RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 MAP1BP46821 2468 aaKnown RBP9.49□□□□□ -0.89
PDPN-204ENST00000475043 MYLKQ15746 1914 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 ACACBO00763 2458 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 CHD8Q9HCK8 2581 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 ASPMQ8IZT6 3477 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.48□□□□□ -0.89
PDPN-204ENST00000475043 SSU72P8A0A1W2PR75 194 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 K7ESM1 405 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 MAFKO60675 156 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 MFAP3LO75121 409 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 PROSCO94903 275 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 MAP3K6O95382 1288 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 PCCBP05166 539 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 TMEM253P0C7T8 217 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 ELFN1P0C7U0 828 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 GIMD1P0DJR0 217 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 ACP1P24666 158 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 HSPA9P38646 679 aaKnown RBP9.48□□□□□ -0.89
PDPN-204ENST00000475043 MMP12P39900 470 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 MMP13P45452 471 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 MAXP61244 160 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 PRR20EP86478 221 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 PRR20CP86479 221 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 PRR20DP86480 221 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 PRR20BP86481 221 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 PRR20AP86496 221 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 ITKQ08881 620 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 EIF2B5Q13144 721 aaKnown RBP9.48□□□□□ -0.89
PDPN-204ENST00000475043 TARDBPQ13148 414 aaKnown RBP eCLIP9.48□□□□□ -0.89
PDPN-204ENST00000475043 ILKQ13418 452 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 DPYSL3Q14195 570 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 INPP5AQ14642 412 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 MESDQ14696 234 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 WSCD2Q2TBF2 565 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 DEFB133Q30KQ1 61 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 PRRT3Q5FWE3 981 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 HES3Q5TGS1 186 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 MARC1Q5VT66 337 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 MACC1Q6ZN28 852 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 PROSER1Q86XN7 944 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 MAP7D3Q8IWC1 876 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 RBFAQ8N0V3 343 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 PGBD5Q8N414 524 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 ECHDC3Q96DC8 303 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 THAP11Q96EK4 314 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 APOLD1Q96LR9 279 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 CHP1Q99653 195 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 IL12RB2Q99665 862 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 SLC13A1Q9BZW2 595 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 NHEJ1Q9H9Q4 299 aaPredicted RBP9.48□□□□□ -0.89
PDPN-204ENST00000475043 SPTLC3Q9NUV7 552 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 EVA1BQ9NVM1 165 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 RCOR3Q9P2K3 495 aaPredicted RBP9.48□□□□□ -0.89
PDPN-204ENST00000475043 SPASTQ9UBP0 616 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 LCMT1Q9UIC8 334 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 OR1A2Q9Y585 309 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 PCDHGC4Q9Y5F7 938 aa9.48□□□□□ -0.89
PDPN-204ENST00000475043 KMT2BQ9UMN6 2715 aaPredicted RBP9.47□□□□□ -0.89
PDPN-204ENST00000475043 TRAFD1O14545 582 aaPredicted RBP9.47□□□□□ -0.89
PDPN-204ENST00000475043 TOR1BO14657 336 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 MFSD11O43934 449 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 PEX11BO96011 259 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 KRT7P08729 469 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 CKMT1AP12532 417 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 CTSEP14091 401 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 IL4RP24394 825 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 HTR1BP28222 390 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 DUSP3P51452 185 aaPredicted RBP9.47□□□□□ -0.89
PDPN-204ENST00000475043 TAS2R40P59535 323 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 E2F1Q01094 437 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 PPARDQ03181 441 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 CYP4F3Q08477 520 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 C1orf61Q13536 156 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 ACOX1Q15067 660 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 PDK2Q15119 407 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 TCEA2Q15560 299 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 ASTE1Q2TB18 679 aaPredicted RBP9.47□□□□□ -0.89
PDPN-204ENST00000475043 ANKRD20A8PQ5CZ79 823 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 DENND2CQ68D51 928 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 NCBP2-AS2Q69YL0 99 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 ZCCHC8Q6NZY4 707 aaKnown RBP9.47□□□□□ -0.89
PDPN-204ENST00000475043 ENPP7Q6UWV6 458 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 LIPIQ6XZB0 460 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 DPPA4Q7L190 304 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 RD3Q7Z3Z2 195 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 HID1Q8IV36 788 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 CNGA4Q8IV77 575 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 PHACTR4Q8IZ21 702 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.47□□□□□ -0.89
PDPN-204ENST00000475043 SLC35G2Q8TBE7 412 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 FAM71BQ8TC56 605 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 NSMCE3Q96MG7 304 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 NUDCD1Q96RS6 583 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 MGME1Q9BQP7 344 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 APOOQ9BUR5 198 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 TRIM5Q9C035 493 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 ABCG4Q9H172 646 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 TCEAL2Q9H3H9 227 aaPredicted RBP9.47□□□□□ -0.89
PDPN-204ENST00000475043 NOD2Q9HC29 1040 aa9.47□□□□□ -0.89
PDPN-204ENST00000475043 NT5MQ9NPB1 228 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms