RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 HJURPQ8NCD3 748 aaPredicted RBP14.69□□□□□ -0.06
HDAC6-220ENST00000477528 RMND5BQ96G75 393 aaPredicted RBP14.69□□□□□ -0.06
HDAC6-220ENST00000477528 C9orf16Q9BUW7 83 aa14.69□□□□□ -0.06
HDAC6-220ENST00000477528 SEMA6AQ9H2E6 1030 aa14.69□□□□□ -0.06
HDAC6-220ENST00000477528 ATP11BQ9Y2G3 1177 aa14.69□□□□□ -0.06
HDAC6-220ENST00000477528 NT5C1B-RDH14C9J2C7 533 aa14.69□□□□□ -0.06
HDAC6-220ENST00000477528 MZF1P28698 734 aaPredicted RBP14.69□□□□□ -0.06
HDAC6-220ENST00000477528 HALP42357 657 aa14.69□□□□□ -0.06
HDAC6-220ENST00000477528 FAM120BQ96EK7 910 aaKnown RBP14.69□□□□□ -0.06
HDAC6-220ENST00000477528 ASB8Q9H765 288 aa14.69□□□□□ -0.06
HDAC6-220ENST00000477528 ZMYM5Q9UJ78 669 aa14.69□□□□□ -0.06
HDAC6-220ENST00000477528 TBL1XO60907 577 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 CYP2A7P20853 494 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 TAS2R39P59534 338 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 IL10RBQ08334 325 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 NOGQ13253 232 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 DSELQ8IZU8 1212 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 ZNF558Q96NG5 402 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 OXCT2Q9BYC2 517 aaPredicted RBP14.68□□□□□ -0.06
HDAC6-220ENST00000477528 BPIFA1Q9NP55 256 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 CRTAC1Q9NQ79 661 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 ACSS2Q9NR19 701 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 GNPTGQ9UJJ9 305 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 PSMD13Q9UNM6 376 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 CARNS1A5YM72 827 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 SLC7A4O43246 635 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 SEC22BO75396 215 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 OR1D2P34982 312 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 LSM12Q3MHD2 195 aaKnown RBP14.68□□□□□ -0.06
HDAC6-220ENST00000477528 TAGAPQ8N103 731 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 PQLC1Q8N2U9 271 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 CNTD1Q8N815 330 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 STYXQ8WUJ0 223 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 ZNF358Q9NW07 568 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 ZMYND8Q9ULU4 1186 aaPredicted RBP14.68□□□□□ -0.06
HDAC6-220ENST00000477528 A0A0U1RQF3 1178 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 C5orf58C9J3I9 102 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 NPHS1O60500 1241 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 GPR32O75388 356 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 CKBP12277 381 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 SELPP16109 830 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 HDCP19113 662 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 MOGSQ13724 837 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 PDK3Q15120 406 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 PGS1Q32NB8 556 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 LDLRAD1Q5T700 205 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 GDF6Q6KF10 455 aaPredicted RBP14.68□□□□□ -0.06
HDAC6-220ENST00000477528 ADAMTSL2Q86TH1 951 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 YAF2Q8IY57 180 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 SUSD3Q96L08 255 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 TBATAQ96M53 351 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 NPAS2Q99743 824 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 DLEC1Q9Y238 1755 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 DEAF1O75398 565 aaPredicted RBP14.68□□□□□ -0.06
HDAC6-220ENST00000477528 AMHP03971 560 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 ATP6V1B2P21281 511 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 HOXA11P31270 313 aaPredicted RBP14.68□□□□□ -0.06
HDAC6-220ENST00000477528 SMAD3P84022 425 aaKnown RBP14.68□□□□□ -0.06
HDAC6-220ENST00000477528 ZNF33AQ06730 810 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 GPR158Q5T848 1215 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 GPRIN3Q6ZVF9 776 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 NMD3Q96D46 503 aaKnown RBP14.68□□□□□ -0.06
HDAC6-220ENST00000477528 SCN3BQ9NY72 215 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 PRKAG3Q9UGI9 489 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 LEF1Q9UJU2 399 aaPredicted RBP14.68□□□□□ -0.06
HDAC6-220ENST00000477528 BTRCQ9Y297 605 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 TLR6Q9Y2C9 796 aa14.68□□□□□ -0.06
HDAC6-220ENST00000477528 ZNF839A8K0R7 811 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 RFPL1O75677 317 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 MC4RP32245 332 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 GRIA3P42263 894 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 PGAM4Q8N0Y7 254 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 HEXDCQ8WVB3 486 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 MYRFQ9Y2G1 1151 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 ITM2AO43736 263 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 IDO1P14902 403 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 SLC1A2P43004 574 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 ACSBG2Q5FVE4 666 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 LRRC8DQ7L1W4 858 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 PSMG2Q969U7 264 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 PTCD3Q96EY7 689 aaKnown RBP14.67□□□□□ -0.06
HDAC6-220ENST00000477528 OXSMQ9NWU1 459 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 FNIP2Q9P278 1114 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 NRP2O60462 931 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 IRF9Q00978 393 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 USP45Q70EL2 814 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 TM6SF2Q9BZW4 377 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 ZCWPW1Q9H0M4 648 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 MAGEH1Q9H213 219 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 MRPL17Q9NRX2 175 aaKnown RBP14.67□□□□□ -0.06
HDAC6-220ENST00000477528 BBIP1A8MTZ0 92 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 SERPINB10P48595 397 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 BNIP2Q12982 314 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 SPDYE7PQ495Y7 208 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 GK5Q6ZS86 529 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 CAMK1DQ8IU85 385 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 OR4K2Q8NGD2 314 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 MCOLN3Q8TDD5 553 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 RNF145Q96MT1 663 aa14.67□□□□□ -0.06
HDAC6-220ENST00000477528 TRMT13Q9NUP7 481 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms