RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 NXNL1Q96CM4 212 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 MYO19Q96H55 970 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 CCDC3Q9BQI4 270 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 NMUR2Q9GZQ4 415 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 CNTN3Q9P232 1028 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 TELO2Q9Y4R8 837 aa14.27□□□□□ -0.13
NPHP4-208ENST00000478423 NTRK1P04629 796 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 MPP1Q00013 466 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 TRIP4Q15650 581 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-208ENST00000478423 TJAP1Q5JTD0 557 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 MFSD4BQ5TF39 518 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 EFCAB3Q8N7B9 438 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 DNAJB14Q8TBM8 379 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 CXorf40AQ8TE69 158 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 OSCP1Q8WVF1 389 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 CRYGNQ8WXF5 182 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 C6orf203Q9P0P8 240 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-208ENST00000478423 LGALS13Q9UHV8 139 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 RPP40O75818 363 aaKnown RBP14.26□□□□□ -0.13
NPHP4-208ENST00000478423 THOP1P52888 689 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 CYP2A13Q16696 494 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 HECTD2Q5U5R9 776 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 ARL14EPQ8N8R7 260 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-208ENST00000478423 MAGEH1Q9H213 219 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 CACNA2D2Q9NY47 1150 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 HECAQ9UBI9 543 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-208ENST00000478423 ZNF180Q9UJW8 692 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 NCKAP1Q9Y2A7 1128 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 SETD1AO15047 1707 aaKnown RBP14.26□□□□□ -0.13
NPHP4-208ENST00000478423 NRP1O14786 923 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 KPNA5O15131 536 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 SLC25A14O95258 325 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-208ENST00000478423 KCNE1P15382 129 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 TLE2Q04725 743 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 ZBTB17Q13105 803 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 PRKG2Q13237 762 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 MPPE1Q53F39 396 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 CLNKQ7Z7G1 428 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 PTCD2Q8WV60 388 aaKnown RBP14.26□□□□□ -0.13
NPHP4-208ENST00000478423 ATL1Q8WXF7 558 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 TRMOQ9BU70 441 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 VPS51Q9UID3 782 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 INVSQ9Y283 1065 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 TRAF6Q9Y4K3 522 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 NUP98P52948 1817 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 KNL1Q8NG31 2342 aa14.26□□□□□ -0.13
NPHP4-208ENST00000478423 C1QTNF3-AMACRE9PGA6 284 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 PPP2R1BP30154 601 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 RRM2P31350 389 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 PSME3P61289 254 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 IRX1P78414 480 aaPredicted RBP14.25□□□□□ -0.13
NPHP4-208ENST00000478423 TCEA2Q15560 299 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 FSTL4Q6MZW2 842 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 HFE2Q6ZVN8 426 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 TDRPQ86YL5 185 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 DDX1Q92499 740 aaKnown RBP14.25□□□□□ -0.13
NPHP4-208ENST00000478423 NTAN1Q96AB6 310 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 RCN3Q96D15 328 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 FIZ1Q96SL8 496 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 C1QTNF7Q9BXJ2 289 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 SLC39A8Q9C0K1 460 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 HBS1LQ9Y450 684 aaKnown RBP14.25□□□□□ -0.13
NPHP4-208ENST00000478423 TCAF1Q9Y4C2 921 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 CPQQ9Y646 472 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 MPSTP25325 297 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 NMBRP28336 390 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 ALDH6A1Q02252 535 aaKnown RBP14.25□□□□□ -0.13
NPHP4-208ENST00000478423 BHLHE22Q8NFJ8 381 aaPredicted RBP14.25□□□□□ -0.13
NPHP4-208ENST00000478423 MAGEC3Q8TD91 643 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 EMID1Q96A84 441 aaPredicted RBP14.25□□□□□ -0.13
NPHP4-208ENST00000478423 REPS1Q96D71 796 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 C16orf70Q9BSU1 422 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 ABCG8Q9H221 673 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 SNX6Q9UNH7 406 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 SLC12A4Q9UP95 1085 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 MYH11P35749 1972 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 SCNN1AP37088 669 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 PAGE2BQ5JRK9 111 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 OLFML1Q6UWY5 402 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 TMEM132CQ8N3T6 1108 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 C1orf50Q9BV19 199 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 OXCT2Q9BYC2 517 aaPredicted RBP14.25□□□□□ -0.13
NPHP4-208ENST00000478423 RAD18Q9NS91 495 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 MSRAQ9UJ68 235 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 ZNF510Q9Y2H8 683 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 ZFP37Q9Y6Q3 630 aaPredicted RBP14.25□□□□□ -0.13
NPHP4-208ENST00000478423 C2orf71A6NGG8 1288 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 CLOCKO15516 846 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 MAP3K13O43283 966 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 OTCP00480 354 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 GSTM1P09488 218 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 COL6A2P12110 1019 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 CHRNA4P43681 627 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 SLC16A1P53985 500 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 RPL38P63173 70 aaKnown RBP14.25□□□□□ -0.13
NPHP4-208ENST00000478423 ABRQ12979 859 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 SQLEQ14534 574 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 MAPKAPK3Q16644 382 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 KIAA0408Q6ZU52 694 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 CYP4X1Q8N118 509 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 478.3 ms