RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 HOXA10P31260 410 aaPredicted RBP11.57□□□□□ -0.56
U2AF1-209ENST00000475639 S100A3P33764 101 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 ACLYP53396 1101 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 TOP3AQ13472 1001 aaPredicted RBP11.57□□□□□ -0.56
U2AF1-209ENST00000475639 SUSD4Q5VX71 490 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 RETSATQ6NUM9 610 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 VASH1Q7L8A9 365 aaPredicted RBP11.57□□□□□ -0.56
U2AF1-209ENST00000475639 CAMK1DQ8IU85 385 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 TMEM126BQ8IUX1 230 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 TDRD5Q8NAT2 981 aaKnown RBP11.57□□□□□ -0.56
U2AF1-209ENST00000475639 FNDC5Q8NAU1 212 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 DDX1Q92499 740 aaKnown RBP11.57□□□□□ -0.56
U2AF1-209ENST00000475639 TMEM121Q9BTD3 319 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 NLNQ9BYT8 704 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 OLAHQ9NV23 265 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 PIM2Q9P1W9 311 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 UBQLN1Q9UMX0 589 aaKnown RBP11.57□□□□□ -0.56
U2AF1-209ENST00000475639 LYVE1Q9Y5Y7 322 aa11.57□□□□□ -0.56
U2AF1-209ENST00000475639 C7orf72A4D263 438 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 BTN3A3O00478 584 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 ACSL4O60488 711 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 MMP10P09238 476 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 RPL10AP62906 217 aaKnown RBP11.56□□□□□ -0.56
U2AF1-209ENST00000475639 RBBP4Q09028 425 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 DENND5AQ6IQ26 1287 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 ARMC8Q8IUR7 673 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 ZNF34Q8IZ26 560 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 ITFG1Q8TB96 612 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 KBTBD7Q8WVZ9 684 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 TPD52L3Q96J77 140 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 FIZ1Q96SL8 496 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 SIAEQ9HAT2 523 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 CROCCQ5TZA2 2017 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 SNED1Q8TER0 1413 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 FAM155BO75949 473 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 DHFRP00374 187 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 TCF4P15884 667 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 CYP2A7P20853 494 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 OMPP47874 163 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 ALDH3A2P51648 485 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 BMXP51813 675 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 CDC42P60953 191 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 RHOAP61586 193 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 MYBPC2Q14324 1141 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 GOLGA7BQ2TAP0 167 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 FAM220AQ7Z4H9 259 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 DSG4Q86SJ6 1040 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 KATNAL2Q8IYT4 538 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 C8orf59Q8N0T1 100 aaPredicted RBP11.56□□□□□ -0.56
U2AF1-209ENST00000475639 TMEM132CQ8N3T6 1108 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 HELQQ8TDG4 1101 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 TANKQ92844 425 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 SH2D3AQ9BRG2 576 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 C1QTNF1Q9BXJ1 281 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 HIPK3Q9H422 1215 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.56□□□□□ -0.56
U2AF1-209ENST00000475639 KRBA1A5PL33 1030 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 CAPNS1P04632 268 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 RPL10P27635 214 aaKnown RBP11.56□□□□□ -0.56
U2AF1-209ENST00000475639 EPHA3P29320 983 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 LRPAP1P30533 357 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 BST2Q10589 180 aaKnown RBP11.56□□□□□ -0.56
U2AF1-209ENST00000475639 NRF1Q16656 503 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 ATP13A4Q4VNC1 1196 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 SFRP1Q8N474 314 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 SLC44A1Q8WWI5 657 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 QRFPRQ96P65 431 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 COLEC11Q9BWP8 271 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 RSPH9Q9H1X1 276 aaPredicted RBP11.56□□□□□ -0.56
U2AF1-209ENST00000475639 SACM1LQ9NTJ5 587 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 AKAP7Q9P0M2 348 aaPredicted RBP11.56□□□□□ -0.56
U2AF1-209ENST00000475639 MAP1BP46821 2468 aaKnown RBP11.56□□□□□ -0.56
U2AF1-209ENST00000475639 MAGEB16A2A368 324 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 SERPINE1P05121 402 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 SERPINF2P08697 491 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 HOXB8P17481 243 aaPredicted RBP11.56□□□□□ -0.56
U2AF1-209ENST00000475639 TCEA1P23193 301 aaKnown RBP11.56□□□□□ -0.56
U2AF1-209ENST00000475639 PIK3CGP48736 1102 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 BICRALQ6AI39 1079 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 IGDCC3Q8IVU1 814 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 FBXO39Q8N4B4 442 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 OR52L1Q8NGH7 329 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 PTCD2Q8WV60 388 aaKnown RBP11.56□□□□□ -0.56
U2AF1-209ENST00000475639 CPT1BQ92523 772 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 KLHL32Q96NJ5 620 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 ZFYVE28Q9HCC9 887 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 C8orf4Q9NR00 106 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 ENTPD4Q9Y227 616 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 ERGIC3Q9Y282 383 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 CRYL1Q9Y2S2 319 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 SNCAIPQ9Y6H5 919 aa11.56□□□□□ -0.56
U2AF1-209ENST00000475639 PCP4L1A6NKN8 68 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 WRBO00258 174 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 ZW10O43264 779 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 B3GAT3O94766 335 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 LDOC1O95751 146 aaPredicted RBP11.55□□□□□ -0.56
U2AF1-209ENST00000475639 MPOP05164 745 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 ZNF26P17031 533 aaPredicted RBP11.55□□□□□ -0.56
U2AF1-209ENST00000475639 KLRK1P26718 216 aa11.55□□□□□ -0.56
U2AF1-209ENST00000475639 ALDH7A1P49419 539 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms