RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 MLLT6P55198 1093 aaPredicted RBP9.19□□□□□ -0.94
CALD1-220ENST00000482470 RPS24P62847 133 aaKnown RBP9.19□□□□□ -0.94
CALD1-220ENST00000482470 LBRQ14739 615 aaKnown RBP9.19□□□□□ -0.94
CALD1-220ENST00000482470 SLC22A9Q8IVM8 553 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 TTC9BQ8N6N2 239 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 RP9Q8TA86 221 aaKnown RBP9.19□□□□□ -0.94
CALD1-220ENST00000482470 ANKRD27Q96NW4 1050 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 FCRL5Q96RD9 977 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 C1orf50Q9BV19 199 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 PCDHAC1Q9H158 963 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 EBF3Q9H4W6 596 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 EMCNQ9ULC0 261 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 RAD54BQ9Y620 910 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 NUMBLQ9Y6R0 609 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 SCN1AP35498 2009 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 ZCWPW2A0A1B0GU75 182 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 INPP4BO15327 924 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 ITGAXP20702 1163 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 GRIA3P42263 894 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 CLCN5P51795 746 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 ANKS6Q68DC2 871 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 ZBTB49Q6ZSB9 765 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 TPGS1Q6ZTW0 290 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 TMEM135Q86UB9 458 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 CEP97Q8IW35 865 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 IRGQQ8WZA9 623 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 TRIB2Q92519 343 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 FAR2Q96K12 515 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 ACOX2Q99424 681 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 SLC39A3Q9BRY0 314 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 CCDC106Q9BWC9 280 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 SLC25A51Q9H1U9 297 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 STN1Q9H668 368 aaKnown RBP9.19□□□□□ -0.94
CALD1-220ENST00000482470 CCSER2Q9H7U1 834 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 GKN1Q9NS71 199 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 GIMAP2Q9UG22 337 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 LTBP1Q14766 1721 aa9.19□□□□□ -0.94
CALD1-220ENST00000482470 ZBTB14O43829 449 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 E2F6O75461 281 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 HGFP14210 728 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 AQP4P55087 323 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 ESRRGP62508 458 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 SEMG2Q02383 582 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 CDC16Q13042 620 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 TSTD2Q5T7W7 516 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 ANGPTL8Q6UXH0 198 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 ALKAL1Q6UXT8 129 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 OR9I1Q8NGQ6 314 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 ZBTB18Q99592 522 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 SYTL2Q9HCH5 934 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 CLIC5Q9NZA1 410 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 SEPT3Q9UH03 358 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 CRLS1Q9UJA2 301 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 PCDHB9Q9Y5E1 797 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 TLL2Q9Y6L7 1015 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 KNL1Q8NG31 2342 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 UBXN8O00124 270 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 MGEA5O60502 916 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 XRCC1P18887 633 aaPredicted RBP9.18□□□□□ -0.94
CALD1-220ENST00000482470 WEE1P30291 646 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 SLC7A2P52569 658 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 THOP1P52888 689 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 HNRNPDQ14103 355 aaKnown RBP9.18□□□□□ -0.94
CALD1-220ENST00000482470 LPIN1Q14693 890 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 ZNF789Q5FWF6 425 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 CDYL2Q8N8U2 506 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 KLHL23Q8NBE8 558 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 BTN2A3PQ96KV6 586 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 TSPAN18Q96SJ8 248 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 CCT7Q99832 543 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 RTKNQ9BST9 563 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.18□□□□□ -0.94
CALD1-220ENST00000482470 CORO1CQ9ULV4 474 aaPredicted RBP9.18□□□□□ -0.94
CALD1-220ENST00000482470 GABRDO14764 452 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 CLPTM1O96005 669 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 GOT2P00505 430 aaKnown RBP9.18□□□□□ -0.94
CALD1-220ENST00000482470 ATP5BP06576 529 aaKnown RBP9.18□□□□□ -0.94
CALD1-220ENST00000482470 SNRPB2P08579 225 aaKnown RBP9.18□□□□□ -0.94
CALD1-220ENST00000482470 RHOQP17081 205 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 SP3Q02447 781 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 CAPRIN1Q14444 709 aaKnown RBP9.18□□□□□ -0.94
CALD1-220ENST00000482470 NR6A1Q15406 480 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 FNDC5Q8NAU1 212 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 OR4L1Q8NH43 312 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 ERLEC1Q96DZ1 483 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 HAPLN3Q96S86 360 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 GPR22Q99680 433 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 ZBED2Q9BTP6 218 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 HGH1Q9BTY7 390 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 TRIM15Q9C019 465 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 DRC3Q9H069 523 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 SLC45A1Q9Y2W3 748 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 NDUFAF1Q9Y375 327 aa9.18□□□□□ -0.94
CALD1-220ENST00000482470 TRAFD1O14545 582 aaPredicted RBP9.17□□□□□ -0.94
CALD1-220ENST00000482470 RTN3O95197 1032 aaPredicted RBP9.17□□□□□ -0.94
CALD1-220ENST00000482470 AOC1P19801 751 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 TPP2P29144 1249 aaPredicted RBP9.17□□□□□ -0.94
CALD1-220ENST00000482470 AKT1P31749 480 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 PIK3CGP48736 1102 aa9.17□□□□□ -0.94
CALD1-220ENST00000482470 HCAR3P49019 387 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms