RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 FAM90A2PQ658T7 463 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 TMEM200BQ69YZ2 307 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 PDSS2Q86YH6 399 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 ZNF595Q8IYB9 648 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 UNC5BQ8IZJ1 945 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 SIX6OS1Q8N1H7 587 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 STPG3Q8N7X2 389 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 OR6C4Q8NGE1 309 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 BRSK1Q8TDC3 778 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 KLHL29Q96CT2 875 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 WDYHV1Q96HA8 205 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 WDR92Q96MX6 357 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 IDI2Q9BXS1 227 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 HDHD5Q9BXW7 423 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 GOLPH3LQ9H4A5 285 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 SMARCAD1Q9H4L7 1026 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 TCP11L1Q9NUJ3 509 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 PTBP2Q9UKA9 531 aaKnown RBP3.4□□□□□ -1.86
SMC6-208ENST00000481708 SORCS3Q9UPU3 1222 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 MYH15Q9Y2K3 1946 aa3.4□□□□□ -1.86
SMC6-208ENST00000481708 SYNJ2BP-COX16A0A087WUM0 186 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 CDRT15L2A8MXV6 281 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 UBXN8O00124 270 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 PPEF2O14830 753 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 ST8SIA3O43173 380 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 CELF2O95319 508 aaKnown RBP3.4□□□□□ -1.87
SMC6-208ENST00000481708 MMP2P08253 660 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 HNF1BP35680 557 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 EPS15P42566 896 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 PTGER3P43115 390 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 ATP5OP48047 213 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 ADAM17P78536 824 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 MTX1Q13505 466 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 THOC5Q13769 683 aaKnown RBP3.4□□□□□ -1.87
SMC6-208ENST00000481708 PTK6Q13882 451 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 LY6KQ17RY6 165 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 C2orf76Q3KRA6 126 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 CES4AQ5XG92 561 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 DENND1BQ6P3S1 775 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 PET117Q6UWS5 81 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 MAMDC4Q6UXC1 1216 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 GPRIN1Q7Z2K8 1008 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 DTX3Q8N9I9 347 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 BEND2Q8NDZ0 799 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 GMCL1P1Q8NEA9 526 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 NEK11Q8NG66 645 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 IGDCC4Q8TDY8 1250 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 SLC13A3Q8WWT9 602 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 HAPLN3Q96S86 360 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 KAT14Q9H8E8 782 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 SPATA6Q9NWH7 488 aaPredicted RBP3.4□□□□□ -1.87
SMC6-208ENST00000481708 CPSF2Q9P2I0 782 aaKnown RBP3.4□□□□□ -1.87
SMC6-208ENST00000481708 SEC63Q9UGP8 760 aaKnown RBP3.4□□□□□ -1.87
SMC6-208ENST00000481708 USP16Q9Y5T5 823 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 TRBC2A0A5B9 178 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 CXorf49A8MYA2 514 aaPredicted RBP3.4□□□□□ -1.87
SMC6-208ENST00000481708 FAM25EA8MYX2 175 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 ALDH1A2O94788 518 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 TRIM16O95361 564 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 HPXP02790 462 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 FAM58BPP0C7Q3 252 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 LINC00271P0C7V0 271 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 EEF2P13639 858 aaKnown RBP3.4□□□□□ -1.87
SMC6-208ENST00000481708 FDPSP14324 419 aaKnown RBP3.4□□□□□ -1.87
SMC6-208ENST00000481708 FBLN1P23142 703 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 ITPKBP27987 946 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 ADORA2AP29274 412 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 VIPR2P41587 438 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 DIO1P49895 249 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 CLCN3P51790 818 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 RNASELQ05823 741 aaKnown RBP3.4□□□□□ -1.87
SMC6-208ENST00000481708 DLG2Q15700 870 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 AAK1Q2M2I8 961 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 LETM2Q2VYF4 491 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 LBHQ53QV2 105 aaPredicted RBP3.4□□□□□ -1.87
SMC6-208ENST00000481708 PMS2CLQ68D20 193 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 OTUD7BQ6GQQ9 843 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 JADE1Q6IE81 842 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 GALNT18Q6P9A2 607 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 TMCO5AQ8N6Q1 288 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 C11orf44Q8N8P7 122 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 RTL3Q8N8U3 475 aaKnown RBP3.4□□□□□ -1.87
SMC6-208ENST00000481708 ZCCHC10Q8TBK6 192 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 LRRC8CQ8TDW0 803 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 ZNF653Q96CK0 615 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 PPP1R10Q96QC0 940 aaKnown RBP3.4□□□□□ -1.87
SMC6-208ENST00000481708 RNF32Q9H0A6 362 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 TNFRSF12AQ9NP84 129 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 MBNL1Q9NR56 388 aaKnown RBP3.4□□□□□ -1.87
SMC6-208ENST00000481708 MBNL3Q9NUK0 354 aaKnown RBP3.4□□□□□ -1.87
SMC6-208ENST00000481708 PAG1Q9NWQ8 432 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 IL19Q9UHD0 177 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 PLAGL1Q9UM63 463 aa3.4□□□□□ -1.87
SMC6-208ENST00000481708 FITM1A5D6W6 292 aa3.39□□□□□ -1.87
SMC6-208ENST00000481708 NPIPB13A6NJU9 1138 aa3.39□□□□□ -1.87
SMC6-208ENST00000481708 NPIPB5A8MRT5 1133 aa3.39□□□□□ -1.87
SMC6-208ENST00000481708 KIAA1324LA8MWY0 1029 aaPredicted RBP3.39□□□□□ -1.87
SMC6-208ENST00000481708 NPIPB4C9JG80 1138 aa3.39□□□□□ -1.87
SMC6-208ENST00000481708 GCOM1H8Y6P7 765 aaPredicted RBP3.39□□□□□ -1.87
SMC6-208ENST00000481708 CCNDBP1O95273 360 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms