RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 DPYSQ14117 519 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 ZNF235Q14590 738 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 ELOCQ15369 112 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 SMTNL2Q2TAL5 461 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 ERMARDQ5T6L9 678 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 ARHGAP40Q5TG30 622 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 TMCO4Q5TGY1 634 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 AFMIDQ63HM1 303 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 PPP1R2P3Q6NXS1 205 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 CYP4V2Q6ZWL3 525 aaPredicted RBP6.72□□□□□ -1.33
FN1-220ENST00000480024 GPR155Q7Z3F1 870 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 ZNF571Q7Z3V5 609 aaPredicted RBP6.72□□□□□ -1.33
FN1-220ENST00000480024 B3GNT8Q7Z7M8 397 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 SRLQ86TD4 932 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 GKN2Q86XP6 184 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 TP53INP2Q8IXH6 220 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 SDR16C5Q8N3Y7 309 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 FSTL5Q8N475 847 aaPredicted RBP6.72□□□□□ -1.33
FN1-220ENST00000480024 TPCN2Q8NHX9 752 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 SCG3Q8WXD2 468 aaKnown RBP6.72□□□□□ -1.33
FN1-220ENST00000480024 WDR92Q96MX6 357 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 ZNF641Q96N77 438 aaPredicted RBP6.72□□□□□ -1.33
FN1-220ENST00000480024 EIF3CQ99613 913 aaKnown RBP6.72□□□□□ -1.33
FN1-220ENST00000480024 APOOQ9BUR5 198 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 EDEM3Q9BZQ6 932 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 NAT10Q9H0A0 1025 aaKnown RBP6.72□□□□□ -1.33
FN1-220ENST00000480024 SUDS3Q9H7L9 328 aaPredicted RBP6.72□□□□□ -1.33
FN1-220ENST00000480024 CPNE5Q9HCH3 593 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 EPB41L5Q9HCM4 733 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 FGF22Q9HCT0 170 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 RTN4Q9NQC3 1192 aaKnown RBP6.72□□□□□ -1.33
FN1-220ENST00000480024 WDR70Q9NW82 654 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 DONSONQ9NYP3 566 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 TMEM63CQ9P1W3 806 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 RABGEF1Q9UJ41 708 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 MYO6Q9UM54 1294 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 GPR34Q9UPC5 381 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 SCINQ9Y6U3 715 aa6.72□□□□□ -1.33
FN1-220ENST00000480024 TENM4Q6N022 2769 aa6.71□□□□□ -1.33
FN1-220ENST00000480024 TLN1Q9Y490 2541 aaKnown RBP6.71□□□□□ -1.34
FN1-220ENST00000480024 CCDC187A0A096LP49 1063 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 TEX51A0A1B0GUA7 166 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 TMEM191CA6NGB0 347 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 TMEM110-MUSTN1A8MSY1 372 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 A8MX80 341 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 B4DGG1 531 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 D6RAR5 112 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 AGRPO00253 132 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 CACNB4O00305 520 aaPredicted RBP6.71□□□□□ -1.34
FN1-220ENST00000480024 DDX3XO00571 662 aaKnown RBP eCLIP6.71□□□□□ -1.34
FN1-220ENST00000480024 TNFSF15O95150 251 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 FTLP02792 175 aaPredicted RBP6.71□□□□□ -1.34
FN1-220ENST00000480024 SKILP12757 684 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 TCF4P15884 667 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 PEX5P50542 639 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 UCNP55089 124 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 KIAA1024LP59773 190 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 AP1S1P61966 158 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 IL10RBQ08334 325 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 KLHL30Q0D2K2 578 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 SLC10A7Q0GE19 358 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 C19orf57Q0VDD7 668 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 LBRQ14739 615 aaKnown RBP6.71□□□□□ -1.34
FN1-220ENST00000480024 ACOX1Q15067 660 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 FILIP1LQ4L180 1135 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 DENND2CQ68D51 928 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 CAVIN1Q6NZI2 390 aaKnown RBP6.71□□□□□ -1.34
FN1-220ENST00000480024 LIPIQ6XZB0 460 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 DPPA4Q7L190 304 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 SFTPA2Q8IWL1 248 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 PELI3Q8N2H9 469 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 OR56A4Q8NGH8 313 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 ATL2Q8NHH9 583 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 WDR36Q8NI36 951 aaKnown RBP6.71□□□□□ -1.34
FN1-220ENST00000480024 HCAR2Q8TDS4 363 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 FNIP1Q8TF40 1166 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 PDCD6IPQ8WUM4 868 aaKnown RBP6.71□□□□□ -1.34
FN1-220ENST00000480024 OR1E3Q8WZA6 343 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 HSPH1Q92598 858 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 ECHDC3Q96DC8 303 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 NUS1Q96E22 293 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 TRIM11Q96F44 468 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 GFM1Q96RP9 751 aaKnown RBP6.71□□□□□ -1.34
FN1-220ENST00000480024 FOXP3Q9BZS1 431 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 WDR26Q9H7D7 661 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 ZWILCHQ9H900 591 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 MRPL40Q9NQ50 206 aaKnown RBP6.71□□□□□ -1.34
FN1-220ENST00000480024 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.71□□□□□ -1.34
FN1-220ENST00000480024 CWC15Q9P013 229 aaKnown RBP6.71□□□□□ -1.34
FN1-220ENST00000480024 SEPT3Q9UH03 358 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 MOSPD1Q9UJG1 213 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 SCN8AQ9UQD0 1980 aa6.71□□□□□ -1.34
FN1-220ENST00000480024 ZFC3H1O60293 1989 aaKnown RBP6.7□□□□□ -1.34
FN1-220ENST00000480024 A0A1B0GTH6 734 aa6.7□□□□□ -1.34
FN1-220ENST00000480024 A0A1W2PQC6 194 aa6.7□□□□□ -1.34
FN1-220ENST00000480024 A0A1W2PQM1 296 aa6.7□□□□□ -1.34
FN1-220ENST00000480024 GOLGA6CA6NDK9 693 aa6.7□□□□□ -1.34
FN1-220ENST00000480024 GOLGA6BA6NDN3 693 aa6.7□□□□□ -1.34
FN1-220ENST00000480024 TMEM202A6NGA9 273 aa6.7□□□□□ -1.34
FN1-220ENST00000480024 SMTNL1A8MU46 457 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms