RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	MAX	P61244	160 aa		13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	PPARD	Q03181	441 aa		13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	ITK	Q08881	620 aa		13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	GALNT2	Q10471	571 aa		13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	TBX2	Q13207	712 aa	Predicted RBP	13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	MTM1	Q13496	603 aa		13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	CAMK2B	Q13554	666 aa		13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	IFI16	Q16666	785 aa	Known RBP	13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	PRRT3	Q5FWE3	981 aa		13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	HES3	Q5TGS1	186 aa		13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	NCBP2-AS2	Q69YL0	99 aa		13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	TIGD7	Q6NT04	549 aa	Predicted RBP	13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	ZCCHC8	Q6NZY4	707 aa	Known RBP	13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	SARM1	Q6SZW1	724 aa		13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	DPPA4	Q7L190	304 aa		13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	PHACTR4	Q8IZ21	702 aa		13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	TEX26	Q8N6G2	289 aa		13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	ATL2	Q8NHH9	583 aa		13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	TBATA	Q96M53	351 aa		13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	IL12RB2	Q99665	862 aa		13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	USP29	Q9HBJ7	922 aa		13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	NT5M	Q9NPB1	228 aa		13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	HAUS2	Q9NVX0	235 aa		13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	NCKIPSD	Q9NZQ3	722 aa		13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	APOBEC3B	Q9UH17	382 aa	Known RBP	13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937	USP24	Q9UPU5	2620 aa		13.87	□□□□□ -0.19
HDAC7-222	ENST00000477937		A8MX80	341 aa		13.86	□□□□□ -0.19
HDAC7-222	ENST00000477937	TPP1	O14773	563 aa		13.86	□□□□□ -0.19
HDAC7-222	ENST00000477937	MATN3	O15232	486 aa		13.86	□□□□□ -0.19
HDAC7-222	ENST00000477937	CP	P00450	1065 aa		13.86	□□□□□ -0.19
HDAC7-222	ENST00000477937	PCCB	P05166	539 aa		13.86	□□□□□ -0.19
HDAC7-222	ENST00000477937	CCNC	P24863	283 aa		13.86	□□□□□ -0.19
HDAC7-222	ENST00000477937	RALGDS	Q12967	914 aa		13.86	□□□□□ -0.19
HDAC7-222	ENST00000477937	ENPP7	Q6UWV6	458 aa		13.86	□□□□□ -0.19
HDAC7-222	ENST00000477937	PROSER1	Q86XN7	944 aa		13.86	□□□□□ -0.19
HDAC7-222	ENST00000477937	RBFA	Q8N0V3	343 aa		13.86	□□□□□ -0.19
HDAC7-222	ENST00000477937	CACTIN-AS1	Q8N1I8	211 aa		13.86	□□□□□ -0.19
HDAC7-222	ENST00000477937	MDM1	Q8TC05	714 aa		13.86	□□□□□ -0.19
HDAC7-222	ENST00000477937	RFFL	Q8WZ73	363 aa		13.86	□□□□□ -0.19
HDAC7-222	ENST00000477937	FATE1	Q969F0	183 aa		13.86	□□□□□ -0.19
HDAC7-222	ENST00000477937	FAF2	Q96CS3	445 aa		13.86	□□□□□ -0.19
HDAC7-222	ENST00000477937	ANP32E	Q9BTT0	268 aa		13.86	□□□□□ -0.19
HDAC7-222	ENST00000477937	TCEAL2	Q9H3H9	227 aa	Predicted RBP	13.86	□□□□□ -0.19
HDAC7-222	ENST00000477937	KCTD5	Q9NXV2	234 aa		13.86	□□□□□ -0.19
HDAC7-222	ENST00000477937	SALL4	Q9UJQ4	1053 aa		13.86	□□□□□ -0.19
HDAC7-222	ENST00000477937	INTU	Q9ULD6	942 aa		13.86	□□□□□ -0.19
HDAC7-222	ENST00000477937	PHTF1	Q9UMS5	762 aa		13.86	□□□□□ -0.19
HDAC7-222	ENST00000477937	TAF4	O00268	1085 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	GCAT	O75600	419 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	MTA2	O94776	668 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	GP1BA	P07359	652 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	CYP2A6	P11509	494 aa	Predicted RBP	13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	CTSE	P14091	401 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	MX2	P20592	715 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	CES1	P23141	567 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	HK3	P52790	923 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	CLDN6	P56747	220 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	INSM1	Q01101	510 aa	Predicted RBP	13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	TRAF2	Q12933	501 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	TARDBP	Q13148	414 aa	Known RBP eCLIP	13.85	□□□□□ -0.19	5e-10	■■■■■ 38.5
HDAC7-222	ENST00000477937	C1orf61	Q13536	156 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	NFATC4	Q14934	902 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	ACOX1	Q15067	660 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	DEFB133	Q30KQ1	61 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	ARMC12	Q5T9G4	340 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	HID1	Q8IV36	788 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	NDUFAF2	Q8N183	169 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	FSTL5	Q8N475	847 aa	Predicted RBP	13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	PQLC3	Q8N755	202 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	PLA2G15	Q8NCC3	412 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	RAPGEF5	Q92565	580 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	GLMN	Q92990	594 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	TSGA13	Q96PP4	275 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	RNF157	Q96PX1	679 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	SEMA3C	Q99985	751 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	POLR1E	Q9GZS1	481 aa	Known RBP	13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	DKK4	Q9UBT3	224 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	B4GALT6	Q9UBX8	382 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	AMACR	Q9UHK6	382 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	PNMA8B	Q9ULN7	279 aa	Predicted RBP	13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	DOLK	Q9UPQ8	538 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	CLCA2	Q9UQC9	943 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	OR1A2	Q9Y585	309 aa		13.85	□□□□□ -0.19
HDAC7-222	ENST00000477937	ASXL3	Q9C0F0	2248 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	ASPM	Q8IZT6	3477 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	LY6G6E	A0A0G2JKS1	128 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	LRRD1	A4D1F6	860 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	LMO7DN	F2Z398	122 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	CACNB4	O00305	520 aa	Predicted RBP	13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	RASGRP1	O95267	797 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	PGLS	O95336	258 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	MAP3K6	O95382	1288 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	ANXA6	P08133	673 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	ALPI	P09923	528 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	MYF5	P13349	255 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	KRT10	P13645	584 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	CCNB1	P14635	433 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	TSHR	P16473	764 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	VIPR1	P32241	457 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	SRP54	P61011	504 aa	Known RBP	13.84	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 59 ms