RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 CLDN2P57739 230 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 KRTAP10-11P60412 298 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 ROR1Q01973 937 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 GHRHRQ02643 423 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 TNFAIP1Q13829 316 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 ARHGEF6Q15052 776 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 ASTE1Q2TB18 679 aaPredicted RBP4.38□□□□□ -1.71
BRCA1-212ENST00000473961 RPUSD3Q6P087 351 aaKnown RBP4.38□□□□□ -1.71
BRCA1-212ENST00000473961 LCTLQ6UWM7 567 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 CRELD2Q6UXH1 353 aaPredicted RBP4.38□□□□□ -1.71
BRCA1-212ENST00000473961 SEPT14Q6ZU15 432 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 HIST3H2AQ7L7L0 130 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 PTF1AQ7RTS3 328 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 KDELC2Q7Z4H8 507 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 MRGPRGQ86SM5 289 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 DHX40Q8IX18 779 aaKnown RBP4.38□□□□□ -1.71
BRCA1-212ENST00000473961 C8orf58Q8NAV2 365 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 MCPH1Q8NEM0 835 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 BEST2Q8NFU1 509 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 CMASQ8NFW8 434 aaPredicted RBP4.38□□□□□ -1.71
BRCA1-212ENST00000473961 NUDCD1Q96RS6 583 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 SEPT5Q99719 369 aaPredicted RBP4.38□□□□□ -1.71
BRCA1-212ENST00000473961 IFIH1Q9BYX4 1025 aaKnown RBP4.38□□□□□ -1.71
BRCA1-212ENST00000473961 GLIS2Q9BZE0 524 aaPredicted RBP4.38□□□□□ -1.71
BRCA1-212ENST00000473961 EDEM3Q9BZQ6 932 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 SIL1Q9H173 461 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 HRH4Q9H3N8 390 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 PLK3Q9H4B4 646 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 MAGEE1Q9HCI5 957 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 SEMA4GQ9NTN9 838 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 CWC15Q9P013 229 aaKnown RBP4.38□□□□□ -1.71
BRCA1-212ENST00000473961 ARPP21Q9UBL0 812 aaPredicted RBP4.38□□□□□ -1.71
BRCA1-212ENST00000473961 NDRG3Q9UGV2 375 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 UTS2RQ9UKP6 389 aa4.38□□□□□ -1.71
BRCA1-212ENST00000473961 AGO2Q9UKV8 859 aaKnown RBP4.38□□□□□ -1.71
BRCA1-212ENST00000473961 EXO1Q9UQ84 846 aaKnown RBP4.38□□□□□ -1.71
BRCA1-212ENST00000473961 FAM237AA0A1B0GTK4 181 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 hCG_1809904A0A1W2PP81 198 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 A0A1W2PPE2 198 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 A0A1W2PR64 198 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 LINC01548A6NM66 108 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 HSPB2A8KAH6 182 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 MASP2O00187 686 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 AVILO75366 819 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 TPPPO94811 219 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 MYBL1P10243 752 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 ETFAP13804 333 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 SRD5A1P18405 259 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 CERS1P27544 350 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 CHATP28329 748 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 CTNNA1P35221 906 aaKnown RBP4.37□□□□□ -1.71
BRCA1-212ENST00000473961 PRCPP42785 496 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 CLCN5P51795 746 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 PMS2P54278 862 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 ELLP55199 621 aaPredicted RBP4.37□□□□□ -1.71
BRCA1-212ENST00000473961 MRPS5P82675 430 aaKnown RBP4.37□□□□□ -1.71
BRCA1-212ENST00000473961 SLC10A2Q12908 348 aaPredicted RBP4.37□□□□□ -1.71
BRCA1-212ENST00000473961 BAATQ14032 418 aaPredicted RBP4.37□□□□□ -1.71
BRCA1-212ENST00000473961 HSPB2Q16082 182 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 KYNUQ16719 465 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 ALG11Q2TAA5 492 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 COL28A1Q2UY09 1125 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 CXorf66Q5JRM2 361 aaPredicted RBP4.37□□□□□ -1.71
BRCA1-212ENST00000473961 ENTPD8Q5MY95 495 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 KIAA1614Q5VZ46 1190 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 ARMC3Q5W041 872 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 DPY19L2P1Q6NXN4 242 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 ARHGEF25Q86VW2 580 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 SCML4Q8N228 414 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 LRRC57Q8N9N7 239 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 SCCPDHQ8NBX0 429 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 SEMA6DQ8NFY4 1073 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 BICD2Q8TD16 824 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 ZKSCAN4Q969J2 545 aaPredicted RBP4.37□□□□□ -1.71
BRCA1-212ENST00000473961 ATP6V1E2Q96A05 226 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 SLC22A18Q96BI1 424 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 PABPC5Q96DU9 382 aaKnown RBP4.37□□□□□ -1.71
BRCA1-212ENST00000473961 CRAMP1Q96RY5 1269 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 SH2D3AQ9BRG2 576 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 ZCCHC17Q9NP64 241 aaKnown RBP4.37□□□□□ -1.71
BRCA1-212ENST00000473961 PFDN4Q9NQP4 134 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 ARHGEF38Q9NXL2 777 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 ANKRD10Q9NXR5 420 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 COPG2Q9UBF2 871 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 A3GALT2U3KPV4 340 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 WDR17Q8IZU2 1322 aa4.37□□□□□ -1.71
BRCA1-212ENST00000473961 A0A0U1RQF3 1178 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 A6NL46 340 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 ADAM20O43506 726 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 MITFO75030 526 aaPredicted RBP4.36□□□□□ -1.71
BRCA1-212ENST00000473961 JRKO75564 520 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 NDUFB4O95168 129 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 TOP3BO95985 862 aaKnown RBP4.36□□□□□ -1.71
BRCA1-212ENST00000473961 TPOP07202 933 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 MMP2P08253 660 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 QDPRP09417 244 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 SCG2P13521 617 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 IL7RP16871 459 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 MYF6P23409 242 aa4.36□□□□□ -1.71
BRCA1-212ENST00000473961 MSH2P43246 934 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms