RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 FNIP1Q8TF40 1166 aa13.07□□□□□ -0.32
ABCF3-212ENST00000478288 TSACCQ96A04 125 aaPredicted RBP13.07□□□□□ -0.32
ABCF3-212ENST00000478288 CCDC74AQ96AQ1 378 aa13.07□□□□□ -0.32
ABCF3-212ENST00000478288 TMEM159Q96B96 161 aa13.07□□□□□ -0.32
ABCF3-212ENST00000478288 TMEM74Q96NL1 305 aa13.07□□□□□ -0.32
ABCF3-212ENST00000478288 SYT11Q9BT88 431 aa13.07□□□□□ -0.32
ABCF3-212ENST00000478288 LMBRD1Q9NUN5 540 aa13.07□□□□□ -0.32
ABCF3-212ENST00000478288 SEPT11Q9NVA2 429 aaKnown RBP13.07□□□□□ -0.32
ABCF3-212ENST00000478288 ATXN7L1Q9ULK2 861 aaPredicted RBP13.07□□□□□ -0.32
ABCF3-212ENST00000478288 MYO6Q9UM54 1294 aa13.07□□□□□ -0.32
ABCF3-212ENST00000478288 GPR34Q9UPC5 381 aa13.07□□□□□ -0.32
ABCF3-212ENST00000478288 AP4E1Q9UPM8 1137 aa13.07□□□□□ -0.32
ABCF3-212ENST00000478288 COQ6Q9Y2Z9 468 aa13.07□□□□□ -0.32
ABCF3-212ENST00000478288 HECTD1Q9ULT8 2610 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 A0A1W2PQM1 296 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 PMS2P1A4D2B8 440 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 J3KR12 359 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 CACNB4O00305 520 aaPredicted RBP13.06□□□□□ -0.32
ABCF3-212ENST00000478288 BUB1BO60566 1050 aaPredicted RBP13.06□□□□□ -0.32
ABCF3-212ENST00000478288 TNFP01375 233 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 GLB1P16278 677 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 TRIM23P36406 574 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 PAPOLAP51003 745 aaKnown RBP13.06□□□□□ -0.32
ABCF3-212ENST00000478288 INHBCP55103 352 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 OGDHQ02218 1023 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 UBXN1Q04323 297 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 RALGDSQ12967 914 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 MAMLD1Q13495 774 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 CERCAMQ5T4B2 595 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 OGFOD3Q6PK18 319 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 DPPA4Q7L190 304 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 RAB11FIP2Q7L804 512 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 APTXQ7Z2E3 356 aaKnown RBP13.06□□□□□ -0.32
ABCF3-212ENST00000478288 SRLQ86TD4 932 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 CAMK1DQ8IU85 385 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 NETO2Q8NC67 525 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 TSEN2Q8NCE0 465 aaKnown RBP13.06□□□□□ -0.32
ABCF3-212ENST00000478288 OR56A4Q8NGH8 313 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 MED8Q96G25 268 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 PDXPQ96GD0 296 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 PCMTD1Q96MG8 357 aaPredicted RBP13.06□□□□□ -0.32
ABCF3-212ENST00000478288 PARVAQ9NVD7 372 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 ANO10Q9NW15 660 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 GULP1Q9UBP9 304 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 RABGEF1Q9UJ41 708 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 OR1A2Q9Y585 309 aa13.06□□□□□ -0.32
ABCF3-212ENST00000478288 ZFC3H1O60293 1989 aaKnown RBP13.06□□□□□ -0.32
ABCF3-212ENST00000478288 UBR5O95071 2799 aaPredicted RBP13.05□□□□□ -0.32
ABCF3-212ENST00000478288 A0A1W2PQ67 120 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 EEF2KO00418 725 aaKnown RBP13.05□□□□□ -0.32
ABCF3-212ENST00000478288 TRAFD1O14545 582 aaPredicted RBP13.05□□□□□ -0.32
ABCF3-212ENST00000478288 NVLO15381 856 aaKnown RBP13.05□□□□□ -0.32
ABCF3-212ENST00000478288 PALMO75781 387 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 RECQL5O94762 991 aaPredicted RBP13.05□□□□□ -0.32
ABCF3-212ENST00000478288 PCCBP05166 539 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 RPLP0P05388 317 aaKnown RBP13.05□□□□□ -0.32
ABCF3-212ENST00000478288 ELFN1P0C7U0 828 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 ATP1A3P13637 1013 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 UGT1A5P35504 534 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 RGRP47804 291 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 HCAR3P49019 387 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 AP1S1P61966 158 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 IL10RBQ08334 325 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 STX1AQ16623 288 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 TSR1Q2NL82 804 aaKnown RBP13.05□□□□□ -0.32
ABCF3-212ENST00000478288 ERMARDQ5T6L9 678 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 TMCO4Q5TGY1 634 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 PLEKHA7Q6IQ23 1121 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 LIPIQ6XZB0 460 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 CCDC81Q6ZN84 652 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 RFX8Q6ZV50 586 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 B3GNT8Q7Z7M8 397 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 CCNJLQ8IV13 435 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 ARHGAP12Q8IWW6 846 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 FBXO39Q8N4B4 442 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 FUBP1Q96AE4 644 aaKnown RBP13.05□□□□□ -0.32
ABCF3-212ENST00000478288 ZNF599Q96NL3 588 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 PSKH2Q96QS6 385 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 CCNL2Q96S94 520 aaPredicted RBP13.05□□□□□ -0.32
ABCF3-212ENST00000478288 CINPQ9BW66 212 aaPredicted RBP13.05□□□□□ -0.32
ABCF3-212ENST00000478288 B3GNT4Q9C0J1 378 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 SLC39A8Q9C0K1 460 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 LRRN3Q9H3W5 708 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 SYNDIG1Q9H7V2 258 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 KCTD5Q9NXV2 234 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 SIRPGQ9P1W8 387 aa13.05□□□□□ -0.32
ABCF3-212ENST00000478288 J3QKU1 62 aa13.04□□□□□ -0.32
ABCF3-212ENST00000478288 PDE2AO00408 941 aaPredicted RBP13.04□□□□□ -0.32
ABCF3-212ENST00000478288 CASC3O15234 703 aaKnown RBP13.04□□□□□ -0.32
ABCF3-212ENST00000478288 NUDT21O43809 227 aaKnown RBP13.04□□□□□ -0.32
ABCF3-212ENST00000478288 SOCS5O75159 536 aa13.04□□□□□ -0.32
ABCF3-212ENST00000478288 PSMA2P25787 234 aa13.04□□□□□ -0.32
ABCF3-212ENST00000478288 HSPA9P38646 679 aaKnown RBP13.04□□□□□ -0.32
ABCF3-212ENST00000478288 RENBPP51606 427 aa13.04□□□□□ -0.32
ABCF3-212ENST00000478288 CCL7P80098 99 aa13.04□□□□□ -0.32
ABCF3-212ENST00000478288 ZFP36L1Q07352 338 aaKnown RBP13.04□□□□□ -0.32
ABCF3-212ENST00000478288 BCL2L1Q07817 233 aa13.04□□□□□ -0.32
ABCF3-212ENST00000478288 CLPPQ16740 277 aaPredicted RBP13.04□□□□□ -0.32
ABCF3-212ENST00000478288 FOXR1Q6PIV2 292 aa13.04□□□□□ -0.32
ABCF3-212ENST00000478288 XKR5Q6UX68 686 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms