RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 ACSL6Q9UKU0 697 aa13.9□□□□□ -0.18
EPCAM-205ENST00000474691 ATP8A1Q9Y2Q0 1164 aa13.9□□□□□ -0.18
EPCAM-205ENST00000474691 DGKBQ9Y6T7 804 aa13.9□□□□□ -0.18
EPCAM-205ENST00000474691 RNF215Q9Y6U7 377 aa13.9□□□□□ -0.18
EPCAM-205ENST00000474691 ZNF462Q96JM2 2506 aa13.9□□□□□ -0.18
EPCAM-205ENST00000474691 FLNBO75369 2602 aaKnown RBP13.89□□□□□ -0.19
EPCAM-205ENST00000474691 TEX33O43247 280 aa13.89□□□□□ -0.19
EPCAM-205ENST00000474691 EEF1GP26641 437 aaKnown RBP13.89□□□□□ -0.19
EPCAM-205ENST00000474691 ALDH4A1P30038 563 aa13.89□□□□□ -0.19
EPCAM-205ENST00000474691 RFC1P35251 1148 aaPredicted RBP13.89□□□□□ -0.19
EPCAM-205ENST00000474691 SOX5P35711 763 aa13.89□□□□□ -0.19
EPCAM-205ENST00000474691 AIF1P55008 147 aa13.89□□□□□ -0.19
EPCAM-205ENST00000474691 HDAC4P56524 1084 aa13.89□□□□□ -0.19
EPCAM-205ENST00000474691 ACOX1Q15067 660 aa13.89□□□□□ -0.19
EPCAM-205ENST00000474691 DNAJC24Q6P3W2 148 aa13.89□□□□□ -0.19
EPCAM-205ENST00000474691 VASH2Q86V25 355 aa13.89□□□□□ -0.19
EPCAM-205ENST00000474691 ZFAND4Q86XD8 727 aa13.89□□□□□ -0.19
EPCAM-205ENST00000474691 PYROXD2Q8N2H3 581 aa13.89□□□□□ -0.19
EPCAM-205ENST00000474691 EXD3Q8N9H8 876 aa13.89□□□□□ -0.19
EPCAM-205ENST00000474691 ANKRD20A12PQ8NF67 263 aa13.89□□□□□ -0.19
EPCAM-205ENST00000474691 GPR156Q8NFN8 814 aa13.89□□□□□ -0.19
EPCAM-205ENST00000474691 PDXPQ96GD0 296 aa13.89□□□□□ -0.19
EPCAM-205ENST00000474691 CINPQ9BW66 212 aaPredicted RBP13.89□□□□□ -0.19
EPCAM-205ENST00000474691 NAA15Q9BXJ9 866 aaKnown RBP13.89□□□□□ -0.19
EPCAM-205ENST00000474691 MAGEB5Q9BZ81 275 aa13.89□□□□□ -0.19
EPCAM-205ENST00000474691 WDR26Q9H7D7 661 aa13.89□□□□□ -0.19
EPCAM-205ENST00000474691 CYP4F12Q9HCS2 524 aa13.89□□□□□ -0.19
EPCAM-205ENST00000474691 NLRC4Q9NPP4 1024 aa13.89□□□□□ -0.19
EPCAM-205ENST00000474691 FAM207AQ9NSI2 230 aaPredicted RBP13.89□□□□□ -0.19
EPCAM-205ENST00000474691 TAB2Q9NYJ8 693 aa13.89□□□□□ -0.19
EPCAM-205ENST00000474691 APPL1Q9UKG1 709 aa13.89□□□□□ -0.19
EPCAM-205ENST00000474691 RP1P56715 2156 aa13.89□□□□□ -0.19
EPCAM-205ENST00000474691 DOCK4Q8N1I0 1966 aa13.89□□□□□ -0.19
EPCAM-205ENST00000474691 A0A1W2PQC6 194 aa13.88□□□□□ -0.19
EPCAM-205ENST00000474691 CFAP69A5D8W1 941 aa13.88□□□□□ -0.19
EPCAM-205ENST00000474691 GOLGA6CA6NDK9 693 aa13.88□□□□□ -0.19
EPCAM-205ENST00000474691 GOLGA6BA6NDN3 693 aa13.88□□□□□ -0.19
EPCAM-205ENST00000474691 NUDT21O43809 227 aaKnown RBP13.88□□□□□ -0.19
EPCAM-205ENST00000474691 RECQL5O94762 991 aaPredicted RBP13.88□□□□□ -0.19
EPCAM-205ENST00000474691 PRKCGP05129 697 aa13.88□□□□□ -0.19
EPCAM-205ENST00000474691 FAM87AP0C7U9 286 aa13.88□□□□□ -0.19
EPCAM-205ENST00000474691 GOLGA6DP0CG33 693 aa13.88□□□□□ -0.19
EPCAM-205ENST00000474691 NOP2P46087 812 aaKnown RBP13.88□□□□□ -0.19
EPCAM-205ENST00000474691 KIAA1024LP59773 190 aa13.88□□□□□ -0.19
EPCAM-205ENST00000474691 FMO1Q01740 532 aa13.88□□□□□ -0.19
EPCAM-205ENST00000474691 ILF3Q12906 894 aaKnown RBP eCLIP13.88□□□□□ -0.19
EPCAM-205ENST00000474691 CYTH1Q15438 398 aa13.88□□□□□ -0.19
EPCAM-205ENST00000474691 LINC00303Q3SY05 128 aa13.88□□□□□ -0.19
EPCAM-205ENST00000474691 TCP11X2Q5H9J9 407 aa13.88□□□□□ -0.19
EPCAM-205ENST00000474691 CERCAMQ5T4B2 595 aa13.88□□□□□ -0.19
EPCAM-205ENST00000474691 SPECC1LQ69YQ0 1117 aa13.88□□□□□ -0.19
EPCAM-205ENST00000474691 WDR59Q6PJI9 974 aa13.88□□□□□ -0.19
EPCAM-205ENST00000474691 SPRED1Q7Z699 444 aa13.88□□□□□ -0.19
EPCAM-205ENST00000474691 SRLQ86TD4 932 aa13.88□□□□□ -0.19
EPCAM-205ENST00000474691 CAMK1DQ8IU85 385 aa13.88□□□□□ -0.19
EPCAM-205ENST00000474691 IL22RA1Q8N6P7 574 aa13.88□□□□□ -0.19
EPCAM-205ENST00000474691 C3orf20Q8ND61 904 aa13.88□□□□□ -0.19
EPCAM-205ENST00000474691 CENPIQ92674 756 aaPredicted RBP13.88□□□□□ -0.19
EPCAM-205ENST00000474691 GSDMCQ9BYG8 508 aa13.88□□□□□ -0.19
EPCAM-205ENST00000474691 SP110Q9HB58 689 aa13.88□□□□□ -0.19
EPCAM-205ENST00000474691 GOLGA6AQ9NYA3 693 aa13.88□□□□□ -0.19
EPCAM-205ENST00000474691 LHX3Q9UBR4 397 aa13.88□□□□□ -0.19
EPCAM-205ENST00000474691 NOCTQ9UK39 431 aaKnown RBP13.88□□□□□ -0.19
EPCAM-205ENST00000474691 FZD10Q9ULW2 581 aa13.88□□□□□ -0.19
EPCAM-205ENST00000474691 SIGLEC16A6NMB1 481 aa13.87□□□□□ -0.19
EPCAM-205ENST00000474691 STMND1H3BQB6 276 aa13.87□□□□□ -0.19
EPCAM-205ENST00000474691 TNFRSF10CO14798 259 aa13.87□□□□□ -0.19
EPCAM-205ENST00000474691 CCP110O43303 1012 aa13.87□□□□□ -0.19
EPCAM-205ENST00000474691 CPNE6O95741 557 aa13.87□□□□□ -0.19
EPCAM-205ENST00000474691 HTR7P34969 479 aa13.87□□□□□ -0.19
EPCAM-205ENST00000474691 MMP12P39900 470 aa13.87□□□□□ -0.19
EPCAM-205ENST00000474691 NDST2P52849 883 aa13.87□□□□□ -0.19
EPCAM-205ENST00000474691 NFKB2Q00653 900 aa13.87□□□□□ -0.19
EPCAM-205ENST00000474691 ZFP36L1Q07352 338 aaKnown RBP13.87□□□□□ -0.19
EPCAM-205ENST00000474691 AGERQ15109 404 aa13.87□□□□□ -0.19
EPCAM-205ENST00000474691 ARTNQ5T4W7 220 aa13.87□□□□□ -0.19
EPCAM-205ENST00000474691 UMODL1-AS1Q8N2C9 162 aa13.87□□□□□ -0.19
EPCAM-205ENST00000474691 OR1E3Q8WZA6 343 aa13.87□□□□□ -0.19
EPCAM-205ENST00000474691 CELF6Q96J87 481 aaKnown RBP13.87□□□□□ -0.19
EPCAM-205ENST00000474691 MCEEQ96PE7 176 aa13.87□□□□□ -0.19
EPCAM-205ENST00000474691 KLC2Q9H0B6 622 aa13.87□□□□□ -0.19
EPCAM-205ENST00000474691 TMEM168Q9H0V1 697 aa13.87□□□□□ -0.19
EPCAM-205ENST00000474691 VPS16Q9H269 839 aa13.87□□□□□ -0.19
EPCAM-205ENST00000474691 CARS2Q9HA77 564 aaKnown RBP13.87□□□□□ -0.19
EPCAM-205ENST00000474691 MRPL40Q9NQ50 206 aaKnown RBP13.87□□□□□ -0.19
EPCAM-205ENST00000474691 PHPT1Q9NRX4 125 aaPredicted RBP13.87□□□□□ -0.19
EPCAM-205ENST00000474691 STARD5Q9NSY2 213 aa13.87□□□□□ -0.19
EPCAM-205ENST00000474691 KCTD5Q9NXV2 234 aa13.87□□□□□ -0.19
EPCAM-205ENST00000474691 PCDHGA4Q9Y5G9 962 aa13.87□□□□□ -0.19
EPCAM-205ENST00000474691 TSPAN11A1L157 253 aa13.86□□□□□ -0.19
EPCAM-205ENST00000474691 WASH4PA8MWX3 477 aa13.86□□□□□ -0.19
EPCAM-205ENST00000474691 A8MX80 341 aa13.86□□□□□ -0.19
EPCAM-205ENST00000474691 DFFAO00273 331 aa13.86□□□□□ -0.19
EPCAM-205ENST00000474691 EEF2KO00418 725 aaKnown RBP13.86□□□□□ -0.19
EPCAM-205ENST00000474691 NOBOXO60393 691 aa13.86□□□□□ -0.19
EPCAM-205ENST00000474691 CCDC172P0C7W6 258 aa13.86□□□□□ -0.19
EPCAM-205ENST00000474691 CSTF2P33240 577 aaKnown RBP eCLIP13.86□□□□□ -0.19
EPCAM-205ENST00000474691 SCNN1BP51168 640 aa13.86□□□□□ -0.19
EPCAM-205ENST00000474691 RENBPP51606 427 aa13.86□□□□□ -0.19
EPCAM-205ENST00000474691 ZNF143P52747 638 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms