RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 GRIA2P42262 883 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 AP1S1P61966 158 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 PCID2Q5JVF3 399 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 PKN3Q6P5Z2 889 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 C6orf89Q6UWU4 347 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 SERPINA13PQ6UXR4 307 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 CEP128Q6ZU80 1094 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 TMEM135Q86UB9 458 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 OR13C4Q8NGS5 318 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 CABS1Q96KC9 395 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 KLHL32Q96NJ5 620 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 AGAP2Q99490 1192 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 BPIFA1Q9NP55 256 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 GEMIN8Q9NWZ8 242 aaKnown RBP18.18■□□□□ 0.5
ATG4B-217ENST00000475693 SOX13Q9UN79 622 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 TCAF1Q9Y4C2 921 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 WASF2Q9Y6W5 498 aa18.18■□□□□ 0.5
ATG4B-217ENST00000475693 OR51F1A6NGY5 319 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 SHISA7A6NL88 538 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 LDB2O43679 373 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 APODP05090 189 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 ARSDP51689 593 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 EPHB1P54762 984 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 ARMC12Q5T9G4 340 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 SPNS2Q8IVW8 549 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 CTAGE3PQ8IX95 158 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 PPM1NQ8N819 430 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 MAFAQ8NHW3 353 aaPredicted RBP18.17■□□□□ 0.5
ATG4B-217ENST00000475693 GSDMBQ8TAX9 411 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 PPP1R2P1Q96PQ5 205 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 KIFC1Q9BW19 673 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 CEP44Q9C0F1 390 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 ATP13A3Q9H7F0 1226 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 HAUS2Q9NVX0 235 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 POP4O95707 220 aaKnown RBP18.17■□□□□ 0.5
ATG4B-217ENST00000475693 EPOP01588 193 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 POLBP06746 335 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 SRPRAP08240 638 aaKnown RBP18.17■□□□□ 0.5
ATG4B-217ENST00000475693 HLA-DPA1P20036 260 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 CES1P23141 567 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 ABCG1P45844 678 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 CBLBQ13191 982 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 C9orf64Q5T6V5 341 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 PLCD3Q8N3E9 789 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 EID2BQ96D98 161 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 TMEM245Q9H330 911 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 SUV39H2Q9H5I1 410 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 MOCS1Q9NZB8 636 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 PSAT1Q9Y617 370 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 CAPN7Q9Y6W3 813 aa18.17■□□□□ 0.5
ATG4B-217ENST00000475693 RASGRF2O14827 1237 aa18.16■□□□□ 0.5
ATG4B-217ENST00000475693 HTRA2O43464 458 aaPredicted RBP18.16■□□□□ 0.5
ATG4B-217ENST00000475693 VAPBO95292 243 aa18.16■□□□□ 0.5
ATG4B-217ENST00000475693 GSRP00390 522 aa18.16■□□□□ 0.5
ATG4B-217ENST00000475693 ASLP04424 464 aa18.16■□□□□ 0.5
ATG4B-217ENST00000475693 FGF1P05230 155 aa18.16■□□□□ 0.5
ATG4B-217ENST00000475693 EPHX1P07099 455 aa18.16■□□□□ 0.5
ATG4B-217ENST00000475693 ARNTP27540 789 aa18.16■□□□□ 0.5
ATG4B-217ENST00000475693 RECQLP46063 649 aaPredicted RBP18.16■□□□□ 0.5
ATG4B-217ENST00000475693 CSNK1DP48730 415 aa18.16■□□□□ 0.5
ATG4B-217ENST00000475693 HSP90AA5PQ58FG0 334 aa18.16■□□□□ 0.5
ATG4B-217ENST00000475693 STEAP4Q687X5 459 aa18.16■□□□□ 0.5
ATG4B-217ENST00000475693 PPHLN1Q8NEY8 458 aaKnown RBP18.16■□□□□ 0.5
ATG4B-217ENST00000475693 ACSS3Q9H6R3 686 aa18.16■□□□□ 0.5
ATG4B-217ENST00000475693 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.16■□□□□ 0.5
ATG4B-217ENST00000475693 FAM237BA0A1B0GVD1 139 aa18.15■□□□□ 0.5
ATG4B-217ENST00000475693 ABHD2P08910 425 aa18.15■□□□□ 0.5
ATG4B-217ENST00000475693 PRSS56P0CW18 603 aa18.15■□□□□ 0.5
ATG4B-217ENST00000475693 ADRA1DP25100 572 aa18.15■□□□□ 0.5
ATG4B-217ENST00000475693 FSTL4Q6MZW2 842 aa18.15■□□□□ 0.5
ATG4B-217ENST00000475693 TSPAN33Q86UF1 283 aa18.15■□□□□ 0.5
ATG4B-217ENST00000475693 CHPFQ8IZ52 775 aa18.15■□□□□ 0.5
ATG4B-217ENST00000475693 ZNF513Q8N8E2 541 aaPredicted RBP18.15■□□□□ 0.5
ATG4B-217ENST00000475693 OR13J1Q8NGT2 312 aa18.15■□□□□ 0.5
ATG4B-217ENST00000475693 DNAJC1Q96KC8 554 aaKnown RBP18.15■□□□□ 0.5
ATG4B-217ENST00000475693 HEPHQ9BQS7 1158 aa18.15■□□□□ 0.5
ATG4B-217ENST00000475693 RABEP2Q9H5N1 569 aa18.15■□□□□ 0.5
ATG4B-217ENST00000475693 ACTR5Q9H9F9 607 aaPredicted RBP18.15■□□□□ 0.5
ATG4B-217ENST00000475693 C20orf96Q9NUD7 363 aaPredicted RBP18.15■□□□□ 0.5
ATG4B-217ENST00000475693 THAP10Q9P2Z0 257 aaPredicted RBP18.15■□□□□ 0.5
ATG4B-217ENST00000475693 DNAH14Q0VDD8 3507 aa18.15■□□□□ 0.5
ATG4B-217ENST00000475693 SERPINA4P29622 427 aa18.15■□□□□ 0.5
ATG4B-217ENST00000475693 PHBP35232 272 aa18.15■□□□□ 0.5
ATG4B-217ENST00000475693 HNF1BP35680 557 aa18.15■□□□□ 0.5
ATG4B-217ENST00000475693 HNRNPA1L2Q32P51 320 aaKnown RBP18.15■□□□□ 0.5
ATG4B-217ENST00000475693 FBXW10Q5XX13 1052 aa18.15■□□□□ 0.5
ATG4B-217ENST00000475693 CCDC91Q7Z6B0 441 aa18.15■□□□□ 0.5
ATG4B-217ENST00000475693 METTL3Q86U44 580 aaKnown RBP18.15■□□□□ 0.5
ATG4B-217ENST00000475693 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.15■□□□□ 0.5
ATG4B-217ENST00000475693 PAFAH2Q99487 392 aa18.15■□□□□ 0.5
ATG4B-217ENST00000475693 TACO1Q9BSH4 297 aaKnown RBP18.15■□□□□ 0.5
ATG4B-217ENST00000475693 ADGRE3Q9BY15 652 aa18.15■□□□□ 0.5
ATG4B-217ENST00000475693 GMNCA6NCL1 334 aa18.14■□□□□ 0.49
ATG4B-217ENST00000475693 USP1O94782 785 aa18.14■□□□□ 0.49
ATG4B-217ENST00000475693 EIF2DP41214 584 aaKnown RBP18.14■□□□□ 0.49
ATG4B-217ENST00000475693 KIR2DL1P43626 348 aaPredicted RBP18.14■□□□□ 0.49
ATG4B-217ENST00000475693 ACTN3Q08043 901 aaPredicted RBP18.14■□□□□ 0.49
ATG4B-217ENST00000475693 EIF4HQ15056 248 aaKnown RBP18.14■□□□□ 0.49
ATG4B-217ENST00000475693 TSTD2Q5T7W7 516 aa18.14■□□□□ 0.49
ATG4B-217ENST00000475693 GDPD4Q6W3E5 623 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms