RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 NTN3O00634 580 aaPredicted RBP6.73□□□□□ -1.33
VCP-205ENST00000479300 CHUKO15111 745 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 MUSKO15146 869 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 RAMP2O60895 175 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 ENDOD1O94919 500 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 CELA2BP08218 269 aaPredicted RBP6.73□□□□□ -1.33
VCP-205ENST00000479300 ALPPL2P10696 532 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 HGFP14210 728 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 RHOQP17081 205 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 TFE3P19532 575 aaPredicted RBP6.73□□□□□ -1.33
VCP-205ENST00000479300 XPAP23025 273 aaPredicted RBP6.73□□□□□ -1.33
VCP-205ENST00000479300 RRM1P23921 792 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 MCM3P25205 808 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 SLC5A2P31639 672 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 ADRA1BP35368 520 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 PTPN9P43378 593 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 KLK7P49862 253 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 NEK3P51956 506 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 JAM2P57087 298 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 SNRPD1P62314 119 aaKnown RBP6.73□□□□□ -1.33
VCP-205ENST00000479300 FMO1Q01740 532 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 SGCGQ13326 291 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 CRYMQ14894 314 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 CLCA4Q14CN2 919 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 ZKSCAN8Q15776 578 aaPredicted RBP6.73□□□□□ -1.33
VCP-205ENST00000479300 CLEC16AQ2KHT3 1053 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 C15orf59Q2T9L4 293 aaPredicted RBP6.73□□□□□ -1.33
VCP-205ENST00000479300 CARD16Q5EG05 197 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 OTUD1Q5VV17 481 aaPredicted RBP6.73□□□□□ -1.33
VCP-205ENST00000479300 ZCCHC8Q6NZY4 707 aaKnown RBP6.73□□□□□ -1.33
VCP-205ENST00000479300 CLEC18BQ6UXF7 455 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 LINGO4Q6UY18 593 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 KYAT3Q6YP21 454 aaKnown RBP6.73□□□□□ -1.33
VCP-205ENST00000479300 ERN2Q76MJ5 926 aaKnown RBP6.73□□□□□ -1.33
VCP-205ENST00000479300 PTAR1Q7Z6K3 402 aaPredicted RBP6.73□□□□□ -1.33
VCP-205ENST00000479300 SLFN11Q7Z7L1 901 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 DCP2Q8IU60 420 aaKnown RBP6.73□□□□□ -1.33
VCP-205ENST00000479300 CLEC18CQ8NCF0 446 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 OR7D4Q8NG98 312 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 WDR36Q8NI36 951 aaKnown RBP6.73□□□□□ -1.33
VCP-205ENST00000479300 GRIN3AQ8TCU5 1115 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 FAM172AQ8WUF8 416 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 MIEF2Q96C03 454 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 FEM1CQ96JP0 617 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 KCNK17Q96T54 332 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 HEPHQ9BQS7 1158 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 BOCQ9BWV1 1114 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 XPO4Q9C0E2 1151 aaKnown RBP6.73□□□□□ -1.33
VCP-205ENST00000479300 CLPBQ9H078 707 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 MAGEH1Q9H213 219 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 TNKS2Q9H2K2 1166 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 CATSPERBQ9H7T0 1116 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 ANLNQ9NQW6 1124 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 ANKMY1Q9P2S6 941 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 GGT7Q9UJ14 662 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 MCM8Q9UJA3 840 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 NOCTQ9UK39 431 aaKnown RBP6.73□□□□□ -1.33
VCP-205ENST00000479300 CSNK1G3Q9Y6M4 447 aa6.73□□□□□ -1.33
VCP-205ENST00000479300 SPENQ96T58 3664 aaKnown RBP6.72□□□□□ -1.33
VCP-205ENST00000479300 DOCK4Q8N1I0 1966 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 IGLV3-10A0A075B6K4 115 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 CCDC187A0A096LP49 1063 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 A0A0D9SEW6 157 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 CXorf51AA0A1B0GTR3 108 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 NEMP2A6NFY4 417 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 C2CD4BA6NLJ0 364 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 SIGLEC16A6NMB1 481 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 KRIT1O00522 736 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 EBAG9O00559 213 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 DAPK3O43293 454 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 AQP9O43315 295 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 BUB1O43683 1085 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 CREB3O43889 395 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 RNF8O76064 485 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 IGSF6O95976 241 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 PAK4O96013 591 aaPredicted RBP6.72□□□□□ -1.33
VCP-205ENST00000479300 SERPINC1P01008 464 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 ITGA2BP08514 1039 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 PLEKP08567 350 aaPredicted RBP6.72□□□□□ -1.33
VCP-205ENST00000479300 CHRNB2P17787 502 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 EPHB2P29323 1055 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 L1CAMP32004 1257 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 UGT1A5P35504 534 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 SERPINH1P50454 418 aaKnown RBP6.72□□□□□ -1.33
VCP-205ENST00000479300 AIF1P55008 147 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 HNRNPKP61978 463 aaKnown RBP eCLIP6.72□□□□□ -1.33
VCP-205ENST00000479300 RPS21P63220 83 aaKnown RBP6.72□□□□□ -1.33
VCP-205ENST00000479300 CYP4F2P78329 520 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 NRG1Q02297 640 aaPredicted RBP6.72□□□□□ -1.33
VCP-205ENST00000479300 TLE1Q04724 770 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 C1orf61Q13536 156 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 ASIC2Q16515 512 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 TBR1Q16650 682 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 CCDC14Q49A88 953 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 CFAP58Q5T655 872 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 KCTD16Q68DU8 428 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 ACAD10Q6JQN1 1059 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 KIAA1161Q6NSJ0 714 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 DPY19L2P1Q6NXN4 242 aa6.72□□□□□ -1.33
VCP-205ENST00000479300 ATG14Q6ZNE5 492 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms