RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 PHF21BQ96EK2 531 aa21.15■□□□□ 0.98
LIMS2-214ENST00000476932 COPS7BQ9H9Q2 264 aaPredicted RBP21.15■□□□□ 0.98
LIMS2-214ENST00000476932 KCTD3Q9Y597 815 aa21.15■□□□□ 0.98
LIMS2-214ENST00000476932 CHD5Q8TDI0 1954 aa21.14■□□□□ 0.98
LIMS2-214ENST00000476932 C15orf38-AP3S2A0A0A6YYH1 394 aa21.14■□□□□ 0.97
LIMS2-214ENST00000476932 TXNDC9O14530 226 aa21.14■□□□□ 0.97
LIMS2-214ENST00000476932 SQLEQ14534 574 aa21.14■□□□□ 0.97
LIMS2-214ENST00000476932 RARS2Q5T160 578 aaKnown RBP21.14■□□□□ 0.97
LIMS2-214ENST00000476932 KLC3Q6P597 504 aa21.14■□□□□ 0.97
LIMS2-214ENST00000476932 ARPINQ7Z6K5 226 aa21.14■□□□□ 0.97
LIMS2-214ENST00000476932 IGSF8Q969P0 613 aa21.14■□□□□ 0.97
LIMS2-214ENST00000476932 HDAC10Q969S8 669 aa21.14■□□□□ 0.97
LIMS2-214ENST00000476932 PKP2Q99959 881 aa21.14■□□□□ 0.97
LIMS2-214ENST00000476932 SP110Q9HB58 689 aa21.14■□□□□ 0.97
LIMS2-214ENST00000476932 VWA7Q9Y334 891 aa21.14■□□□□ 0.97
LIMS2-214ENST00000476932 GBF1Q92538 1859 aa21.14■□□□□ 0.97
LIMS2-214ENST00000476932 TRIM38O00635 465 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 LDB2O43679 373 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 GJB3O75712 270 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 ASGR1P07306 291 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 HDCP19113 662 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 GRK4P32298 578 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 PSME3P61289 254 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 LRP8Q14114 963 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 IFNL1Q8IU54 200 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 LRGUKQ96M69 825 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 SPATA16Q9BXB7 569 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 EML4Q9HC35 981 aaKnown RBP21.13■□□□□ 0.97
LIMS2-214ENST00000476932 TRPC7Q9HCX4 862 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 CACNA2D2Q9NY47 1150 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 UXTQ9UBK9 157 aaPredicted RBP21.13■□□□□ 0.97
LIMS2-214ENST00000476932 BCAP29Q9UHQ4 241 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 SARDHQ9UL12 918 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 OAZ2O95190 189 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 SMIM18P0DKX4 95 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 SLC2A3P11169 496 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 DSC1Q08554 894 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 TRIM71Q2Q1W2 868 aaKnown RBP21.13■□□□□ 0.97
LIMS2-214ENST00000476932 CNPY1Q3B7I2 92 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 GPR158Q5T848 1215 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 ISCA2Q86U28 154 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 TTC9BQ8N6N2 239 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 PCDH20Q8N6Y1 951 aaKnown RBP21.13■□□□□ 0.97
LIMS2-214ENST00000476932 ZFAND2BQ8WV99 257 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 C8orf48Q96LL4 319 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 ALG9Q9H6U8 611 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 UBAP1Q9NZ09 502 aa21.13■□□□□ 0.97
LIMS2-214ENST00000476932 LOC285095A0A1B0GVY8 99 aa21.12■□□□□ 0.97
LIMS2-214ENST00000476932 TCN1P20061 433 aaPredicted RBP21.12■□□□□ 0.97
LIMS2-214ENST00000476932 TRIM32Q13049 653 aa21.12■□□□□ 0.97
LIMS2-214ENST00000476932 FASTKQ14296 549 aaKnown RBP21.12■□□□□ 0.97
LIMS2-214ENST00000476932 CWF19L1Q69YN2 538 aaKnown RBP21.12■□□□□ 0.97
LIMS2-214ENST00000476932 REP15Q6BDI9 236 aa21.12■□□□□ 0.97
LIMS2-214ENST00000476932 SLC22A9Q8IVM8 553 aa21.12■□□□□ 0.97
LIMS2-214ENST00000476932 TMEM102Q8N9M5 508 aaPredicted RBP21.12■□□□□ 0.97
LIMS2-214ENST00000476932 PTERQ96BW5 349 aa21.12■□□□□ 0.97
LIMS2-214ENST00000476932 ASB9Q96DX5 294 aa21.12■□□□□ 0.97
LIMS2-214ENST00000476932 L3HYPDHQ96EM0 354 aa21.12■□□□□ 0.97
LIMS2-214ENST00000476932 MRPL1Q9BYD6 325 aaKnown RBP21.12■□□□□ 0.97
LIMS2-214ENST00000476932 POLR3BQ9NW08 1133 aaPredicted RBP21.12■□□□□ 0.97
LIMS2-214ENST00000476932 SUCOQ9UBS9 1254 aaKnown RBP21.12■□□□□ 0.97
LIMS2-214ENST00000476932 PCDHGB4Q9UN71 923 aa21.12■□□□□ 0.97
LIMS2-214ENST00000476932 PCDHGB5Q9Y5G0 923 aa21.12■□□□□ 0.97
LIMS2-214ENST00000476932 E7ENX8 843 aa21.12■□□□□ 0.97
LIMS2-214ENST00000476932 UBDO15205 165 aa21.12■□□□□ 0.97
LIMS2-214ENST00000476932 TBX18O95935 607 aa21.12■□□□□ 0.97
LIMS2-214ENST00000476932 IMPDH1P20839 514 aa21.12■□□□□ 0.97
LIMS2-214ENST00000476932 ZNF157P51786 506 aaPredicted RBP21.12■□□□□ 0.97
LIMS2-214ENST00000476932 POLE2P56282 527 aa21.12■□□□□ 0.97
LIMS2-214ENST00000476932 TIAL1Q01085 375 aaKnown RBP eCLIP21.12■□□□□ 0.97
LIMS2-214ENST00000476932 ROR2Q01974 943 aaKnown RBP21.12■□□□□ 0.97
LIMS2-214ENST00000476932 EFEMP1Q12805 493 aa21.12■□□□□ 0.97
LIMS2-214ENST00000476932 FBXL22Q6P050 247 aa21.12■□□□□ 0.97
LIMS2-214ENST00000476932 SNX31Q8N9S9 440 aa21.12■□□□□ 0.97
LIMS2-214ENST00000476932 ADCY4Q8NFM4 1077 aa21.12■□□□□ 0.97
LIMS2-214ENST00000476932 OR6P1Q8NGX9 317 aa21.12■□□□□ 0.97
LIMS2-214ENST00000476932 CENPKQ9BS16 269 aa21.12■□□□□ 0.97
LIMS2-214ENST00000476932 PSMD12O00232 456 aaPredicted RBP21.11■□□□□ 0.97
LIMS2-214ENST00000476932 TRIM24O15164 1050 aa21.11■□□□□ 0.97
LIMS2-214ENST00000476932 CRTAMO95727 393 aa21.11■□□□□ 0.97
LIMS2-214ENST00000476932 ACVR1Q04771 509 aa21.11■□□□□ 0.97
LIMS2-214ENST00000476932 CLLU1OSQ5K130 101 aa21.11■□□□□ 0.97
LIMS2-214ENST00000476932 ZNF678Q5SXM1 525 aa21.11■□□□□ 0.97
LIMS2-214ENST00000476932 CLEC6AQ6EIG7 209 aa21.11■□□□□ 0.97
LIMS2-214ENST00000476932 ZNF549Q6P9A3 640 aa21.11■□□□□ 0.97
LIMS2-214ENST00000476932 CIR1Q86X95 450 aaPredicted RBP21.11■□□□□ 0.97
LIMS2-214ENST00000476932 GABPB2Q8TAK5 448 aaPredicted RBP21.11■□□□□ 0.97
LIMS2-214ENST00000476932 NCSTNQ92542 709 aa21.11■□□□□ 0.97
LIMS2-214ENST00000476932 FUBP3Q96I24 572 aaKnown RBP eCLIP21.11■□□□□ 0.97
LIMS2-214ENST00000476932 UNC93B1Q9H1C4 597 aa21.11■□□□□ 0.97
LIMS2-214ENST00000476932 SPC25Q9HBM1 224 aa21.11■□□□□ 0.97
LIMS2-214ENST00000476932 IL37Q9NZH6 218 aa21.11■□□□□ 0.97
LIMS2-214ENST00000476932 TRAF6Q9Y4K3 522 aa21.11■□□□□ 0.97
LIMS2-214ENST00000476932 RNASEH2AO75792 299 aaKnown RBP21.11■□□□□ 0.97
LIMS2-214ENST00000476932 PABPC4LP0CB38 370 aaKnown RBP21.11■□□□□ 0.97
LIMS2-214ENST00000476932 TSPAN8P19075 237 aa21.11■□□□□ 0.97
LIMS2-214ENST00000476932 YWHAQP27348 245 aa21.11■□□□□ 0.97
LIMS2-214ENST00000476932 SLC26A3P40879 764 aa21.11■□□□□ 0.97
LIMS2-214ENST00000476932 NFKB2Q00653 900 aa21.11■□□□□ 0.97
LIMS2-214ENST00000476932 PDAP1Q13442 181 aaKnown RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms