RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 NFATC4Q14934 902 aa10.85□□□□□ -0.67
SEC13-214ENST00000476597 CDKN3Q16667 212 aa10.85□□□□□ -0.67
SEC13-214ENST00000476597 HADHQ16836 314 aaKnown RBP10.85□□□□□ -0.67
SEC13-214ENST00000476597 COL28A1Q2UY09 1125 aa10.85□□□□□ -0.67
SEC13-214ENST00000476597 ENPP7Q6UWV6 458 aa10.85□□□□□ -0.67
SEC13-214ENST00000476597 DPPA4Q7L190 304 aa10.85□□□□□ -0.67
SEC13-214ENST00000476597 LRRC49Q8IUZ0 686 aa10.85□□□□□ -0.67
SEC13-214ENST00000476597 CBARPQ8N350 705 aaPredicted RBP10.85□□□□□ -0.67
SEC13-214ENST00000476597 PGBD5Q8N414 524 aa10.85□□□□□ -0.67
SEC13-214ENST00000476597 FSTL5Q8N475 847 aaPredicted RBP10.85□□□□□ -0.67
SEC13-214ENST00000476597 PLA2G15Q8NCC3 412 aa10.85□□□□□ -0.67
SEC13-214ENST00000476597 ZNF564Q8TBZ8 553 aaPredicted RBP10.85□□□□□ -0.67
SEC13-214ENST00000476597 TSACCQ96A04 125 aaPredicted RBP10.85□□□□□ -0.67
SEC13-214ENST00000476597 NUDCD1Q96RS6 583 aa10.85□□□□□ -0.67
SEC13-214ENST00000476597 LRRC61Q9BV99 259 aa10.85□□□□□ -0.67
SEC13-214ENST00000476597 ABCG4Q9H172 646 aa10.85□□□□□ -0.67
SEC13-214ENST00000476597 RCOR3Q9P2K3 495 aaPredicted RBP10.85□□□□□ -0.67
SEC13-214ENST00000476597 OR1A2Q9Y585 309 aa10.85□□□□□ -0.67
SEC13-214ENST00000476597 PCDHGC4Q9Y5F7 938 aa10.85□□□□□ -0.67
SEC13-214ENST00000476597 LOC400499M0QZD8 3231 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 TLX3O43711 291 aaPredicted RBP10.84□□□□□ -0.67
SEC13-214ENST00000476597 SOCS5O75159 536 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 PROSCO94903 275 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 PCCBP05166 539 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 TPM3P06753 285 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 CELA2BP08218 269 aaPredicted RBP10.84□□□□□ -0.67
SEC13-214ENST00000476597 CD48P09326 243 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 TGM2P21980 687 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 SERPINB6P35237 376 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 EIF2S3P41091 472 aaKnown RBP10.84□□□□□ -0.67
SEC13-214ENST00000476597 RPIAP49247 311 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 SRP54P61011 504 aaKnown RBP10.84□□□□□ -0.67
SEC13-214ENST00000476597 MMRN1Q13201 1228 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 KRT81Q14533 505 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 ZNF235Q14590 738 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 ELOCQ15369 112 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 NR0B2Q15466 257 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 ALG11Q2TAA5 492 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 ASTE1Q2TB18 679 aaPredicted RBP10.84□□□□□ -0.67
SEC13-214ENST00000476597 ATP13A4Q4VNC1 1196 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 RALGPS1Q5JS13 557 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 C6orf132Q5T0Z8 1188 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 MARC1Q5VT66 337 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 GUSBP11Q6P575 273 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 LVRNQ6Q4G3 990 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 NYAP1Q6ZVC0 841 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 EFL1Q7Z2Z2 1120 aaKnown RBP10.84□□□□□ -0.67
SEC13-214ENST00000476597 HID1Q8IV36 788 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 SLC35F3Q8IY50 421 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 BBS5Q8N3I7 341 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 SDR16C5Q8N3Y7 309 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 ATPAF2Q8N5M1 289 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 TEX26Q8N6G2 289 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 PAF1Q8N7H5 531 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 OR8K1Q8NGG5 319 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 ATL2Q8NHH9 583 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 TPCN2Q8NHX9 752 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 PCDH19Q8TAB3 1148 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 MAPK15Q8TD08 544 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 NSMCE1Q8WV22 266 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 GLMNQ92990 594 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 FUBP1Q96AE4 644 aaKnown RBP10.84□□□□□ -0.67
SEC13-214ENST00000476597 WDR92Q96MX6 357 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 DNAJC7Q99615 494 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 MGME1Q9BQP7 344 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 NOD2Q9HC29 1040 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 CTTNBP2NLQ9P2B4 639 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 UVRAGQ9P2Y5 699 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 B4GALT6Q9UBX8 382 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 PHTF1Q9UMS5 762 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 PCDHB1Q9Y5F3 818 aa10.84□□□□□ -0.67
SEC13-214ENST00000476597 SSU72P8A0A1W2PR75 194 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 A8MX80 341 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 CBFA2T2O43439 604 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 RASGRP1O95267 797 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 TNFP01375 233 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 ALPIP09923 528 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 H2AFZP0C0S5 128 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 ELFN1P0C7U0 828 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 CTSEP14091 401 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 SSR1P43307 286 aaKnown RBP10.83□□□□□ -0.68
SEC13-214ENST00000476597 MMP13P45452 471 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 MAXP61244 160 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 DPYSL3Q14195 570 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 PAFAH1B3Q15102 231 aaKnown RBP10.83□□□□□ -0.68
SEC13-214ENST00000476597 SLC18A3Q16572 532 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 ISXQ2M1V0 245 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 PERM1Q5SV97 790 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 SPECC1LQ69YQ0 1117 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 ESRP1Q6NXG1 681 aaKnown RBP10.83□□□□□ -0.68
SEC13-214ENST00000476597 H2AFVQ71UI9 128 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 RD3Q7Z3Z2 195 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 PDZD3Q86UT5 571 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 CPNE8Q86YQ8 564 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 KCTD6Q8NC69 237 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 SCG3Q8WXD2 468 aaKnown RBP10.83□□□□□ -0.68
SEC13-214ENST00000476597 FGF11Q92914 225 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 SCRN2Q96FV2 425 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 COQ10AQ96MF6 247 aa10.83□□□□□ -0.68
SEC13-214ENST00000476597 DEPDC7Q96QD5 511 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms