RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 DPPA4Q7L190 304 aa13.82□□□□□ -0.2
USF1-205ENST00000473969 PTAR1Q7Z6K3 402 aaPredicted RBP13.82□□□□□ -0.2
USF1-205ENST00000473969 ZSWIM9Q86XI8 627 aa13.82□□□□□ -0.2
USF1-205ENST00000473969 CNTD1Q8N815 330 aa13.82□□□□□ -0.2
USF1-205ENST00000473969 LPCAT1Q8NF37 534 aa13.82□□□□□ -0.2
USF1-205ENST00000473969 ARRDC2Q8TBH0 407 aa13.82□□□□□ -0.2
USF1-205ENST00000473969 RMDN1Q96DB5 314 aa13.82□□□□□ -0.2
USF1-205ENST00000473969 SCRN2Q96FV2 425 aa13.82□□□□□ -0.2
USF1-205ENST00000473969 TEKT5Q96M29 485 aa13.82□□□□□ -0.2
USF1-205ENST00000473969 RBM15Q96T37 977 aaKnown RBP eCLIP13.82□□□□□ -0.2
USF1-205ENST00000473969 DNAAF2Q9NVR5 837 aaKnown RBP13.82□□□□□ -0.2
USF1-205ENST00000473969 KCTD5Q9NXV2 234 aa13.82□□□□□ -0.2
USF1-205ENST00000473969 RPL26L1Q9UNX3 145 aaKnown RBP13.82□□□□□ -0.2
USF1-205ENST00000473969 CHKBQ9Y259 395 aa13.82□□□□□ -0.2
USF1-205ENST00000473969 CA5BQ9Y2D0 317 aa13.82□□□□□ -0.2
USF1-205ENST00000473969 TNRC6BQ9UPQ9 1833 aaKnown RBP13.82□□□□□ -0.2
USF1-205ENST00000473969 WNT9AO14904 365 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 KCNN4O15554 427 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 SPINT1O43278 529 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 WNT1P04628 370 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 CTPS1P17812 591 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 RBL1P28749 1068 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 CTSKP43235 329 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 RABIFP47224 123 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 ARRB1P49407 418 aaPredicted RBP13.81□□□□□ -0.2
USF1-205ENST00000473969 CLDN2P57739 230 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 NXPH1P58417 271 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 SKOR1P84550 965 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 SEMG2Q02383 582 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 SLC14A1Q13336 389 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 FGL2Q14314 439 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 PRPSAP1Q14558 356 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 ACOX1Q15067 660 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 DENND2CQ68D51 928 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 ITPRIPL1Q6GPH6 555 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 TMEM145Q8NBT3 493 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 OR2I1PQ8NGU4 316 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 MAIP1Q8WWC4 291 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 SPOCK2Q92563 424 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 LRRC45Q96CN5 670 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 IMP4Q96G21 291 aaKnown RBP13.81□□□□□ -0.2
USF1-205ENST00000473969 NSMCE3Q96MG7 304 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 TDRD1Q9BXT4 1180 aaKnown RBP13.81□□□□□ -0.2
USF1-205ENST00000473969 CARD9Q9H257 536 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 SLC32A1Q9H598 525 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 B4GALT6Q9UBX8 382 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 RSPH14Q9UHP6 348 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 COQ6Q9Y2Z9 468 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 SHROOM3Q8TF72 1996 aa13.81□□□□□ -0.2
USF1-205ENST00000473969 H0Y8X5 98 aa13.8□□□□□ -0.2
USF1-205ENST00000473969 TOR1BO14657 336 aa13.8□□□□□ -0.2
USF1-205ENST00000473969 YKT6O15498 198 aa13.8□□□□□ -0.2
USF1-205ENST00000473969 KIF5CO60282 957 aa13.8□□□□□ -0.2
USF1-205ENST00000473969 FZD6O60353 706 aa13.8□□□□□ -0.2
USF1-205ENST00000473969 PDHA1P08559 390 aa13.8□□□□□ -0.2
USF1-205ENST00000473969 KCNA4P22459 653 aa13.8□□□□□ -0.2
USF1-205ENST00000473969 CCT8P50990 548 aa13.8□□□□□ -0.2
USF1-205ENST00000473969 THOP1P52888 689 aa13.8□□□□□ -0.2
USF1-205ENST00000473969 WASHC5Q12768 1159 aa13.8□□□□□ -0.2
USF1-205ENST00000473969 PCSK7Q16549 785 aa13.8□□□□□ -0.2
USF1-205ENST00000473969 LIPIQ6XZB0 460 aa13.8□□□□□ -0.2
USF1-205ENST00000473969 KYAT3Q6YP21 454 aaKnown RBP13.8□□□□□ -0.2
USF1-205ENST00000473969 GCNT7Q6ZNI0 430 aa13.8□□□□□ -0.2
USF1-205ENST00000473969 Q6ZSR6 202 aa13.8□□□□□ -0.2
USF1-205ENST00000473969 KDELC2Q7Z4H8 507 aa13.8□□□□□ -0.2
USF1-205ENST00000473969 OR13H1Q8NG92 308 aa13.8□□□□□ -0.2
USF1-205ENST00000473969 PIH1D2Q8WWB5 315 aa13.8□□□□□ -0.2
USF1-205ENST00000473969 ELF4Q99607 663 aaPredicted RBP13.8□□□□□ -0.2
USF1-205ENST00000473969 FAM118BQ9BPY3 351 aa13.8□□□□□ -0.2
USF1-205ENST00000473969 HERPUD2Q9BSE4 406 aa13.8□□□□□ -0.2
USF1-205ENST00000473969 MLPHQ9BV36 600 aaPredicted RBP13.8□□□□□ -0.2
USF1-205ENST00000473969 FRMD8P1Q9BZ68 369 aaPredicted RBP13.8□□□□□ -0.2
USF1-205ENST00000473969 KCNF1Q9H3M0 494 aa13.8□□□□□ -0.2
USF1-205ENST00000473969 TM7SF3Q9NS93 570 aa13.8□□□□□ -0.2
USF1-205ENST00000473969 TRMT1Q9NXH9 659 aaKnown RBP13.8□□□□□ -0.2
USF1-205ENST00000473969 DLL3Q9NYJ7 618 aa13.8□□□□□ -0.2
USF1-205ENST00000473969 FAM153AQ9UHL3 310 aa13.8□□□□□ -0.2
USF1-205ENST00000473969 PPIL1Q9Y3C6 166 aa13.8□□□□□ -0.2
USF1-205ENST00000473969 USP34Q70CQ2 3546 aa13.8□□□□□ -0.2
USF1-205ENST00000473969 A0A0J9YYE9 177 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 PSMD11O00231 422 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 RAD51BO15315 384 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 PMPCBO75439 489 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 RECQL5O94762 991 aaPredicted RBP13.79□□□□□ -0.2
USF1-205ENST00000473969 HEXIM1O94992 359 aaKnown RBP13.79□□□□□ -0.2
USF1-205ENST00000473969 TRBC1P01850 177 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 ALPIP09923 528 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 ZNF883P0CG24 379 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 ZNF30P17039 623 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 NFKB1P19838 968 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 HNF1BP35680 557 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 BNC1Q01954 994 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 CDK18Q07002 472 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 PTK2BQ14289 1009 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 SLC14A2Q15849 920 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 ZNF423Q2M1K9 1284 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 INAVAQ3KP66 663 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 ZNF569Q5MCW4 686 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 ABI3BPQ7Z7G0 1075 aa13.79□□□□□ -0.2
USF1-205ENST00000473969 SLC13A5Q86YT5 568 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms