0.26
HMGN1-214ENST00000482733 ZNF567Q8N184 647 aa16.65■□□□□ 0.26
HMGN1-214ENST00000482733 TADA1Q96BN2 335 aa16.65■□□□□ 0.26
HMGN1-214ENST00000482733 BMFQ96LC9 184 aa16.65■□□□□ 0.26
HMGN1-214ENST00000482733 FCRL5Q96RD9 977 aa16.65■□□□□ 0.26
HMGN1-214ENST00000482733 RBM15Q96T37 977 aaKnown RBP eCLIP16.65■□□□□ 0.26
HMGN1-214ENST00000482733 ELF4Q99607 663 aaPredicted RBP16.65■□□□□ 0.26
HMGN1-214ENST00000482733 PCDHGB2Q9Y5G2 931 aa16.65■□□□□ 0.26
HMGN1-214ENST00000482733 PCDH15Q96QU1 1955 aa16.65■□□□□ 0.26
HMGN1-214ENST00000482733 DMXL1Q9Y485 3027 aa16.65■□□□□ 0.26
HMGN1-214ENST00000482733 TM4SF5O14894 197 aa16.64■□□□□ 0.25
HMGN1-214ENST00000482733 HEXIM1O94992 359 aaKnown RBP16.64■□□□□ 0.25
HMGN1-214ENST00000482733 PRLP01236 227 aa16.64■□□□□ 0.25
HMGN1-214ENST00000482733 ZNF30P17039 623 aa16.64■□□□□ 0.25
HMGN1-214ENST00000482733 CD68P34810 354 aaPredicted RBP16.64■□□□□ 0.25
HMGN1-214ENST00000482733 ARRB1P49407 418 aaPredicted RBP16.64■□□□□ 0.25
HMGN1-214ENST00000482733 YPEL5P62699 121 aa16.64■□□□□ 0.25
HMGN1-214ENST00000482733 SEMG2Q02383 582 aa16.64■□□□□ 0.25
HMGN1-214ENST00000482733 SUZ12Q15022 739 aaKnown RBP16.64■□□□□ 0.25
HMGN1-214ENST00000482733 CCDC70Q6NSX1 233 aa16.64■□□□□ 0.25
HMGN1-214ENST00000482733 Q6ZSR6 202 aa16.64■□□□□ 0.25
HMGN1-214ENST00000482733 PTAR1Q7Z6K3 402 aaPredicted RBP16.64■□□□□ 0.25
HMGN1-214ENST00000482733 SLC13A5Q86YT5 568 aaPredicted RBP16.64■□□□□ 0.25
HMGN1-214ENST00000482733 REXO1L1PQ8IX06 675 aa16.64■□□□□ 0.25
HMGN1-214ENST00000482733 TP53I13Q8NBR0 393 aaPredicted RBP16.64■□□□□ 0.25
HMGN1-214ENST00000482733 LPCAT1Q8NF37 534 aa16.64■□□□□ 0.25
HMGN1-214ENST00000482733 OR2I1PQ8NGU4 316 aa16.64■□□□□ 0.25
HMGN1-214ENST00000482733 IFT43Q96FT9 208 aa16.64■□□□□ 0.25
HMGN1-214ENST00000482733 LYSMD1Q96S90 227 aa16.64■□□□□ 0.25
HMGN1-214ENST00000482733 TLR10Q9BXR5 811 aa16.64■□□□□ 0.25
HMGN1-214ENST00000482733 TM7SF3Q9NS93 570 aa16.64■□□□□ 0.25
HMGN1-214ENST00000482733 FAM153AQ9UHL3 310 aa16.64■□□□□ 0.25
HMGN1-214ENST00000482733 FNDC3AQ9Y2H6 1198 aaKnown RBP16.64■□□□□ 0.25
HMGN1-214ENST00000482733 JRKLQ9Y4A0 524 aa16.64■□□□□ 0.25
HMGN1-214ENST00000482733 A0A1B0GTQ1 180 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms