RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 ZNF184Q99676 751 aaPredicted RBP14.15□□□□□ -0.14
UBXN11-214ENST00000475591 POLR1EQ9GZS1 481 aaKnown RBP14.15□□□□□ -0.14
UBXN11-214ENST00000475591 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.15□□□□□ -0.14
UBXN11-214ENST00000475591 MFSD1Q9H3U5 465 aa14.15□□□□□ -0.14
UBXN11-214ENST00000475591 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.15□□□□□ -0.14
UBXN11-214ENST00000475591 VTI1BQ9UEU0 232 aa14.15□□□□□ -0.14
UBXN11-214ENST00000475591 GREB1Q4ZG55 1949 aa14.15□□□□□ -0.14
UBXN11-214ENST00000475591 RGSL1A5PLK6 1076 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 ARVCFO00192 962 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 SLC7A4O43246 635 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 NPHS1O60500 1241 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 TRPA1O75762 1119 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 PAPSS2O95340 614 aaPredicted RBP14.14□□□□□ -0.15
UBXN11-214ENST00000475591 RGRP47804 291 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 SGSHP51688 502 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 MTTPP55157 894 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 C1QTNF8P60827 252 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 RPS24P62847 133 aaKnown RBP14.14□□□□□ -0.15
UBXN11-214ENST00000475591 AGAP9Q5VTM2 703 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 PIWIL4Q7Z3Z4 852 aaKnown RBP14.14□□□□□ -0.15
UBXN11-214ENST00000475591 LMNTD2Q8IXW0 634 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 DSELQ8IZU8 1212 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 RNF148Q8N7C7 305 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 PDFQ9HBH1 243 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.14□□□□□ -0.15
UBXN11-214ENST00000475591 ADAMTS6Q9UKP5 1117 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 CCDC162PA2VCL2 907 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 TBKBP1A7MCY6 615 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 STX16-NPEPL1H3BU86 382 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 CFLARO15519 480 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 IPO13O94829 963 aaKnown RBP14.14□□□□□ -0.15
UBXN11-214ENST00000475591 MT-CO1P00395 513 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 MYCP01106 439 aaPredicted RBP14.14□□□□□ -0.15
UBXN11-214ENST00000475591 GALTP07902 379 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 ZDHHC11BP0C7U3 371 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 THRAP10827 490 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 HOXD9P28356 352 aaPredicted RBP14.14□□□□□ -0.15
UBXN11-214ENST00000475591 DPP6P42658 865 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 TIAL1Q01085 375 aaKnown RBP eCLIP14.14□□□□□ -0.15
UBXN11-214ENST00000475591 CYLC2Q14093 348 aaPredicted RBP14.14□□□□□ -0.15
UBXN11-214ENST00000475591 PPP1R3AQ16821 1122 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 LPCAT4Q643R3 524 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 RYBPQ8N488 228 aaPredicted RBP14.14□□□□□ -0.15
UBXN11-214ENST00000475591 PDCD6IPQ8WUM4 868 aaKnown RBP14.14□□□□□ -0.15
UBXN11-214ENST00000475591 USP13Q92995 863 aaPredicted RBP14.14□□□□□ -0.15
UBXN11-214ENST00000475591 SPATA17Q96L03 361 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 GEMIN8Q9NWZ8 242 aaKnown RBP14.14□□□□□ -0.15
UBXN11-214ENST00000475591 LRFN2Q9ULH4 789 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 LRCH1Q9Y2L9 728 aa14.14□□□□□ -0.15
UBXN11-214ENST00000475591 ZFP37Q9Y6Q3 630 aaPredicted RBP14.14□□□□□ -0.15
UBXN11-214ENST00000475591 F5H5T6 163 aa14.13□□□□□ -0.15
UBXN11-214ENST00000475591 UBFD1O14562 309 aaKnown RBP14.13□□□□□ -0.15
UBXN11-214ENST00000475591 SCAMP3O14828 347 aaKnown RBP14.13□□□□□ -0.15
UBXN11-214ENST00000475591 FKBP6O75344 327 aa14.13□□□□□ -0.15
UBXN11-214ENST00000475591 ENO3P13929 434 aaPredicted RBP14.13□□□□□ -0.15
UBXN11-214ENST00000475591 SP100P23497 879 aaPredicted RBP14.13□□□□□ -0.15
UBXN11-214ENST00000475591 ATXN3P54252 364 aaPredicted RBP14.13□□□□□ -0.15
UBXN11-214ENST00000475591 PKNOX1P55347 436 aa14.13□□□□□ -0.15
UBXN11-214ENST00000475591 DNAJB13P59910 316 aa14.13□□□□□ -0.15
UBXN11-214ENST00000475591 CPSF7Q8N684 471 aaKnown RBP14.13□□□□□ -0.15
UBXN11-214ENST00000475591 PTERQ96BW5 349 aa14.13□□□□□ -0.15
UBXN11-214ENST00000475591 NPAS2Q99743 824 aa14.13□□□□□ -0.15
UBXN11-214ENST00000475591 SPON2Q9BUD6 331 aa14.13□□□□□ -0.15
UBXN11-214ENST00000475591 ZBTB26Q9HCK0 441 aa14.13□□□□□ -0.15
UBXN11-214ENST00000475591 DONSONQ9NYP3 566 aa14.13□□□□□ -0.15
UBXN11-214ENST00000475591 WISP3O95389 354 aaPredicted RBP14.13□□□□□ -0.15
UBXN11-214ENST00000475591 KPNA2P52292 529 aaKnown RBP14.13□□□□□ -0.15
UBXN11-214ENST00000475591 THOP1P52888 689 aa14.13□□□□□ -0.15
UBXN11-214ENST00000475591 RING1Q06587 406 aa14.13□□□□□ -0.15
UBXN11-214ENST00000475591 KLC1Q07866 573 aa14.13□□□□□ -0.15
UBXN11-214ENST00000475591 TNK2Q07912 1038 aa14.13□□□□□ -0.15
UBXN11-214ENST00000475591 SLC14A2Q15849 920 aa14.13□□□□□ -0.15
UBXN11-214ENST00000475591 CLEC6AQ6EIG7 209 aa14.13□□□□□ -0.15
UBXN11-214ENST00000475591 GK5Q6ZS86 529 aa14.13□□□□□ -0.15
UBXN11-214ENST00000475591 DHDDSQ86SQ9 333 aa14.13□□□□□ -0.15
UBXN11-214ENST00000475591 CUZD1Q86UP6 607 aa14.13□□□□□ -0.15
UBXN11-214ENST00000475591 DENND1CQ8IV53 801 aa14.13□□□□□ -0.15
UBXN11-214ENST00000475591 SCLYQ96I15 445 aa14.13□□□□□ -0.15
UBXN11-214ENST00000475591 CDRT15Q96T59 188 aa14.13□□□□□ -0.15
UBXN11-214ENST00000475591 DPPA5A6NC42 116 aa14.12□□□□□ -0.15
UBXN11-214ENST00000475591 LRRC14BA6NHZ5 514 aa14.12□□□□□ -0.15
UBXN11-214ENST00000475591 SLCO1B7G3V0H7 640 aa14.12□□□□□ -0.15
UBXN11-214ENST00000475591 CD3EAPO15446 510 aaKnown RBP14.12□□□□□ -0.15
UBXN11-214ENST00000475591 HDCP19113 662 aa14.12□□□□□ -0.15
UBXN11-214ENST00000475591 MAPKAPK2P49137 400 aa14.12□□□□□ -0.15
UBXN11-214ENST00000475591 HK2P52789 917 aa14.12□□□□□ -0.15
UBXN11-214ENST00000475591 CDC16Q13042 620 aa14.12□□□□□ -0.15
UBXN11-214ENST00000475591 PTPRRQ15256 657 aa14.12□□□□□ -0.15
UBXN11-214ENST00000475591 KLC3Q6P597 504 aa14.12□□□□□ -0.15
UBXN11-214ENST00000475591 ISCA2Q86U28 154 aa14.12□□□□□ -0.15
UBXN11-214ENST00000475591 KYQ8NBH2 561 aa14.12□□□□□ -0.15
UBXN11-214ENST00000475591 FBXO22Q8NEZ5 403 aa14.12□□□□□ -0.15
UBXN11-214ENST00000475591 RP9Q8TA86 221 aaKnown RBP14.12□□□□□ -0.15
UBXN11-214ENST00000475591 WBP2Q969T9 261 aa14.12□□□□□ -0.15
UBXN11-214ENST00000475591 TSPAN17Q96FV3 270 aa14.12□□□□□ -0.15
UBXN11-214ENST00000475591 MAELQ96JY0 434 aaKnown RBP14.12□□□□□ -0.15
UBXN11-214ENST00000475591 PRICKLE1Q96MT3 831 aaPredicted RBP14.12□□□□□ -0.15
UBXN11-214ENST00000475591 TTPALQ9BTX7 342 aa14.12□□□□□ -0.15
UBXN11-214ENST00000475591 CCDC28BQ9BUN5 200 aa14.12□□□□□ -0.15
UBXN11-214ENST00000475591 NACA2Q9H009 215 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms