RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 ATXN3LQ9H3M9 355 aa12.27□□□□□ -0.45
PTPRF-212ENST00000477970 LRFN2Q9ULH4 789 aa12.27□□□□□ -0.45
PTPRF-212ENST00000477970 VWA7Q9Y334 891 aa12.27□□□□□ -0.45
PTPRF-212ENST00000477970 ARIH1Q9Y4X5 557 aaPredicted RBP12.27□□□□□ -0.45
PTPRF-212ENST00000477970 GBF1Q92538 1859 aa12.27□□□□□ -0.45
PTPRF-212ENST00000477970 IPO13O94829 963 aaKnown RBP12.27□□□□□ -0.45
PTPRF-212ENST00000477970 CXCL10P02778 98 aa12.27□□□□□ -0.45
PTPRF-212ENST00000477970 ANPEPP15144 967 aa12.27□□□□□ -0.45
PTPRF-212ENST00000477970 PIK3R1P27986 724 aa12.27□□□□□ -0.45
PTPRF-212ENST00000477970 TUFMP49411 452 aaKnown RBP12.27□□□□□ -0.45
PTPRF-212ENST00000477970 CLNS1AP54105 237 aaKnown RBP12.27□□□□□ -0.45
PTPRF-212ENST00000477970 ZNF460Q14592 562 aa12.27□□□□□ -0.45
PTPRF-212ENST00000477970 TYSND1Q2T9J0 566 aa12.27□□□□□ -0.45
PTPRF-212ENST00000477970 CHSY3Q70JA7 882 aa12.27□□□□□ -0.45
PTPRF-212ENST00000477970 PELI3Q8N2H9 469 aa12.27□□□□□ -0.45
PTPRF-212ENST00000477970 LRRC43Q8N309 656 aa12.27□□□□□ -0.45
PTPRF-212ENST00000477970 FBXW8Q8N3Y1 598 aa12.27□□□□□ -0.45
PTPRF-212ENST00000477970 AFAP1L2Q8N4X5 818 aa12.27□□□□□ -0.45
PTPRF-212ENST00000477970 PPFIBP2Q8ND30 876 aa12.27□□□□□ -0.45
PTPRF-212ENST00000477970 SEPT5Q99719 369 aaPredicted RBP12.27□□□□□ -0.45
PTPRF-212ENST00000477970 SSX2IPQ9Y2D8 614 aa12.27□□□□□ -0.45
PTPRF-212ENST00000477970 CENPFP49454 3210 aa12.27□□□□□ -0.45
PTPRF-212ENST00000477970 CCDC189A1A4V9 331 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 MEI4A8MW99 385 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 H3BNC9 293 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 KIAA0355O15063 1070 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 RPP40O75818 363 aaKnown RBP12.26□□□□□ -0.45
PTPRF-212ENST00000477970 HOXD9P28356 352 aaPredicted RBP12.26□□□□□ -0.45
PTPRF-212ENST00000477970 ATP5C1P36542 298 aaKnown RBP12.26□□□□□ -0.45
PTPRF-212ENST00000477970 GLRBP48167 497 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 MAXP61244 160 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 ITKQ08881 620 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 TRIM67Q6ZTA4 783 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 MIB1Q86YT6 1006 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 APLFQ8IW19 511 aaPredicted RBP12.26□□□□□ -0.45
PTPRF-212ENST00000477970 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.26□□□□□ -0.45
PTPRF-212ENST00000477970 FAM136AQ96C01 138 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 POMKQ9H5K3 350 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 MEAF6Q9HAF1 191 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 INTS10Q9NVR2 710 aaKnown RBP12.26□□□□□ -0.45
PTPRF-212ENST00000477970 LRCH1Q9Y2L9 728 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 SLC27A5Q9Y2P5 690 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 E9PBE3 544 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 KDELR3O43731 214 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 KLHL41O60662 606 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 SAT1P21673 171 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 ZNF235Q14590 738 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 MUM1Q2TAK8 710 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 IFT43Q96FT9 208 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 CLPTM1LQ96KA5 538 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 MYRFLQ96LU7 910 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 PSKH2Q96QS6 385 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 SEMA3CQ99985 751 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 CCSER2Q9H7U1 834 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 ZBTB26Q9HCK0 441 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 S100A14Q9HCY8 104 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 GEMIN8Q9NWZ8 242 aaKnown RBP12.26□□□□□ -0.45
PTPRF-212ENST00000477970 SEPT3Q9UH03 358 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 A8MT66 165 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 AURKAO14965 403 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 NDST3O95803 873 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 SP100P23497 879 aaPredicted RBP12.26□□□□□ -0.45
PTPRF-212ENST00000477970 ACVRL1P37023 503 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 SLC11A2P49281 568 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 NAA20P61599 178 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 IRX1P78414 480 aaPredicted RBP12.26□□□□□ -0.45
PTPRF-212ENST00000477970 XIAPP98170 497 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 GNA12Q03113 381 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 MRNIPQ6NTE8 343 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 ZNF783Q6ZMS7 281 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 POU5F2Q8N7G0 328 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 LENG8Q96PV6 779 aaPredicted RBP12.26□□□□□ -0.45
PTPRF-212ENST00000477970 ASB2Q96Q27 587 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 PLXNA4Q9HCM2 1894 aa12.26□□□□□ -0.45
PTPRF-212ENST00000477970 CLDN11O75508 207 aa12.25□□□□□ -0.45
PTPRF-212ENST00000477970 SOAT2O75908 522 aa12.25□□□□□ -0.45
PTPRF-212ENST00000477970 LATS1O95835 1130 aa12.25□□□□□ -0.45
PTPRF-212ENST00000477970 SERPINF2P08697 491 aa12.25□□□□□ -0.45
PTPRF-212ENST00000477970 IMPDH1P20839 514 aa12.25□□□□□ -0.45
PTPRF-212ENST00000477970 CD9P21926 228 aa12.25□□□□□ -0.45
PTPRF-212ENST00000477970 PRAMEP78395 509 aa12.25□□□□□ -0.45
PTPRF-212ENST00000477970 DUSP4Q13115 394 aa12.25□□□□□ -0.45
PTPRF-212ENST00000477970 ZNF789Q5FWF6 425 aa12.25□□□□□ -0.45
PTPRF-212ENST00000477970 IRGCQ6NXR0 463 aa12.25□□□□□ -0.45
PTPRF-212ENST00000477970 RHEBL1Q8TAI7 183 aa12.25□□□□□ -0.45
PTPRF-212ENST00000477970 GPR152Q8TDT2 470 aa12.25□□□□□ -0.45
PTPRF-212ENST00000477970 HDAC10Q969S8 669 aa12.25□□□□□ -0.45
PTPRF-212ENST00000477970 MYEOVQ96EZ4 313 aa12.25□□□□□ -0.45
PTPRF-212ENST00000477970 TRMT2BQ96GJ1 504 aaKnown RBP12.25□□□□□ -0.45
PTPRF-212ENST00000477970 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.25□□□□□ -0.456e-11■□□□□ 10.5
PTPRF-212ENST00000477970 HACD3Q9P035 362 aa12.25□□□□□ -0.45
PTPRF-212ENST00000477970 STOML2Q9UJZ1 356 aa12.25□□□□□ -0.45
PTPRF-212ENST00000477970 ILVBLA1L0T0 632 aa12.25□□□□□ -0.45
PTPRF-212ENST00000477970 MUSKO15146 869 aa12.25□□□□□ -0.45
PTPRF-212ENST00000477970 MAP3K7O43318 606 aa12.25□□□□□ -0.45
PTPRF-212ENST00000477970 GLP2RO95838 553 aa12.25□□□□□ -0.45
PTPRF-212ENST00000477970 CR2P20023 1033 aa12.25□□□□□ -0.45
PTPRF-212ENST00000477970 SLC6A4P31645 630 aa12.25□□□□□ -0.45
PTPRF-212ENST00000477970 PPP3CCP48454 512 aa12.25□□□□□ -0.45
PTPRF-212ENST00000477970 ARSDP51689 593 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms