RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 SLX1AQ9BQ83 275 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 COLEC11Q9BWP8 271 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 TRIM8Q9BZR9 551 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 TKTL2Q9H0I9 626 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 IL1RL2Q9HB29 575 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 SPON1Q9HCB6 807 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 MID2Q9UJV3 735 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 ACOT9Q9Y305 439 aa13.39□□□□□ -0.27
PDZRN3-208ENST00000479530 HHLA1C9JL84 531 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 C9JVG2 144 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 F8W810 466 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 H3BMQ9 156 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 AURKAO14965 403 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 LRIG2O94898 1065 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 TSPAN8P19075 237 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 HK2P52789 917 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 MAPK10P53779 464 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 TGFBIQ15582 683 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 ZBED5Q49AG3 693 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 GPR107Q5VW38 600 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 TTC33Q6PID6 262 aaPredicted RBP13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 OFCC1Q8IZS5 231 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 FBXL20Q96IG2 436 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 COG8Q96MW5 612 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 SIK2Q9H0K1 926 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 OR12D3Q9UGF7 316 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 NUDT5Q9UKK9 219 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 AURKCQ9UQB9 309 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 TMEM221A6NGB7 291 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 HAS3O00219 553 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 MRASO14807 208 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 MT-CYBP00156 380 aaPredicted RBP13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 NME5P56597 212 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 TMEM26Q6ZUK4 368 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 RNF135Q8IUD6 432 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 SCAMP5Q8TAC9 235 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 HEXDCQ8WVB3 486 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 NPLQ9BXD5 320 aaPredicted RBP13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 DNAI2Q9GZS0 605 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 SOX17Q9H6I2 414 aaPredicted RBP13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 ARMC7Q9H6L4 198 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 RPF2Q9H7B2 306 aaKnown RBP13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 RMI1Q9H9A7 625 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 CXorf21Q9HAI6 301 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 PFDN4Q9NQP4 134 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 TMLHEQ9NVH6 421 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 TBCCD1Q9NVR7 557 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 TMEM181Q9P2C4 612 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 EGFL7Q9UHF1 273 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 SARDHQ9UL12 918 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 ANKRD6Q9Y2G4 727 aa13.38□□□□□ -0.27
PDZRN3-208ENST00000479530 UBDO15205 165 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 AXLP30530 894 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 LRPAP1P30533 357 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 CRYBB1P53674 252 aaPredicted RBP13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 STX5Q13190 355 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 POU6F1Q14863 301 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 CYHR1Q6ZMK1 362 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 RETREG3Q86VR2 466 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 DHFR2Q86XF0 187 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 ANKFN1Q8N957 763 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 TANKQ92844 425 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 CCDC97Q96F63 343 aaPredicted RBP13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 RTP3Q9BQQ7 232 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 SYT17Q9BSW7 474 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 YIPF2Q9BWQ6 316 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 VPS45Q9NRW7 570 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 NCKIPSDQ9NZQ3 722 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 SLC2A6Q9UGQ3 507 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 SCN4AP35499 1836 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 A0A087WXM4 84 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 KANSL1LA0AUZ9 987 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 TRPC5OSA6NMA1 111 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 YAP1P46937 504 aaKnown RBP13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 SCNN1GP51170 649 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 TAS2R39P59534 338 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 RAB10P61026 200 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 TNK2Q07912 1038 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 AARS2Q5JTZ9 985 aaKnown RBP13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 CLEC6AQ6EIG7 209 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 TBC1D15Q8TC07 691 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 TOP1MTQ969P6 601 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 SLC45A3Q96JT2 553 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 ADI1Q9BV57 179 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 GBA3Q9H227 469 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 HIPK3Q9H422 1215 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 WDCPQ9H6R7 721 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 NDFIP2Q9NV92 336 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 FAM95CA0A1B0GW59 222 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 TRIM64CA6NLI5 447 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 XPOTO43592 962 aaKnown RBP13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 SNRPB2P08579 225 aaKnown RBP13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 BMP2P12643 396 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 BDNFP23560 247 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 ARNTP27540 789 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 BRCC3P46736 316 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 ESRRGP62508 458 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 TRAP1Q12931 704 aaKnown RBP13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 BNIP3Q12983 259 aa13.37□□□□□ -0.27
PDZRN3-208ENST00000479530 FRG1Q14331 258 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms